T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:1 sec.
SCORE=69
*
 BAD AVG GOOD
*
H.Sapiens      :  74
M.musculus     :  75
X.laevis       :  72
B.hominis      :  68
N.gruberi      :  72
P.pallidum     :  67
P.ultimum      :  53
S.parasitica   :  55
T.trahens      :  38
cons           :  69

H.Sapiens      MKTAENIRGTGSDGPRKRGLCVLCGLPAAGKSTFARALAHRLQQ----
M.musculus     MKTAAARGATRRDGQPKLGLCVLCGLPAAGKSTFARALALRLRR----
X.laevis       M----CEEATR----RQVGICLLCGLPGAGKSTLGRSFSATILR----
B.hominis      EVI---------------------------------------------
N.gruberi      ------------------------------------------------
P.pallidum     ------------------------------------------------
P.ultimum      T--AMMMGATN-DGAPT-VLIALCGLPGAGKTTLVSRLACNTSHSAAA
S.parasitica   -------------------LLLLCGLPGAGKSTFARAIADAAS-----
T.trahens      A-----------------------------------------------

cons                                                           


H.Sapiens      -----EQGWAIGVVAYDDVMP-DAFL-A---------------GARAR
M.musculus     -----ERGWAVGVLSYDDVLP-LALP-D---------------CDGTQ
X.laevis       -----QR---FAVITYDKIITAEAFHLALQDELDQSREIPPSSALLKT
B.hominis      ------------------------------------------------
N.gruberi      ------------------------------------------------
P.pallidum     ------------------------------------------------
P.ultimum      TGDRPMRRWWCERLSFDDLLA-SYSS-S---------------TSQTD
S.parasitica   ------RTYEVRCISFDDVFA-AHFA-A----------------DGGS
T.trahens      ------------------------------------------------

cons                                                           


H.Sapiens      PAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITCL
M.musculus     PRPSQWKMFRQELLKHLECFLVAVISGAQMSAPPNRTEAVWEDFITCL
X.laevis       QETSQWKQHRQYLLEYLEHLIVALLNSSELRPPEGKCDGTWYRFVDCL
B.hominis      ------------------------------------------------
N.gruberi      ------------------------------------------------
P.pallidum     ------------------------------------------------
P.ultimum      FDPALWKHCQ--------------------------------------
S.parasitica   FAPQQW------------------------------------------
T.trahens      ------------------------------------------------

cons                                                           


H.Sapiens      KDQDLI-FSAA-FEAQSCYLLTKTAVSRP----LFLVLDDNFYYQSMR
M.musculus     KSQDLMIFPTA-LEAQPCHLLAKPAVSRP----LFLVLDDNFYYQSMR
X.laevis       EEQGLI-SSAGSSTEKGTHSVIIP-ENDE----VCLVLDDNFYYQSMR
B.hominis      ----------------------KTQVSRILRSDNYVILDTMNFIKGYR
N.gruberi      -----------------------------------IILDDNFYYKSMR
P.pallidum     -----------------------------------LLLDDNFHLRGMR
P.ultimum      ------------------------------------------------
S.parasitica   ------------------------------------------------
T.trahens      ------------------------------------------------

cons                                                           


H.Sapiens      YEVYQLARKYS-----LGFCQLFLDCPLETCLQRNGQRPQA--LPPET
M.musculus     YEVYQLARKYS-----LGFCQLFLDCPLETCLKRNGERSQP--LPDET
X.laevis       YEVYQLARKYS-----LGFCQIYLHCPVESCVLRNKGRPVS--IAEDT
B.hominis      YEMYCIARCCK-----STRCVVWVDTPISAIESFN-QSCSH--YSNEV
N.gruberi      HEFVQICQEFT-----IAHIQIILKCNVETCIERDAKRSQP--VGEDI
P.pallidum     QQVYRVCRSFVTPTVAVAFGIAWLAVPSDRALSRNAGRDPPRRVTTVT
P.ultimum      ------------------------------------------------
S.parasitica   ------------------------------------------------
T.trahens      ------------------------------------------------

cons                                                           


H.Sapiens      IHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVTDLLLTALEN
M.musculus     IQLMGRKIEKPNPEKNAWEHNSLIIQSSACSLEASLEVTGLLLTALEN
X.laevis       IRLMDKKIQKPNPEKNSWEQNSLVLDSSQLIKADDHRIVKLVNQAMAN
B.hominis      LQDLACRFEPPSPLT-RWD-----------------------------
N.gruberi      IRSMNIR-----------------------------------------
P.pallidum     WDRLAAAAEPPDPTR-S-------------------------------
P.ultimum      ------------------------------------------------
S.parasitica   ------------------------------------------------
T.trahens      ------------------------------------------------

cons                                                           


H.Sapiens      PVKYAEDNMEQKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQEA
M.musculus     PIKCVEDNTEQKETDRIICSTNILHKADETLRRTVSQTMREAKDEQIP
X.laevis       PLRPLQENLEIKEKDRAITAASILHQADQSIRRCISETMRRVKGTAS-
B.hominis      ------------------------------------------------
N.gruberi      ------------------------------------------------
P.pallidum     ------------------------------------------------
P.ultimum      ------------------------------------------------
S.parasitica   ------------------------------------------------
T.trahens      -----------------VTAANLAHQADLASRRAFTAVMRGLG----Q

cons                                                           


H.Sapiens      FSEMTFKQRWVRANHAA-IWRIILGN-EHIKCRSAKVGWLQ-------
M.musculus     LNNLKHLAEELNKLKADVLEDLRQGN-RKYLCFQQTTDLSDIISSFCK
X.laevis       AHEMKVAAQELQSAKSQFLEDLRERLCEKGIQPMTACNATTIVSLFKE
B.hominis      ------------------------------------------------
N.gruberi      ------------------------------------------------
P.pallidum     ------------------------------------------------
P.ultimum      ------------------------------------------------
S.parasitica   ------------------------------------------------
T.trahens      GDDRKAAASALHAAKAAAL-----------------------------

cons                                                           


H.Sapiens      --CCRIE------------------KRPLSTG
M.musculus     ERDTIVQ------------------KYFSKQH
X.laevis       QTDHIVQPFLATEQSCCLEPNLDCNDRASGIS
B.hominis      --------------------------TPLFRV
N.gruberi      ------------------------------FE
P.pallidum     ------------------------------WE
P.ultimum      ----------------------------REMV
S.parasitica   -------------------------------K
T.trahens      ---------------------------AAFRD

cons