T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=84
*
 BAD AVG GOOD
*
P.pallidum       :  92
D.melanogaster   :  77
H.sapiens        :  85
M.musculus       :  86
cons             :  84

P.pallidum       ---------------------------------------------
D.melanogaster   M--------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       MASERPREPDGEDSIKLSADVKPFVPKFAGLNVAWSESSETRVFP

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       GCAATYYPFVQEPPAAEQKMYPEDMAFGAPTFPAQYVSSEIALHP

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       FAYPTYTLESAQSVCSVPTLQYDYSQARCHPGFRTAKPRHEHVCP

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       PPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGSS

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       HLSSRTESSLKSDGYHKRPDRKSRILAKSASTSKPEFEFSRLDFP

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       ELQSPKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEG

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       KMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSA

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ------------------------------------YNKEKHIIH
M.musculus       AATENVTSMINLKKTTSSADAKNVSVTSEALSSNPSYNREKR-VY

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   -TEKIRRSRNQDVQDTAIKITPRSSKYKNQHRKREQQTSLLD-FV
H.sapiens        PTQKSKASQGSDLEQN-------EASRKNK-KKKEKSTSKYEVLT
M.musculus       PAPKAKASQGGELEQN-------ESSKKNK-KKKEKSKPSYEVLT

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   IKPRP----------------------------------------
H.sapiens        VQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNV
M.musculus       VQEPPRIEDAEEFPNLSVASERRHRGQSPKLHSKQQTQNEFKTSG

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        KKSQLPVQLDLGGMLTALEKK---QHSQHAKQSSKPVVVSVGAVP
M.musculus       KKSQVPVQLDLGGMLAALEKQQQQQHASHAKPSSRPVVFSVGAVP

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   -------KTQRQTKAHKLQKTHLAITRGSYIVYKPKGKTRLDPK-
H.sapiens        VLSKECASGERGRRMSQMKTPHNPLDSSA--PLMKKGKQREIPKA
M.musculus       VLSKDASSSERGRRSSQMKTPHNPLDSSA--PLMKKGKQREIPKA

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   KKITRLKKSVRVYRTSKKAER--------EVAENDLEGVPVVGQD
H.sapiens        KKPTSLKKIILKERQERKQ-RLQENAVSPAFTSDDTQDGESGGDD
M.musculus       KKPTSLKKIILKERQERMQQRLQESAVSLTVASDDSQDVESGASN

cons                                                          


P.pallidum       ---------------------------------------------
D.melanogaster   INPNAI------------------------PLEQQVQNLSLSKTP
H.sapiens        QFPEQAELSGPEGMDE-LISTPSVEDKSEEPPGTELQRDTEASHL
M.musculus       QTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQP

cons                                                          


P.pallidum       -------------------QEYMNQVCTKEIDDTAREFIVKIKQF
D.melanogaster   APNNPSQAKTVHAIHSRRFRSYCDNCTRPRLKELSTQLLRDLDRF
H.sapiens        APN----HTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRF
M.musculus       APD----SATFPKIHSRRFRDYCSQMLSKEVDACVTGLLKELVRF

cons                                :.* .:    .:.     :: .: :*


P.pallidum       QDNYALKNPDK--PKKRFITGLREIERAADCGKLSAVIIAPNIED
D.melanogaster   QKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDCEI
H.sapiens        QDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEK
M.musculus       QDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCIIISPNCEK

cons             *..   *:  *  .: *:: *:**        *:. ::::.: * 


P.pallidum       INCPGGLNESIKSIIRLCRSKQLLYTFALSRRIIGRLINVHIKVS
D.melanogaster   CPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQIC
H.sapiens        IQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVPVS
M.musculus       TQSKGGLDDTLHTIIDCACEQNIPFVFALNRKALGRSLNKAVPVS

cons                 .**: ::. :   . .::: : *.* *: :.  ::    :.


P.pallidum       AFGILFHDGAEDIYNRLSKLTLASRDTFRKQQQQVQ---------
D.melanogaster   CVAILDFDGANATYADLLNEIEDARAEYKRRTA------------
H.sapiens        VVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRP
M.musculus       IVGIFSYDGAQDQFHKMVELTMAARQAYKTMLETMRQEQAGEPGP

cons              ..*: .***:  :  : :    :*  ::                


P.pallidum       ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        QAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCT
M.musculus       QSPPSPPMQDPIPSTEEGTL-PSTGEEPHYIEIWKKHLEAYSQRA

cons                                                          


P.pallidum       ------------------Q
D.melanogaster   ------------------S
H.sapiens        LELEESLEASTSQMMNLNL
M.musculus       LELEDSLEASTSQMMNLNL

cons