T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=85
*
 BAD AVG GOOD
*
C.muris          :  93
D.melanogaster   :  78
H.sapiens        :  86
M.musculus       :  86
cons             :  85

C.muris          ---------------------------------------------
D.melanogaster   M--------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       MASERPREPDGEDSIKLSADVKPFVPKFAGLNVAWSESSETRVFP

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       GCAATYYPFVQEPPAAEQKMYPEDMAFGAPTFPAQYVSSEIALHP

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       FAYPTYTLESAQSVCSVPTLQYDYSQARCHPGFRTAKPRHEHVCP

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       PPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGSS

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       HLSSRTESSLKSDGYHKRPDRKSRILAKSASTSKPEFEFSRLDFP

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       ELQSPKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEG

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ---------------------------------------------
M.musculus       KMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSA

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        ------------------------------------YNKEKHIIH
M.musculus       AATENVTSMINLKKTTSSADAKNVSVTSEALSSNPSYNREKR-VY

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   -TEKIRRSRNQDVQDTAIKITPRSSKYKNQHRKREQQTSLLD-FV
H.sapiens        PTQKSKASQGSDLEQN-------EASRKNK-KKKEKSTSKYEVLT
M.musculus       PAPKAKASQGGELEQN-------ESSKKNK-KKKEKSKPSYEVLT

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   IKPRP----------------------------------------
H.sapiens        VQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNV
M.musculus       VQEPPRIEDAEEFPNLSVASERRHRGQSPKLHSKQQTQNEFKTSG

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        KKSQLPVQLDLGGMLTALEKK---QHSQHAKQSSKPVVVSVGAVP
M.musculus       KKSQVPVQLDLGGMLAALEKQQQQQHASHAKPSSRPVVFSVGAVP

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   -------KTQRQTKAHKLQKTHLAITRGSYIVYKPKGKTRLDPK-
H.sapiens        VLSKECASGERGRRMSQMKTPHNPLDSSA--PLMKKGKQREIPKA
M.musculus       VLSKDASSSERGRRSSQMKTPHNPLDSSA--PLMKKGKQREIPKA

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   KKITRLKKSVRVYRTSKKAER--------EVAENDLEGVPVVGQD
H.sapiens        KKPTSLKKIILKERQERKQ-RLQENAVSPAFTSDDTQDGESGGDD
M.musculus       KKPTSLKKIILKERQERMQQRLQESAVSLTVASDDSQDVESGASN

cons                                                          


C.muris          ---------------------------------------------
D.melanogaster   INPNAI------------------------PLEQQVQNLSLSKTP
H.sapiens        QFPEQAELSGPEGMDE-LISTPSVEDKSEEPPGTELQRDTEASHL
M.musculus       QTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQP

cons                                                          


C.muris          -------------------QNYVTQILTASLDRAVSTLLNTLRAI
D.melanogaster   APNNPSQAKTVHAIHSRRFRSYCDNCTRPRLKELSTQLLRDLDRF
H.sapiens        APN----HTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRF
M.musculus       APD----SATFPKIHSRRFRDYCSQMLSKEVDACVTGLLKELVRF

cons                                :.*  :     :.   : **. *  :


C.muris          DDRVRWMSSGVSSKGRVFTVGVREAMRCLRHKKLQALIVAPDIEG
D.melanogaster   QKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDCEI
H.sapiens        QDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEK
M.musculus       QDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCIIISPNCEK

cons             :.*    .   :     :.:*:**.:  *: .*:: ::::.: * 


C.muris          GDIEGGLRHHVIHILMQAQEFNIPVIFALNRHRIGRAMGKHMRMS
D.melanogaster   CPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQIC
H.sapiens        IQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVPVS
M.musculus       TQSKGGLDDTLHTIIDCACEQNIPFVFALNRKALGRSLNKAVPVS

cons                :.**   :  :   . : ::*  *.* *: :. :: *   :.


C.muris          VLGLLSTRGVERQFQTVAHTAKVLQRLYNFCIE------------
D.melanogaster   CVAILDFDGANATYADLLNEIEDARAEYKRRTA------------
H.sapiens        VVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRP
M.musculus       IVGIFSYDGAQDQFHKMVELTMAARQAYKTMLETMRQEQAGEPGP

cons              :.::.  *.:  :  : .     :  *:                


C.muris          ---------------------------------------------
D.melanogaster   ---------------------------------------------
H.sapiens        QAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCT
M.musculus       QSPPSPPMQDPIPSTEEGTL-PSTGEEPHYIEIWKKHLEAYSQRA

cons                                                          


C.muris          ------------------H
D.melanogaster   ------------------S
H.sapiens        LELEESLEASTSQMMNLNL
M.musculus       LELEDSLEASTSQMMNLNL

cons