TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Aureococcus anophagefferens (108 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325192331|emb|FR824456.1| Albugo laibachii Nc14, genomic cont... 30 0.21 gi|325181058|emb|FR824057.1| Albugo laibachii Nc14, genomic cont... 29 0.62 gi|325180196|emb|FR824050.1| Albugo laibachii Nc14, genomic cont... 28 1.4 gi|325180840|emb|FR824055.1| Albugo laibachii Nc14, genomic cont... 27 1.8 gi|325189233|emb|FR824251.1| Albugo laibachii Nc14, genomic cont... 27 1.8 gi|325183812|emb|FR824093.1| Albugo laibachii Nc14, genomic cont... 27 3.1 gi|325183931|emb|FR824095.1| Albugo laibachii Nc14, genomic cont... 27 3.1 gi|325185988|emb|FR824141.1| Albugo laibachii Nc14, genomic cont... 26 4.0 gi|325183108|emb|FR824082.1| Albugo laibachii Nc14, genomic cont... 26 5.3 gi|325191845|emb|FR824411.1| Albugo laibachii Nc14, genomic cont... 26 5.3 gi|325192665|emb|FR824497.1| Albugo laibachii Nc14, genomic cont... 26 5.3 gi|325194946|emb|FR825743.1| Albugo laibachii Nc14, genomic cont... 26 5.3 gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325180061|emb|FR824049.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325181158|emb|FR824058.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325183585|emb|FR824089.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325183627|emb|FR824090.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325183994|emb|FR824096.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325185503|emb|FR824129.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325189686|emb|FR824270.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325192083|emb|FR824429.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325193479|emb|FR824673.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325194947|emb|FR825744.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325195073|emb|FR825867.1| Albugo laibachii Nc14, genomic cont... 25 6.9 gi|325186443|emb|FR824153.1| Albugo laibachii Nc14, genomic cont... 25 9.0 >gi|325192331|emb|FR824456.1| Albugo laibachii Nc14, genomic contig CONTIG_413_NC14_v4_20047_246 Length = 20047 Score = 30.4 bits (67), Expect = 0.21 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Frame = +1 Query: 10 ETLKCGLCERLSDYHLETLLTD-CLQCCIKEEEFKH-EKYPTAILEVCECNLARFPQVQA 67 E ++C C+ +L+ D CLQCC ++E +K ++ + + C L V+ Sbjct: 13873 ECVECKHCQTPGTPRTYSLVPDLCLQCCSRQERWKSARQFTKPLADKCPICLETC-NVKE 14049 Query: 68 FVHKDMARQFPQVALKDADFKTKEVLSV 95 +H D ++ F+ K+ L V Sbjct: 14050 AIHCDACERWTHSTCDPMAFRDKDALYV 14133 >gi|325181058|emb|FR824057.1| Albugo laibachii Nc14, genomic contig CONTIG_12_NC14_v4_215731_238 Length = 215731 Score = 28.9 bits (63), Expect = 0.62 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = -3 Query: 49 TAILEVCECNLARFPQVQAFVHKDMARQFP--------QVALKDADFKTKEVLS 94 T E C CNL R P + A K +A QF Q L DFK +LS Sbjct: 175310 TFCTEFCVCNLIRSPTMAALAAKHLAVQFGTLSGILSIQHRLVYIDFKVDTILS 175149 Score = 25.0 bits (53), Expect = 9.0 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 Query: 32 CLQCCIKEEEFKHEK 46 C+QCC E E KH + Sbjct: 183692 CIQCCRSESECKHAR 183648 >gi|325180196|emb|FR824050.1| Albugo laibachii Nc14, genomic contig CONTIG_5_NC14_v4_277187_236 Length = 277187 Score = 27.7 bits (60), Expect = 1.4 Identities = 14/68 (20%), Positives = 24/68 (35%) Frame = -3 Query: 36 CIKEEEFKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQFPQVALKDADFKTKEVLSV 95 C K ++ P + L++C CN+ +H P ++ + Sbjct: 238434 CFHRTRHKWQRCPVSTLDICLCNVT--------LHNTYRFPVPNTIYSKKNYYSSRQHDA 238279 Query: 96 EKWDTDTL 103 KW T TL Sbjct: 238278 NKWKTPTL 238255 >gi|325180840|emb|FR824055.1| Albugo laibachii Nc14, genomic contig CONTIG_10_NC14_v4_229526_245 Length = 229526 Score = 27.3 bits (59), Expect = 1.8 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = -3 Query: 3 KAAGFNPETLKCGLCERLSDYHLETLLTDCLQCCIKEEEFKHEKYPTAILEVC 55 KAAGF +CE + YH + + + LQ + F IL +C Sbjct: 91320 