T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=76
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BAD AVG GOOD
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P.tricornutum : 72
A.gambiae : 75
A.anophageffere : 74
C.reinhardtii : 73
D.rerio : 76
H.sapiens : 79
M.musculus : 80
C.intestinalis : 75
cons : 76
P.tricornutum PAESP------AAPATPAAE-DT----------GDEK--KT----
A.gambiae MAPRR----KRAAAAKSTETAAKK--------AKPEE--SAST-P
A.anophageffere MAPKR------KASAKQDSEPKK---------AAKTK--AD----
C.reinhardtii MAPKR------KAAAAAEAPAKKAKAPA--KKKEAEK--KEETAP
D.rerio MATRGKSARKRKADSDEKE--------------KLDDAKKEKLED
H.sapiens MAPRG---RKRKAEAAVVAVAEK----------------REKLAN
M.musculus MAPHG---RKRKAGAAPMETVDK----------------REKL--
C.intestinalis MARKA---RKRKSAAAEAEIAGEISVSENVKPEKVDQVNDEPYAK
cons * : :
P.tricornutum -GTDDQKKTVAIEACKQXGAFKTRANTIVKAVGDK---AK--ISI
A.gambiae VEESQDGAYVFIEHCKSUSVFKRKAAEVHSGLCELAPEHKFQLVL
A.anophageffere -APPSEGGVVVVEACKSUGAFKTRANKVLKALEGK---AE--VKI
C.reinhardtii -VAADAGDGIVIEACKSUGAFKTRATKLEKLIKEGAPGTS--VSV
D.rerio -KDEETGLRVVIEHCKSURVYGRNAVVVREALADSHPELK--VMI
H.sapiens GGEGMEEATVVIEHCTSURVYGRNAAALSQALRLEAPELP--VKV
M.musculus ----AEGATVVIEHCTSURVYGRHAAALSQALQLEAPELP--VQV
C.intestinalis -TKKEDMVQLKIEHCKSURVYGRNAQLVLDALQTVEPNLS--SSI
cons : :* *.. .: .* : . : :
P.tricornutum NA-EKPGKGNFVVRVSGQ-DAPLVEL-LGLKR-PFPPLKALDMEE
A.gambiae NEDGKPRRGAFEVSIAKGKDGEKVLVWSGLPKGPPRKDKFPEPKT
A.anophageffere NE-EKPRKGAFVVSVG---DTKVVEL-LDMKR-PFPALKALDMDD
C.reinhardtii NP-DKPRKGCFEVRGPGG--KTFVSL-LDMPR-PFTKLKALDVEA
D.rerio NP-HNPRRNSFEITLMDG--ERADVLWSGIKKGPPRKLKFPEPAE
H.sapiens NP-TKPRRGSFEVTLLRP-DGSSAELWTGIKKGPPRKLKFPEPQE
M.musculus NP-SKPRRGSFEVTLLRS-DNSRVELWTGIKKGPPRKLKFPEPQE
C.intestinalis NP-TKPRSKSFEVSIVKD--GIETVIWSGVKKGPPRKLKFPSKEE
cons * :* * : : .: : * * .
P.tricornutum VCEKVLQ--AI-EA
A.gambiae ILDDVLK--VL-KN
A.anophageffere VAADVEK--AL-AA
C.reinhardtii LAEEVLA--AL-KE
D.rerio VVTALKQ--ALEKE
H.sapiens VVEELKK--Y--LS
M.musculus VVEELKK--Y--LS
C.intestinalis IIECFQNAECV-KK
cons : .