TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Fep15_danio_rerio (138 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 28 2.1 gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 27 3.6 gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 27 3.6 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 26 7.9 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 28.1 bits (61), Expect = 2.1 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -1 Query: 71 DSGEDKNPRLIFYNDKDEEVKVVPVKK 97 D+ +KN + +Y+D+DEE+ + KK Sbjct: 8060246 DNNNNKNENVNYYSDEDEEIDNIETKK 8060166 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +2 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 349124 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 349243 Score = 27.3 bits (59), Expect = 3.6 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -2 Query: 5 LVALLALCATGRTAENLS---ESTTDQDKLVIARGKLVAPSVVGXSIKKMPELYNFLMER 61 L +L TGR + LS + T D V+A +V + K +Y+ L+++ Sbjct: 7103059 LKGVLLTGLTGRGVDLLSNYIDRTCDIQTAVLAISLVVPKFFRDKRVSKWSSIYSDLLDQ 7102880 Query: 62 WALYH 66 W L+H Sbjct: 7102879 WELWH 7102865 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = -1 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 307241 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 307122 Score = 26.6 bits (57), Expect = 6.1 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVP 94 ++++ + N+EY + K +FY DKD++ K+VP Sbjct: 373646 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP 373545 Score = 26.2 bits (56), Expect = 7.9 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +1 Query: 65 YHNLEYDSGEDKNPRLIFYN 84 Y+NL YDS + N + +F+N Sbjct: 2276068 YYNLNYDSNYNNNNKKLFFN 2276127 Score = 26.2 bits (56), Expect = 7.9 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = -3 Query: 65 YHNLEYDSGEDKNPRLIFYN 84 Y+NL YDS + N + +F+N Sbjct: 3755718 YYNLNYDSNYNNNNKKLFFN 3755659 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = -1 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 6156971 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 6156852 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = -2 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 2646970 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 2646851 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +1 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 6356368 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 6356487 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = -3 Query: 58 LMERWALYHNLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKAD 101 ++++ + N+EY + K +FY DKD++ K+VP K++ D Sbjct: 4919820 ILDKQYVVENVEYGTATIKE---VFYIDKDKKKKLVP-KRLSED 4919701 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 26.2 bits (56), Expect = 7.9 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +3 Query: 87 DEEVKVVPVKKMKADEISSLLDSLGFYKRSEKGEEV----PEEFKHF 129 D+EV P KK DE++ L +KR+ EV P F+HF Sbjct: 89580 DDEVDEKPKKKNPLDELAPSTFVLDEFKRTYSNNEVSMSIPWFFEHF 89720 Score = 26.2 bits (56), Expect = 7.9 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -2 Query: 67 NLEYDSGEDKNPRLIFYNDKDEEVKVVPVKKMKADE 102 N+EY+ E+ P D+DEE++ ++ K D+ Sbjct: 4741306 NIEYEDSENNAPATTGDEDEDEEIEYEEDEEGKVDD 4741199 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.316 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,991,949 Number of Sequences: 6 Number of extensions: 72694 Number of successful extensions: 272 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 162 Number of HSP's gapped (non-prelim): 185 length of query: 138 length of database: 11,314,357 effective HSP length: 90 effective length of query: 48 effective length of database: 11,313,817 effective search space: 543063216 effective search space used: 543063216 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)