KAAGFGTNASTSVMCESIEPYHAKRKMNNLLQMILGRHYFHAS---LLILNIC 91171 >gi|325189233|emb|FR824251.1| Albugo laibachii Nc14, genomic contig CONTIG_206_NC14_v4_46149_263 Length = 46149 Score = 27.3 bits (59), Expect = 1.8 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +2 Query: 46 KYPTAILEVCECNLARFPQVQAFVHKDMARQFPQVALKDADFKTKEVLSVEKWDTDT 102 K PTA L + C++ V+A VH++ A + + K +E+ ++ DT+T Sbjct: 15380 KLPTADLGIAACHVV*ETWVRAAVHRE--------AAQSTESKLQEIADCQRIDTNT 15526 >gi|325183812|emb|FR824093.1| Albugo laibachii Nc14, genomic contig CONTIG_48_NC14_v4_120044_121 Length = 120044 Score = 26.6 bits (57), Expect = 3.1 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 Query: 23 YHLETLLTDCLQCCIKEEEF 42 YH L DCLQC I+ F Sbjct: 48160 YHFRIELADCLQCIIEPSRF 48101 >gi|325183931|emb|FR824095.1| Albugo laibachii Nc14, genomic contig CONTIG_50_NC14_v4_115337_117 Length = 115337 Score = 26.6 bits (57), Expect = 3.1 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 23 YHLETLLTDCLQCCIKEEEF 42 YH L DCLQC I+ F Sbjct: 72609 YHFRIELADCLQCIIEPSRF 72668 >gi|325185988|emb|FR824141.1| Albugo laibachii Nc14, genomic contig CONTIG_96_NC14_v4_80833_226 Length = 80833 Score = 26.2 bits (56), Expect = 4.0 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Frame = -3 Query: 23 YHLETLLTDC------LQCCIKEEEFKHEKYPTAILEVCE 56 Y LETLL DC L CCI E F+ + + ++ C+ Sbjct: 74711 YALETLLVDCYFTADSLSCCI--ERFRPQWFLPSLQSDCQ 74598 >gi|325183108|emb|FR824082.1| Albugo laibachii Nc14, genomic contig CONTIG_37_NC14_v4_136865_253 Length = 136865 Score = 25.8 bits (55), Expect = 5.3 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 10/38 (26%) Frame = -3 Query: 3 KAAGFNPETLKCGLCERL----------SDYHLETLLT 30 K AG P CGLC R + H+E LLT Sbjct: 17421 KYAGVTPAVCNCGLCHRAPSLLSPSHRHQNVHIEKLLT 17308 >gi|325191845|emb|FR824411.1| Albugo laibachii Nc14, genomic contig CONTIG_366_NC14_v4_23856_252 Length = 23856 Score = 25.8 bits (55), Expect = 5.3 Identities = 17/61 (27%), Positives = 23/61 (37%) Frame = +2 Query: 17 CERLSDYHLETLLTDCLQCCIKEEEFKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQ 76 C S YH E L+ DCL+ +L EC F + A H D ++ Sbjct: 4817 CSNYSSYHDELLIGDCLE----------------LLWDLECAQRVFVTINASGHDDTSKA 4948 Query: 77 F 77 F Sbjct: 4949 F 4951 >gi|325192665|emb|FR824497.1| Albugo laibachii Nc14, genomic contig CONTIG_454_NC14_v4_16432_283 Length = 16432 Score = 25.8 bits (55), Expect = 5.3 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = +2 Query: 24 HLETLLTDCLQCCIKEEEFKH 44 H+ L +C+QCC++ + H Sbjct: 6563 HVWNKLVNCIQCCVRHQNLIH 6625 >gi|325194946|emb|FR825743.1| Albugo laibachii Nc14, genomic contig CONTIG_2754_NC14_v4_597_262 Length = 597 Score = 25.8 bits (55), Expect = 5.3 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = +1 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D+ +KT + Sbjct: 1 FAHKESVRLARQYHHVALMDSTYKTNK 81 >gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic contig CONTIG_3_NC14_v4_366484_228 Length = 366484 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +2 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 313826 FAHKESVRLARQYHHVALMDCTYKTNK 313906 >gi|325180061|emb|FR824049.1| Albugo laibachii Nc14, genomic contig CONTIG_4_NC14_v4_277804_239 Length = 277804 Score = 25.4 bits (54), Expect = 6.9 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +2 Query: 37 IKEEEFKHEKYPTAILEVCECNLA----RFPQVQAFVHKDMARQFPQVALKDA--DFKTK 90 I+ E+ K E+ T + E A R +AF+ KD+A Q P+ L+D DF T+ Sbjct: 56786 IQIEKIKEEQL-TRLCRAFEARTASVKMRKADFKAFIMKDLAFQIPENELEDVLLDFDTE 56962 Query: 91 EVLSVEKWDTDTLIDFF 107 +E D ++++F Sbjct: 56963 NRGFLE---LDEIVEWF 57004 Score = 25.4 bits (54), Expect = 6.