T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
*
BAD AVG GOOD
*
Cf_Contig1068_s : 99
gi|267844904|re : 99
cons : 99
Cf_Contig1068_s MDERGLQLAEDLVSAHYLAAGRESLQATARTLRSLIAQRRCPDVG
gi|267844904|re MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENG
cons *:...: .* ***. *: * *: :: : :* *: : :**: *
Cf_Contig1068_s LSDAVIQLLLRQLAAMDTNNFAAHVGGGEREGRVASALVRQRHFD
gi|267844904|re WDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYR
cons .::.::*:*::** **:*** .: * ************ :**:
Cf_Contig1068_s FTHGIGRSGDLASEQPKAAGSSLLYKLTNIMVLDLIRLAGAPSTA
gi|267844904|re FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVA
cons * ********::: ********** *:** :***:*:***. :.*
Cf_Contig1068_s AAVVVPMATGMTLALVLRCVAKTRVKERYVVWPRIDQKTALKCID
gi|267844904|re NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
cons ..********:*:* : : :.* * :*::*******:.:*.:
Cf_Contig1068_s SAGLLPLPVE----------------------GPAHVVCVLSTTS
gi|267844904|re TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTS
cons :**: *: :* ** ::*: ****
Cf_Contig1068_s CFAPRLPDNTVAIARYCKEHAIPYVVNNAYGVQSRRIMTRIDAAQ
gi|267844904|re CFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGA
cons *****:**. :* * :: **::********* : * *: .
Cf_Contig1068_s RLGRVDYVVQSSDKNFLVPVGGAVVTSSSAERCNAAAALYAGRAS
gi|267844904|re RVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRAS
cons *:**:* .*** ****:******:::. . . : : :*.****
Cf_Contig1068_s ASPIIDLFITALSLGRRGMQELWAERYRCRRRLVDQLCGFAKARG
gi|267844904|re ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN
cons *** :*::** **** .* ::* ** . * :*: :::* .
Cf_Contig1068_s EVV------------------------------------------
gi|267844904|re ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARV
cons * :
Cf_Contig1068_s ---------------------------------------------
gi|267844904|re VPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLF
cons
Cf_Contig1068_s ---------------------------------------------
gi|267844904|re IKRLDRCLKAVRKERSKESDDNYDKTEDVDIEEMALKLDNVLLDT
cons
Cf_Contig1068_s -----L
gi|267844904|re YQDASS
cons