T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=97
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BAD AVG GOOD
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T.trahens : 98
M.musculus : 97
X.tropicalis : 97
cons : 97
T.trahens ------ATGQRRLSPRYVRQGGVSLGGRARAVRSLLSQRQLPRQGWNE
M.musculus MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDGWDE
X.tropicalis MEHESFKASERLVTPAYIRQGREARRMHEQLVRQLVEQGKCPKEPWDE
cons :.:* ::* *:*** : : : :* *:.* : *.: *:*
T.trahens ASISAFLDELATMDSNNFADRAGVGEREARVFSPLVARRHFGLGHGVG
M.musculus STLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIG
X.tropicalis STIEIFLNELAVMDSNNFLGNCGVGEREGRVASGMVSRRHYRLIHGIG
cons :::. **.***.****** ...******.** * :*:***: : **:*
T.trahens RSGELAAVQPKAAGSSLMYKLANALVLHALRLAGMRVAKKAIIVPTAT
M.musculus RSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMAT
X.tropicalis RSGDISAIQPKAAGSSVLNKLTNSMVLDIIRLAGVRTASSCFVVPMAT
cons ***:::*:********:: *::*::**. ::***:: . ..::** **
T.trahens GMALVLCLLALCESRHARRYVIWPRIDQKTAFKAILTAGLTPLVVEPR
M.musculus GMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV
X.tropicalis GMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENV
cons **:*.**:*:* ..* :*:********:.**:::***: *:*:*
T.trahens KCPRGSDALVTDVDGVRAAIESVGADNVLCILSTTSCFAPRTPDKVVA
M.musculus ---LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEE
X.tropicalis ---LEGDELRTDLDAVEAKITELGAENILCVHSTTSCFAPRVPDRVEE
cons .* * **:..*.* * .:*.:::**: ***:*****.**::
T.trahens LAELASEYGIGHVVNNAYGVQSRRCMGLLNEAARVGRLDAFVQSTDKN
M.musculus LAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKN
X.tropicalis LAVICKKYEIPHVVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKN
cons ** :. :* * ********:** :** *:::.*****:****** ***
T.trahens FMVPVGGAVVASANKAFVDAVSLLYPGRASAAPIVDLFITLLAMGEEG
M.musculus FMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSG
X.tropicalis FMVPVGGAVIAGFSDSFVQEISKMYPGRASASPSLDVLITLLSLGASG
cons ********::*. ...*:: :* :*******:* :*::****::* .*
T.trahens WTELLASRADVFGYAQAELAQVAERTGLRLLDVRGNDISMALSLDALS
M.musculus YRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID
X.tropicalis YNKLLKERKEMFVYLSSELKKLAKELNERLLETPHNPISLALSLTSLS
cons : :** .* ::* * .::* ::*: . ***:. * **:*::* ::.
T.trahens SECGGDDDAVTMLGSMLFVRSVSGARVVVPSKTKTIGPVTFAHYGSHS
M.musculus GH---HDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHA
X.tropicalis EQ---SGSAVTQLGSMLFTRQVSGARVVPLGTSQTINGYVFKGFMSHS
cons . ..*** ******.*.*****.* .. :*:. .* : **:
T.trahens SASSEPYVNVAAAIGMTSTDIDRFVVRFEKTLAAWRKAHASP------
M.musculus DNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQTRASVVSGA
X.tropicalis NNYPCAYLNAASAICIKKQDVDMFIKRLDKCLRLCKKEKHLAKDEPRC
cons . . .*:*.*:** :. *:* *: *::* * :* : .
T.trahens --------------------------------S
M.musculus DRNKAEDADIEEMALKLDDVLG-DVG--QGPAL
X.tropicalis AQQTTED-DVAELAQGLGDVLQGETASELLLSG
cons