T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=94
*
 BAD AVG GOOD
*
translate.SecS.   :  75
SecS_M.musculus   :  95
SecS_X.tropical   :  95
SecS_D.rerio      :  96
cons              :  94

translate.SecS.   ---------------------------------------------
SecS_M.musculus   MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
SecS_X.tropical   MEHESFKASERLVTPAYIRQGREARRMHEQLVRQLVEQGKCPKEP
SecS_D.rerio      MNSENFRLSEKLVSASYVRQGLDARRGHEQLIRRLLDQGKCPEEG

cons                                                           


translate.SecS.   --ESADPFFIHWLCFLDSQKATGDGGVPERSRP------------
SecS_M.musculus   WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
SecS_X.tropical   WDESTIEIFLNELAVMDSNNFLGNCGVGEREGRVASGMVSRRHYR
SecS_D.rerio      WSESTIELFLNELAVMDSNNFLGNCGVGEREGRVASSLVARRHYR

cons                **:  :*:: *..:**::  *: ** **.              


translate.SecS.   ---GVGSTGGG----------------------------------
SecS_M.musculus   FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA
SecS_X.tropical   LIHGIGRSGDISAIQPKAAGSSVLNKLTNSMVLDIIRLAGVRTAS
SecS_D.rerio      LIHGIGRSGDIAAVQPKAAGSSLLNKITNSVVLDVLKLTGVRSVS

cons                 *:* :*.                                   


translate.SecS.   ---------------------------------------------
SecS_M.musculus   SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV
SecS_X.tropical   SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
SecS_D.rerio      SCFVVPMATGMSLTLCFLTLRHRRPKARYILWPRIDQKSCFKSMV

cons                                                           


translate.SecS.   ---------------------------------------------
SecS_M.musculus   TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTA
SecS_X.tropical   TAGFEPVVIENVLEGDELRTDLDAVEAKITELGAENILCVHSTTS
SecS_D.rerio      TAGFEPVVIENVLEGDELRTNLEEVERKIEEFGAENTLCVHSTTS

cons                                                           


translate.SecS.   ---------------------------------------------
SecS_M.musculus   CFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA
SecS_X.tropical   CFAPRVPDRVEELAVICKKYEIPHVVNNAYGVQSSKCMHLIQQGA
SecS_D.rerio      CFAPRVPDRLEELSVLCAKHDIPHIVNNAYGVQPSKCMHLIQQGA

cons                                                           


translate.SecS.   ------------------------------------------RVS
SecS_M.musculus   RVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRAS
SecS_X.tropical   RVGRIDAFVQSLDKNFMVPVGGAVIAGFSDSFVQEISKMYPGRAS
SecS_D.rerio      RVGRIDAFVQSLDKNFVVPVGGAIIAGFDENFIQEISKIYPGRAS

cons                                                        *.*


translate.SecS.   ---------------------------------------------
SecS_M.musculus   ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHN
SecS_X.tropical   ASPSLDVLITLLSLGASGYNKLLKERKEMFVYLSSELKKLAKELN
SecS_D.rerio      ASPSLDVLITLLTLGANGYKKLLADRKELYGHLAQELSALAARHG

cons                                                           


translate.SecS.   ---------------------------------------------
SecS_M.musculus   ERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARA
SecS_X.tropical   ERLLETPHNPISLALSLTSLSEQSGSAVTQLGSMLFTRQVSGARV
SecS_D.rerio      ERLLKTPHNPISLAMSLNHLEAHSSSAVTQLGSMLFTRQVSGARV

cons                                                           


translate.SecS.   ---------------------------------------------
SecS_M.musculus   VPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLF
SecS_X.tropical   VPLGTSQTINGYVFKGFMSHSNNYPCAYLNAASAICIKKQDVDMF
SecS_D.rerio      VPLGVQQTVSGHTFSGFMSHSEAYPCPYLNAASAIGITKGDVTVC

cons                                                           


translate.SecS.   ------------------------------------LP-------
SecS_M.musculus   IKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLDDVL
SecS_X.tropical   IKRLDKCLRLCKKEKHLAKDEPRCAQQTTED-DVAELAQGLGDVL
SecS_D.rerio      MKRLGKCLKILKKEKSDPADL------EAEDGELEESPQR-----

cons                                                   .       


translate.SecS.   ----ASRVRYGV
SecS_M.musculus   -GDV--GQGPAL
SecS_X.tropical   QGETASELLLSG
SecS_D.rerio      ------STELRV

cons