genewise output
Score 19.21 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

D.rerio           17 EKEKLDDAKKEKLEDKDEETGLRVV-IEHCKSXRVYGRNAVVVREALAD 
                     E E+L +  +  + D+D+   LRV+  E  K  RV G ++ V  ++L   
                     ELERLAEYNRSGVGDRDDRPVLRVLGKELAKDWRVVGEDSAVTVDSLGT 
gi|298517523|gb39728 gcgccggtactggggcggccgcagcgagcgagtcgggggaggaggacga 
                     atagtcaaagcgtgagaagcttgttgaatcaaggttgaagctctagtgc 
                     atgctgactggtctcgtccggcgatcagcgacgagtcgccggcgctcac 


D.rerio           65 SHPE                                              
                        E                                              
                     DREE                                              
gi|298517523|gb39875 gcgg                                              
                     agaa                                              
                     caaa                                              


//
>gi|298517523|gb|GL349451.1|:subseq(221993,50000).pep
ELERLAEYNRSGVGDRDDRPVLRVLGKELAKDWRVVGEDSAVTVDSLGTDREE
//
>gi|298517523|gb|GL349451.1|:subseq(221993,50000).[39728:39886].sp
GAACTTGAGCGCCTTGCGGAATACAATCGGTCGGGTGTCGGTGACCGGGATGACCGCCCG
GTGCTCAGGGTACTTGGCAAAGAGCTCGCGAAAGACTGGCGAGTGGTTGGCGAGGACAGC
GCGGTGACCGTGGACAGTCTCGGAACCGACCGAGAAGAA
//
gi|298517523|gb|GL349451.1|:subseq(221993,50000)	GeneWise	match	39728	39886	19.21	+	.	gi|298517523|gb|GL349451.1|:subseq(221993,50000)-genewise-prediction-1
gi|298517523|gb|GL349451.1|:subseq(221993,50000)	GeneWise	cds	39728	39886	0.00	+	0	gi|298517523|gb|GL349451.1|:subseq(221993,50000)-genewise-prediction-1
//

genewise output
Score 51.96 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

D.rerio           49 RVYGRNAVVVREALADSHPELKVMINP-------HNPRRNSFEITLM-- 
                     R Y R A  +R+ALA + P+ +V++NP         PRR SFEI L+   
                     RTYARKANELRDALAGAFPDHEVVVNPPALVPAGSRPRRGSFEIVLIAG 
gi|298517523|g-25266 catgcagagccggcgggtcgcggggaccgcgcggaccccgttgagcagg 
                     gcacgacaatgactcgctcaaatttacccttccgggcgggctattttcg 
                     cgtgcgccgccttgccgctctgggccggggggcgccggtcgtaccccct 


D.rerio           89 --DGERADVLWSGIK-KGPPRKLKFPEPAEVVTALKQAL           
                       DG   + LWSG+  K PPRK KF +  + +  ++ AL           
                     GPDGAPDEPLWSGFAIKKPPRKAKFIDHDKAIALVQAAL           
gi|298517523|g-25119 gcgggcggccttgtgaaacccagatagcgagagcgcggc           
                     gcagccaactgcgtctaaccgacattaaaactcttacct           
                     gtccgccggcggctccggggcgcgccctcgctggggtgg           


//
>gi|298517523|gb|GL349451.1|:subseq(221993,50000).pep
RTYARKANELRDALAGAFPDHEVVVNPPALVPAGSRPRRGSFEIVLIAGGPDGAPDEPLW
SGFAIKKPPRKAKFIDHDKAIALVQAAL
//
>gi|298517523|gb|GL349451.1|:subseq(221993,50000).[25266:25001].sp
CGCACGTATGCGCGCAAGGCCAACGAGCTCCGCGATGCTCTGGCCGGCGCGTTCCCTGAC
CATGAGGTGGTGGTCAACCCGCCGGCGCTGGTGCCGGCCGGGAGCCGCCCGCGGCGTGGC
TCGTTTGAAATCGTCCTCATCGCCGGTGGGCCTGACGGCGCGCCCGACGAGCCGCTCTGG
TCGGGCTTTGCCATCAAGAAGCCGCCGCGCAAGGCCAAGTTCATCGACCATGACAAGGCC
ATTGCGCTGGTGCAGGCTGCGCTG
//
gi|298517523|gb|GL349451.1|:subseq(221993,50000)	GeneWise	match	25266	25003	60.95	-	.	gi|298517523|gb|GL349451.1|:subseq(221993,50000)-genewise-prediction-1
gi|298517523|gb|GL349451.1|:subseq(221993,50000)	GeneWise	cds	25266	25003	0.00	-	0	gi|298517523|gb|GL349451.1|:subseq(221993,50000)-genewise-prediction-1
//