T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=85
*
BAD AVG GOOD
*
S.parasitica : 96
A.aegypti : 82
D.rerio : 84
H.sapiens : 89
M.musculus : 89
S.mansoni : 78
cons : 85
S.parasitica ------TLWMGDVQINWDEAYVSSLFDAFGHL-PTVKLIRDKVTGYPA
A.aegypti MSSIQCQLWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPA
D.rerio MFNRMTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSA
H.sapiens M---AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPA
M.musculus M---AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPA
S.mansoni MQNFSHTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTL
cons :***.:: * :: * *. **:: .: ** .
S.parasitica GYGFLEFDSPEAASEVLSTLNGQPIPNT-P-HRFRLNWGAGGKR--LE
A.aegypti GYCFVSFKTDEAAIDAMHKLNGKPIPGTNPLVRFRLNSATNNQNKALL
D.rerio GYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYGKR--PE
H.sapiens GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQ--PD
M.musculus GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQ--PD
S.mansoni GYGFIEFANSTSARDAMLKLNGKLIPGA-PTRRFKLNHASYGKD--ST
cons ** *:.: :. : :**: :*.: * :*:** .: .:
S.parasitica SMEDHSVFVGDLAGDVTDDVLFSTFSAKYASVRGAKVVLDQMSRISKG
A.aegypti ADREFSVWVGDLSSDVDDYSLYRVFSAKYTSIKTAKVILDSS-GFSKG
D.rerio PGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTDPY-GNSRG
H.sapiens NSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT-GVSKG
M.musculus NSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPT-GVSKG
S.mansoni SSNECSLFVGELTEDVDDLALFNAF-KKYPTCRSAKVVMT-N-GKSRG
cons : *::**:*: :* * *. * :.: : .**: *:*
S.parasitica FGFVRF------------------------------------------
A.aegypti YGFVKFGLEDEQKSALYEMNGFIGLGCKPLKICNAVPKPKNELGPAGP
D.rerio YGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKGNKAS-TY--
H.sapiens YGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVK-PV--
M.musculus YGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRVK-PV--
S.mansoni YGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSLAIPKRYNADGSLVV
cons :***:*
S.parasitica ------------------------------------------------
A.aegypti TSST--PS---------------AASLLGYGTATDYS-QYYDPSTYWQ
D.rerio -------H---------------NQN-NT--YNTNYQQQYYQQ-PY-N
H.sapiens -----------------------EYS-QM--YSYSYN-QYYQQ--Y-Q
M.musculus -----------------------EYS-QM--YSYSYN-QYYQQ--Y-Q
S.mansoni TTTASETSSVVPSGMPDPFTAAVAAAVTG--NSAAQA-EYYQA--Y-Q
cons
S.parasitica ------------------------------------------------
A.aegypti NYSAWQGYYDATGTADYSAYQM--PA-A--------------------
D.rerio SYYPQWGYDQYSG-YNYGYNPY--AA-----PPPMMGPPPPM---GMP
H.sapiens NYYAQWGYDQNTGSYSYSYPQY--GY-----TQ---------------
M.musculus NYYAQWGYDQNTGSYSYSYPQY--GY-----TQ---------------
S.mansoni QYYQQYYASQYAA-QFYSSESSTNGDSANSGITSIAGGGTLVGDATVQ
cons
S.parasitica ------------------------------------------------
A.aegypti --AAVDASAYHAYEQQQQHHHAHSQVEDEELTLVDHKYTLDVEKLNR-
D.rerio PMP-P---D---MQGSTEAHDGTEEVEEDP--SEDPNPQVDVEELNR-
H.sapiens -----------------STMQTYEEVGDDA--LEDPMPQLDVTEANK-
M.musculus -----------------STMQTYEEVGDDA--LEDPAPQLDVTEANK-
S.mansoni QHAFVDAAASHLYARALQQGTGS------Q--EYAPEPHVLSSACDRP
cons
S.parasitica -----------------------------------
A.aegypti EVMERDRNLYDALESSKWMPVEQ-LE-----I--F
D.rerio QYMERSEELYDSLMECHWLPMDT-ITSDISMMNGS
H.sapiens EFMEQSEELYDALMDCHWQPLDT-VSSEIPAM--M
M.musculus EFMEQSEELYDALMDCHWQPLDT-VSSEIPAM--M
S.mansoni RHVDDLDEVFNFLESSRWHVTDPSLGLFIKIR--P
cons