INDEX.pl

for genome 
in A.taiwanensis B.hominis C.merolae C.muris C.owczarzaki C.parvum E.siliculosus H.arabidopsidis N.gruberi P.pallidum P.tricornutum P.ultimum S.parasitica T.trahens ; 
do { 
	blastdb=`grep $genome /cursos/BI/genomes/protists/genomes_list_and_info.tab | cut -f 4`;
	mkdir -p "Resultats/index";

fastaindex $blastdb ~/novell/home/Bioinfo/Treball/Resultats/index/$genome.index
} done