T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=92
*
 BAD AVG GOOD
*
T.trahens        :  93
D.melanogaster   :  92
M.musculus       :  93
cons             :  92

T.trahens        ----------------------------------------FDPTS
D.melanogaster   ---------------------------------------MFQPEK
M.musculus       MAEAAAAGASGETMAALVAAEGSLGPAGWSAGRSFSNYRPFEPQT

cons                                                     *:* .


T.trahens        LGLPPGFRLTDYAKLKGXGCKVSQEDLHGLLESTPLPS--PPXXI
D.melanogaster   HGLEPDFQLTKFTTHTGXSCKIPQKVLEKYLRGTEIEN--K---N
M.musculus       LGFSPSWRLTSFSGMKGXGCKVPQETLLKLLEGLTRPALQPP--L

cons              *: *.::**.::  .**.**:.*: *   *..            


T.trahens        D---------------------------NEAIGLDCSIIPT-AIE
D.melanogaster   NDGY------------------------LIGSGMDCAVIPLKRHK
M.musculus       TSGLVGGQEETVQEGGLSTRPGPGSAFPSLSIGMDSCVIPL-RHG

cons                                           . *:*..:**     


T.trahens        GVVTIQTTDYFYPLVEDPYQQGRIACANVLSDLFAMGISRCDTML
D.melanogaster   DYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVE
M.musculus       GLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNML

cons             .   :**.*:***:*:**   **** ******::*:*::. *.: 


T.trahens        MILAASLEMPKDQRMIVTRELIRGFNDLATEAG---TSVTGGQTV
D.melanogaster   MIVSTSTSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLK
M.musculus       MLLSVSQSMSEKEREKVTPLMIKGFRDAAEEGG---TAVTGGQTV

cons             *:::.* .:.:.:*  *   :::**.:     *   *.:   *  


T.trahens        LNPWPIIGGVASAVVPSDGGYIDPFSLVPGDVMVLTKPIGTQVAV
D.melanogaster   INPWCIIGGIATSVCRSE-EIILPSNAQPGDVLVLTKPLGGQMAM
M.musculus       VNPWIIIGGVATVVCQQN-EFIMPDSAVVGDVLVLTKPLGTQVAA

cons             :*** ****:*: *  .:   * * .   ***:*****:* *:* 


T.trahens        NAYQWL-GDHEAGKEGSNWDLIADVLSPAQARVAFALASASMARL
D.melanogaster   DAHLWQLNQTE------KYKKLLSECSDADIKETFEIAVKSMTYL
M.musculus       NAHQWL-DNPE------KWNKIKMVVSREEVELAYQEAMFNMATL

cons             :*: *  .: *      ::. :    *  : . ::  *  .*: *


T.trahens        NKSGAALMVKHGAHGATDVTGFGLLGHARNLAEHQKAAVHISIHT
D.melanogaster   NKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINK
M.musculus       NRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQKNEVSFVIHN

cons             *:..* ** .. ** ***:****:***:.***: **  * : *:.


T.trahens        LPVIENMPAVNDKF-N-FKLLDGWSSETSGGLLVALPSADAAAAF
D.melanogaster   LPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPA-DAADKF
M.musculus       LPIIAKMAAISKASGR-FGLLQGTSAETSGGLLICLPR-EQAARF

cons             **:* ::  ..    .   : .* * *******:.**  : *  *


T.trahens        CADI-----------------------------------------
D.melanogaster   CRDFEEATNGEQ-KSFQIGHVTAANESDAVLCEDVEFIEV-----
M.musculus       CSEIKSSKYGEGHQAWIVGIVEKGNRTAR-IIDKPRVIEVLPRGA

cons             * ::                                         


T.trahens        ------------------E
D.melanogaster   -----------------SL
M.musculus       SAAAAAAPDNSNAASEPSS

cons