T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=79
*
 BAD AVG GOOD
*
H.sapiens         :  75
B.taurus_V        :  76
M.musculus_V      :  76
A.franciscana_w   :  81
D.rerio_W         :  86
H.sapiens_W1      :  86
H.sapiens_W2      :  78
M.musculus_W2     :  79
cons              :  79

H.sapiens         MNNQARTPAPSSARTSTSVRAST------------------PTRT
B.taurus_V        MNNQPRTPAPTPARASTPVRGSTLHRTSIQVRTPTPGPDSGPTRI
M.musculus_V      MNNKARVPAPSSVRANTPARTPA----------------------
A.franciscana_w   M--------------------------------------------
D.rerio_W         MT-------------------------------------------
H.sapiens_W1      MA-------------------------------------------
H.sapiens_W2      MSGEPG---QTSV--------------------------------
M.musculus_W2     MSGEPA---PVSV--------------------------------

cons              *                                            


H.sapiens         PTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQIPTL
B.taurus_V        TTLLRTPALIRTLTPIRTPTPVRTPTPVPPSTPVRSPIPVRTPTP
M.musculus_V      --------------PIRTATPVRAPNPAHNSTPVRTSIRVRAPAQ
A.franciscana_w   ---------------------------------------------
D.rerio_W         ---------------------------------------------
H.sapiens_W1      ---------------------------------------------
H.sapiens_W2      ---------------------------------------------
M.musculus_W2     ---------------------------------------------

cons                                                           


H.sapiens         VPTPALARIPRLVP------PPAPAWIPTPVPTPVPVRNPTPVPT
B.taurus_V        VPPSTPVRTPTPVPLSTPVRPPTPVRPPTPVRPPTPVRPPTPIGT
M.musculus_V      VPNPVPIRFPTPAPVPAPTL--TPAPTPAPVRHAAPVRTPAPVRA
A.franciscana_w   ---------------------------------------------
D.rerio_W         ---------------------------------------------
H.sapiens_W1      ---------------------------------------------
H.sapiens_W2      ------------------------APPPEEVEP------------
M.musculus_W2     ------------------------VPPPGEVEA------------

cons                                                           


H.sapiens         PARTLTP-PVRVPAPAPAQLLAGIRAALPVLDSYLAPALPLDPPP
B.taurus_V        PTLIRSPTPVQIPIPEPIPTPIPSRVLIPPLESFPDSALPSGPPL
M.musculus_V      PNLGR------------------VFPKISPGRFFPSLASPTAQPL
A.franciscana_w   ---------------------------------------------
D.rerio_W         ---------------------------------------------
H.sapiens_W1      ---------------------------------------------
H.sapiens_W2      ---------------------------------------------
M.musculus_W2     ---------------------------------------------

cons                                                           


H.sapiens         EPAPELPLLPEEDPEPAPSLKLIPS-----VSSE---AGPAPGPL
B.taurus_V        ELEPTLTVSPAKNLEPSPAKNLEPSPRVKQVSSAANGFPPIQEPL
M.musculus_V      SSRAA----SALLKDPTLAQNQKPS-----IHSL---AEAIQGPL
A.franciscana_w   ---------------------------------------------
D.rerio_W         ---------------------------------------------
H.sapiens_W1      ---------------------------------------------
H.sapiens_W2      ---------------------------------------------
M.musculus_W2     ---------------------------------------------

cons                                                           


H.sapiens         PTRTPLAANSPGPTLD--FTFRADPSAIGLADPPIP---SPVP--
B.taurus_V        PALTPLATDLRSPSLG--SPLRTDTSTTNLIASSSGHVPG-----
M.musculus_V      PVLTPSSSKTQGSIPDTASPIDSLA-STAMASSTLGPIPGPNPTL
A.franciscana_w   ---------------------------------------------
D.rerio_W         ---------------------------------------------
H.sapiens_W1      ---------------------------------------------
H.sapiens_W2      ---------------------------------------------
M.musculus_W2     ---------------------------------------------

cons                                                           


H.sapiens         ---------SPILGTIPSAISLQ--NCTETFPSSSENFALDKRVL
B.taurus_V        ---------TPILGAIQAILPVP----ATALASISGNLKEENKIM
M.musculus_V      EFLASPLKETPGLGKLSTISPAPSFGSTKEIPSTSEDVPTPNRIL
A.franciscana_w   -------------------------------------------VK
D.rerio_W         -------------------------------------------VK
H.sapiens_W1      -------------------------------------------LA
H.sapiens_W2      ----------------------------------------GSGVR
M.musculus_W2     ----------------------------------------GSGVH

cons                                                         : 


H.sapiens         IRVTYCGLUSYSLRYILLKKSLEQQFPNHLLFEEDRAAQATGEFE
B.taurus_V        IRVVYCGLUSYSLRYILLRKSLEQQFPNSLIFEEEISAQATGEFE
M.musculus_V      IRVMYCGLUSYGLRYIILKRTLEHQFPNLLEFEEERATQVTGEFE
A.franciscana_w   IHVEYCGAXGYAPRYQELAAKIRKAAPDA---EVSGNVGRRSSFE
D.rerio_W         VHVVYCGGXGYRPKFIKLKTLLEDEFPNELEITGEGTPSTTGWLE
H.sapiens_W1      VRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDICGEGTPQATGFFE
H.sapiens_W2      IVVEYCEPCGFEATYLELASAVKEQYPGI---EIESRLGGTGAFE
M.musculus_W2     IVVEYCKPCGFEATYLELASAVKEEYPGI---EIESRLGGTGAFE

cons              : * **   .:   :  *   :..  *.      .      . :*


H.sapiens         VFVNGRLVHSKKRGDGFVNE-SRLQKIV-SVIDEEIKK-------
B.taurus_V        VFVDGKLIHSKKNGDGFVDE-VKLQTIV-NLLNEEFKKKV-----
M.musculus_V      VFVDGKLIHSKKKGDGFVDE-SGLKKLV-GAIDEEIKK-------
A.franciscana_w   VTVNGELIHSKLSTNGFPDF-DEVVEIVISVTKGDKPRTVEKTH-
D.rerio_W         VEVNGKLVHSKKNGDGFVDSDSKMQKIV-TAIEQAM-G-------
H.sapiens_W1      VMVAGKLIHSKKKGDGYVDTESKFLKLV-AAIKAALAQ-------
H.sapiens_W2      IEINGQLVFSKLENGGFPYE-KDLIEAIRRASNGETLEKITNSRP
M.musculus_W2     IEINGQLVFSKLENGGFPYE-KDLMEAIRRASNGEPVEKITNSRP

cons              : : *.*:.**   .*:      .   :    .            


H.sapiens         ----R
B.taurus_V        --AGN
M.musculus_V      ----R
A.franciscana_w   SSCII
D.rerio_W         ----K
H.sapiens_W1      ----G
H.sapiens_W2      PCVIL
M.musculus_W2     PCVIL

cons