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -1 Query: 2 CKAAGFNPETLKCGLCER 19 C+A GF+P T GLC R Sbjct: 31399 CRAGGFHPCTFINGLCNR 31346 >gi|325181158|emb|FR824058.1| Albugo laibachii Nc14, genomic contig CONTIG_13_NC14_v4_214234_139 Length = 214234 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +2 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 214142 FAHKESVRLARQYHHVALMDCTYKTNK 214222 >gi|325183585|emb|FR824089.1| Albugo laibachii Nc14, genomic contig CONTIG_44_NC14_v4_128736_234 Length = 128736 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +2 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 81992 FAHKESVRLARQYHHVALMDCTYKTNK 82072 >gi|325183627|emb|FR824090.1| Albugo laibachii Nc14, genomic contig CONTIG_45_NC14_v4_127190_235 Length = 127190 Score = 25.4 bits (54), Expect = 6.9 Identities = 15/53 (28%), Positives = 23/53 (43%) Frame = -3 Query: 18 ERLSDYHLETLLTDCLQCCIKEEEFKHEKYPTAILEVCECNLARFPQVQAFVH 70 E SD HL+ +L+ + E PT+ E+ L +VQ F+H Sbjct: 80082 ENASDLHLDFMLSSNA----RPAELSFSVSPTSFKEISTVTLPAHARVQVFLH 79936 >gi|325183994|emb|FR824096.1| Albugo laibachii Nc14, genomic contig CONTIG_51_NC14_v4_114616_235 Length = 114616 Score = 25.4 bits (54), Expect = 6.9 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 34 QCCIKEEEFKHEKYPTAILEVCE 56 +CCIK K+ K+ AIL C+ Sbjct: 98933 KCCIKANNIKNIKHRLAILPFCK 99001 >gi|325185503|emb|FR824129.1| Albugo laibachii Nc14, genomic contig CONTIG_84_NC14_v4_89591_183 Length = 89591 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +1 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 71542 FAHKESVRLARQYHHVALMDCTYKTNK 71622 Score = 25.0 bits (53), Expect = 9.0 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = -2 Query: 64 QVQAFVHKDMARQFPQVALKDADFKTKE 91 +++ ++ KDM + FPQ L+ A E Sbjct: 78661 KIRRYMQKDMQKSFPQAQLESASTTVSE 78578 >gi|325189686|emb|FR824270.1| Albugo laibachii Nc14, genomic contig CONTIG_225_NC14_v4_42981_195 Length = 42981 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +1 Query: 45 EKYPTAILEVCECNLARFPQVQAFVHKDMARQFPQVALKDA 85 E +PT + V +++ F QVQ+ + + RQ +DA Sbjct: 40603 ESHPTRVFVVVRMSISTFDQVQSRIKMQLKRQSMIPQARDA 40725 >gi|325192083|emb|FR824429.1| Albugo laibachii Nc14, genomic contig CONTIG_385_NC14_v4_22367_132 Length = 22367 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +1 Query: 45 EKYPTAILEVCECNLARFPQVQAFVHKDMARQFPQVALKDA 85 E +PT + V +++ F QVQ+ + + RQ +DA Sbjct: 19015 ESHPTRVFVVVRMSISTFDQVQSRIKMQLKRQSMIPQARDA 19137 >gi|325193479|emb|FR824673.1| Albugo laibachii Nc14, genomic contig CONTIG_691_NC14_v4_7575_304 Length = 7575 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = -1 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 5316 FAHKESVRLARQYHHVALMDCTYKTNK 5236 >gi|325194947|emb|FR825744.1| Albugo laibachii Nc14, genomic contig CONTIG_2755_NC14_v4_597_162 Length = 597 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = -1 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 597 FAHKESVRLARQYHHVALMDCTYKTNK 517 >gi|325195073|emb|FR825867.1| Albugo laibachii Nc14, genomic contig CONTIG_2909_NC14_v4_530_146 Length = 530 Score = 25.4 bits (54), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = -2 Query: 68 FVHKD---MARQFPQVALKDADFKTKE 91 F HK+ +ARQ+ VAL D +KT + Sbjct: 211 FAHKESVRLARQYHHVALMDCTYKTNK 131 >gi|325186443|emb|FR824153.1| Albugo laibachii Nc14, genomic contig CONTIG_108_NC14_v4_76717_240 Length = 76717 Score = 25.0 bits (53), Expect = 9.0 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -3 Query: 25 LETLLTDCLQCCIK-EEEFKHEKYPTAILEVC 55 L+ + + CL+ C + KH K+P I+ VC Sbjct: 21761 LQRISSSCLERCSRLYTSVKHRKWPVGIVIVC 21666 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.324 0.137 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,114,726 Number of Sequences: 3816 Number of extensions: 80011 Number of successful extensions: 609 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 609 length of query: 108 length of database: 10,913,379 effective HSP length: 82 effective length of query: 26 effective length of database: 10,600,467 effective search space: 275612142 effective search space used: 275612142 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 53 (25.0 bits)