T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=81
*
BAD AVG GOOD
*
N.gruberi : 76
D.melanogaster : 82
M.musculus : 83
cons : 81
N.gruberi ---------------------------------------------
D.melanogaster M---------------------------------------FQPEK
M.musculus MAEAAAAGASGETMAALVAAEGSLGPAGWSAGRSFSNYRPFEPQT
cons
N.gruberi -----NVKLTSTTHGLGCGCKIRAQTLSSILSKIPKQPFDP---N
D.melanogaster HGLEPDFQLTKFTTHTGXSCKIPQKVLEKYLRGTEIENK--NNDG
M.musculus LGFSPSWRLTSFSGMKGXGCKVPQETLLKLLEGLTRPALQPPLTS
cons . :**. : * .**: :.* . * .
N.gruberi VLVGTE-----------------------TSDDCGVYK--LTSEL
D.melanogaster YLIGS-------------------------GMDCAVIPLKRHKDY
M.musculus GLVGGQEETVQEGGLSTRPGPGSAFPSLSIGMDSCVIPL-RHGGL
cons *:* . *. *
N.gruberi ALCATVDFFTPIVDSPKDFGAIACANALSDVYAMGG-ECKVALNI
D.melanogaster LLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMI
M.musculus SLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLML
cons * *.*** *:*:.* :* ** **.***:**:* : . :
N.gruberi VAFPV---KRLSLDILQLILQGAQEKASEAGV---TIIGGHSIED
D.melanogaster VSTSTSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKIN
M.musculus LSVSQSMSEKEREKVTPLMIKGFRDAAEEGGT---AVTGGQTVVN
cons :: . :: : *:::* :: . * .: : :
N.gruberi NEPKFGMCVSGLVHPERIWKNVGCRNGDVLLLTKPIGTGVLTTAM
D.melanogaster PWCIIGGIATSVCRSEEIILPSNAQPGDVLVLTKPLGGQMAMDAH
M.musculus PWIIIGGVATVVCQQNEFIMPDSAVVGDVLVLTKPLGTQVAANAH
cons :* .: : : :.: .. ****:****:* : *
N.gruberi KKG-LIGPND--------------DCSKKCIEWMSTLNKSASEIL
D.melanogaster L-WQLNQTEKYKKLLSECSDADIKETFEIAVKSMTYLNKNAALLM
M.musculus Q-W-LDNPEKWNKIKMVVSREEVELAYQEAMFNMATLNRTAAGLM
cons * .:. : .: *: **:.*: ::
N.gruberi RGLHRVNSSSTPYEIHACTDITGFGLMGH----------------
D.melanogaster H----------KYQAHCATDITGFGLLGHANNLAQFQKEKVLFQI
M.musculus H----------TFNAHAATDITGFGILGHSQNLAKQQKNEVSFVI
cons : :: *..*******::**
N.gruberi ---------------------------------------------
D.melanogaster NKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADK
M.musculus HNLPIIAKMAAISKASGRFG-LLQGTSAETSGGLLICLPREQAAR
cons
N.gruberi ---------------------------------------------
D.melanogaster FCRDFEEATNGEQ-KSFQIGHVTAANESDAVLCEDVEFIEV----
M.musculus FCSEIKSSKYGEGHQAWIVGIVEKGNRTAR-IIDKPRVIEVLPRG
cons
N.gruberi --------------------
D.melanogaster ------------------SL
M.musculus ASAAAAAAPDNSNAASEPSS
cons