T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=81
*
 BAD AVG GOOD
*
pstk-P.pallidum   :  86
pstk-M.jannasch   :  76
pstk_human        :  82
pstk_mus          :  83
pstk_xenopus      :  81
cons              :  81

pstk-P.pallidum   ---------------------------------------------
pstk-M.jannasch   M------------------LIILTGLPGVGKSTFSKNLAKILSKN
pstk_human        MKTAENIRGTGSDGPRKRGLCVLCGLPAAGKSTFARALAHRLQQE
pstk_mus          MKTAAARGATRRDGQPKLGLCVLCGLPAAGKSTFARALALRLRRE
pstk_xenopus      MCEEATR--------RQVGICLLCGLPGAGKSTLGRSFSATILRQ

cons                                                           


pstk-P.pallidum   ---------------------------------------------
pstk-M.jannasch   NI---DVIVLGSDLIR-ESF-------------------------
pstk_human        QGWAIGVVAYD-DVMP-DAFLA-----GARA-----------RPA
pstk_mus          RGWAVGVLSYD-DVLP-LALPD-----CDGT-----------QPR
pstk_xenopus      RF---AVITYD-KIITAEAFHLALQDELDQSREIPPSSALLKTQE

cons                                                           


pstk-P.pallidum   ---------------------------------------------
pstk-M.jannasch   -PVWKEKYEEFIKK-------------------------------
pstk_human        PSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITC
pstk_mus          PSQWKMFRQELLKHLECFLVAVISGAQMSAPPNRTEAVWEDFITC
pstk_xenopus      TSQWKQHRQYLLEYLEHLIVALLNSSELRPPEGKCDGTWYRFVDC

cons                                                           


pstk-P.pallidum   --------------------------------LLLDDNFHLRGMR
pstk-M.jannasch   -----------------STYRLIDSA-LKNYWVIVDDTNYYNSMR
pstk_human        LKDQDLI-FSA-AFEAQSCYLLTKTAVSRPLFLVLDDNFYYQSMR
pstk_mus          LKSQDLMIFPT-ALEAQPCHLLAKPAVSRPLFLVLDDNFYYQSMR
pstk_xenopus      LEEQGLI-SSAGSSTEKGTHSVIIPE-NDEVCLVLDDNFYYQSMR

cons                                              :::**. : ..**


pstk-P.pallidum   QQVYRVCRSFVTPTVAVAFGIAWLAVPSDRALSRNAGRDPPRRVT
pstk-M.jannasch   RDLINIAKKY-----NKNYAIIYLKASLDVLIRRNIERGEK--IP
pstk_human        YEVYQLARKY-----SLGFCQLFLDCPLETCLQRNGQRPQA--LP
pstk_mus          YEVYQLARKY-----SLGFCQLFLDCPLETCLKRNGERSQP--LP
pstk_xenopus      YEVYQLARKY-----SLGFCQIYLHCPVESCVLRNKGRPVS--IA

cons               :: .:.:.:        :   :*  . :  : **  *     :.


pstk-P.pallidum   TVTWDRLAAAAEPPDPT-RSW------------------------
pstk-M.jannasch   NEVIKKMYEKFDEPGK-KYKWDEPFLIIDTTKDID-FNEIAKKLI
pstk_human        PETIHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVTDLL
pstk_mus          DETIQLMGRKIEKPNPEKNAWEHNSLIIQSSACSLEASLEVTGLL
pstk_xenopus      EDTIRLMDKKIQKPNPEKNSWEQNSLVLDSSQLIKADDHRIVKLV

cons                .   :    : *.     *                        


pstk-P.pallidum   ---------------------------------------------
pstk-M.jannasch   EKSKEIPKFYVLEENKNK-------NNNISDKIDKETRKIVSEYI
pstk_human        LTALENPVKYAEDNMEQKDTDRIICSTNILHKTDQTLRRIVSQTM
pstk_mus          LTALENPIKCVEDNTEQKETDRIICSTNILHKADETLRRTVSQTM
pstk_xenopus      NQAMANPLRPLQENLEIKEKDRAITAASILHQADQSIRRCISETM

cons                                                           


pstk-P.pallidum   ---------------------------------------------
pstk-M.jannasch   KSKKLDKDKIKEVVELRKEF---------------L-KKIKKMEE
pstk_human        KEAKGNQEAFSEMTFKQRWVRANHAA-IWRIILGN-EHIKCRSAK
pstk_mus          REAKDEQIPLNNLKHLAEELNKLKADVLEDLRQGN-RKYLCFQQT
pstk_xenopus      RRVKGTASA-HEMKVAAQELQSAKSQFLEDLRERLCEKGIQPMTA

cons                                                           


pstk-P.pallidum   -------------------------------------------E
pstk-M.jannasch   VDADRVLKEFK---------------------------DLLNSY
pstk_human        VGWLQCC---------RIEK------------------RPLSTG
pstk_mus          TDLSDIISSFCKERDTIVQK------------------YFSKQH
pstk_xenopus      CNATTIVSLFKEQTDHIVQPFLATEQSCCLEPNLDCNDRASGIS

cons