T-COFFEE, Version_8.99(Fri Feb 18 08:27:45 CET 2011 - Revision 596)
Cedric Notredame
CPU TIME:0 sec.
SCORE=95
*
BAD AVG GOOD
*
contig_34_subse : 94
SPP00000038_1.0 : 94
cons : 95
contig_34_subse -----LNVNIGLLGHVDSGKTALAKALSSTAST
SPP00000038_1.0 MAGRRVNVNVGVLGHIDSGKTALARALSTTAST
cons :***:*:***:********:***:****
contig_34_subse AAFDKSPQSQSRGITLDLGFSACEV--------
SPP00000038_1.0 AAFDKQPQSRERGITLDLGFSCFSVPLPARLRS
cons *****.***:.**********. .*
contig_34_subse -------------------VQCTLVDCPGHASL
SPP00000038_1.0 SLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASL
cons :* ***********
contig_34_subse IRTVVGGAQIIDAMVLVIDATKGMQVQTAECLI
SPP00000038_1.0 IRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV
cons ***::******* *:****.*****.*:****:
contig_34_subse LGEVLAKPLVVVLNKMDAIQGASPAAKEAALAA
SPP00000038_1.0 IGQIACQKLVVVLNKIDLLPE---GKRQAAIDK
cons :*:: .: *******:* : . ::**:
contig_34_subse LKRKLQQVFRRTRWPTVAIVEVAAA--------
SPP00000038_1.0 MTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPE
cons :.:*:*:.:..*:: ..*: ***
contig_34_subse ---------------------------PFYMLV
SPP00000038_1.0 TEAPQGIPELIELLTSQISIPTRDPSGPFLMSV
cons ** * *
contig_34_subse DHCFAVRGQGTVFTGTVVAGVVRVGDTVLVPEL
SPP00000038_1.0 DHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL
cons ****:::*****:***:::* : :**:* :* *
contig_34_subse QTTRKVKGLQVFHKPVEMAQSGDRVGLCVAQFD
SPP00000038_1.0 KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFD
cons :..:***.:*:** *: * .***:*:**:***
contig_34_subse PTWMERGVLCSAASSGRALVSSSQLIARVHRVR
SPP00000038_1.0 PKLLERGLVCAPESLH----TVHAALISVEKIP
cons *. :***::*:. * : : *.::
contig_34_subse YHPLPCDTHTKFHITIGHATVMGTMRYFARPPR
SPP00000038_1.0 YFRGPLQTKAKFHITVGHETVMGRLMFFSPAP-
cons *. * :*::*****:** **** : :*: .*
contig_34_subse ANESLDVPGTGASFDPSIESTYVEE-LDDGVVA
SPP00000038_1.0 --DNFDQEPILDSFNFSQEYLFQEQYLSKDLTP
cons :.:* **: * * : *: *...:..
contig_34_subse SYTSTDTTASVPGRPLPVAPAEQDYYAVLLLER
SPP00000038_1.0 AVTDNDEADKKAGQATEGH-CPRQQWALVEFEK
cons : *..* : . .*:. . :: :*:: :*:
contig_34_subse PVLAAPGVSMIAMRLDVE-RENFCRIALAGTVC
SPP00000038_1.0 PVTCPRLCLVIGSRLDADIHTNTCRLAFHGILL
cons ** .. :*. ***.: : * **:*: * :
contig_34_subse ---------------------------------
SPP00000038_1.0 HGLEDRNYADSFLPRLKVYKLKHKHGLVERAMD
cons
contig_34_subse ---------------------------------
SPP00000038_1.0 DYSVIGRSLFKKETNIQLFVGLKVHLSTGELGI
cons
contig_34_subse ---------------------------------
SPP00000038_1.0 IDSAFGQSGKFKIHIPGGLSPESKKILTPALKK
cons
contig_34_subse ---------------------------------
SPP00000038_1.0 RARAGRGEATRQEESAERSEPSQHVVLSLTFKR
cons
contig_34_subse ------------H
SPP00000038_1.0 YVFDTHKRMVQSP
cons