TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Drosophila melanogaster # Complete
         (511 letters)

Database: B.hominis/genome.fa 
           54 sequences; 18,817,245 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|FN668672.1| Blastocystis hominis, Singapore isolate B (sub-t...   112   5e-42
emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-t...    90   3e-18
emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-t...    90   3e-18
emb|FN668683.1| Blastocystis hominis, Singapore isolate B (sub-t...    90   3e-18
emb|FN668690.1| Blastocystis hominis, Singapore isolate B (sub-t...    90   3e-18
emb|FN668641.1| Blastocystis hominis, Singapore isolate B (sub-t...    66   3e-11
emb|FN668661.1| Blastocystis hominis, Singapore isolate B (sub-t...    63   4e-10
emb|FN668655.1| Blastocystis hominis, Singapore isolate B (sub-t...    44   2e-04

>emb|FN668672.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_4
          Length = 1031885

 Score =  112 bits (279), Expect(2) = 5e-42
 Identities = 50/91 (54%), Positives = 70/91 (76%)
 Frame = -3

Query: 67     LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126
              +Q+T VDCPGHASLIRTI+GGAQIID++++V+D  KG Q QTAEC++IGE+   K I+ +
Sbjct: 741621 IQYTLVDCPGHASLIRTILGGAQIIDMLIIVIDCLKGIQAQTAECIVIGEITTNKAIIAL 741442

Query: 127    NKIDVYPENQRASKLEKLRLRLAKTLEATTF 157
              NKID+ PE +R+ +++ +   L KTL  T F
Sbjct: 741441 NKIDLIPEAERSDRIKTVISSLQKTLSKTRF 741349



 Score = 89.0 bits (219), Expect(2) = 3e-21
 Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
 Frame = -2

Query: 195    PLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASM 254
              PL+   DHCF + G+G V TGT+L G V VN+ IE P+L   RKVKSIQMF K +     
Sbjct: 741115 PLYFIYDHCFQLAGKGCVMTGTVLSGSVSVNDEIEFPSLHLTRKVKSIQMFHKGIDKVLK 740936

Query: 255    GDRIGLCV----------TQFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYK 298
              GDR G+CV            F+ K  ERG     G LK +  + ++ K IR+YK
Sbjct: 740935 GDRAGICVQ*FLIIKVTSRSFDFK-SERGEACAVGSLKAMQNILIRLKKIRFYK 740777



 Score = 77.8 bits (190), Expect(2) = 5e-42
 Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 10/68 (14%)
 Frame = -1

Query: 4      NFNIGLLGHVDSGKTTLAK----------ALSSISSTAAFDKNPQSVERGITLDLGFSGL 53
              N N+G++GHVDSGKT+L K          +LS+I STA+ DKNPQS +RGITLDLGFS  
Sbjct: 741875 NINVGVMGHVDSGKTSLGKKFTNI*ILVKSLSAILSTASLDKNPQSRQRGITLDLGFSAF 741696

Query: 54     LVDAPAHL 61
              L D P+H+
Sbjct: 741695 LSDIPSHI 741672



 Score = 59.7 bits (143), Expect(2) = 3e-12
 Identities = 38/104 (36%), Positives = 59/104 (56%)
 Frame = -1

Query: 336    DKEYEYMEDVQPAEVQHNDVIYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGR 395
              D  + +   + P+   H   ++ALLQ E  + +P  + LI S+L+  V  T CR+AF+ +
Sbjct: 740372 DSPHHHRSSLFPS-FSHIATLWALLQLEQTIYAPLGALLIGSQLNSQVDGT-CRIAFYAK 740199

Query: 396    IAWQTHSSKYFQEELPKLRIFKRKQKVGSIQRVVNSSEVIVQNL 439
              +  Q  S K  +E+L  LR+FK KQ+   + R+VN  EVI  NL
Sbjct: 740198 VI-QALSPK--KEDLSVLRVFKPKQRTAIVDRIVNEREVIGTNL 740076



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
 Frame = +2

Query: 6      NIGLLGHVDSGKTTLAKALSS----ISSTAA-----FDKNPQSVER-------GITLDLG 49
              N+ ++ HVD GK+TL  AL S    IS  AA      D      ER       GI+L   
Sbjct: 325010 NLSVVAHVDHGKSTLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYFE 325189

Query: 50     FSGLLVDAPAHL--PQGEQLQ------------FTFVDCPGHASLIRTIIGGAQIIDLML 95
              +    +D  A +  P+GE ++               +D PGH      +    ++ D  L
Sbjct: 325190 YDPETIDKAASVATPEGEAVEEENVEIKHNSYLINLIDSPGHVDFSSEVTAALRVTDGAL 325369

Query: 96     LVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130
              +VVD+  G   QT   L      + + +++ NK+D
Sbjct: 325370 VVVDSVGGVCVQTETVLRQALTERIRPVLMCNKLD 325474



 Score = 31.2 bits (69), Expect(2) = 3e-21
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 27/70 (38%)
 Frame = -3

Query: 301    IKSMRKMHISVGHNTVMANVTLFRDT---------------------------DGTTSTF 333
              +KS     +S+GH+TV A +TLF D                            D   ++F
Sbjct: 740742 VKSGSTFSVSIGHHTVSATITLFSDMEKEGLMNGAVNRMIEKLKEGSFGVNLFDEEVNSF 740563

Query: 334    QLDKEYEYME 343
                D+ YEY E
Sbjct: 740562 DFDRSYEYTE 740533



 Score = 29.6 bits (65), Expect(2) = 3e-12
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 448    YVGKNVELSTGEKGRIERTFGQTSKVAITFQD 479
              +VG +V   +G KGRI+  FG++ K  + F +
Sbjct: 740016 FVGLDVVTKSGLKGRIDAPFGKSGKFKVVFSE 739921


>emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_1
          Length = 1866585

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 78/317 (24%), Positives = 132/317 (41%), Gaps = 47/317 (14%)
 Frame = +3

Query: 4      NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39
              + N+ ++GHVDSGK+T    L                         S       DK    
Sbjct: 245571 HINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVLDKMKAE 245750

Query: 40     VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV- 98
               ERGIT+D+              Q E+  FT +D PGH   I+ +I G    D+ +L++ 
Sbjct: 245751 RERGITIDISLWKF---------QTEKYFFTIIDAPGHRDFIKNMITGTSQADVAILIIA 245903

Query: 99     ------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151
                    +A  GK  QT E  L+   L  K++I  +NK+D    N   ++ ++++  +   
Sbjct: 245904 AGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKMDDKSVNYSEARYKEIKAEMTSF 246083

Query: 152    LEATTFGG---QVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196
              L    +     ++P   +S   G ++ E            L E L   +  P+R +  PL
Sbjct: 246084 LTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKGPTLIEALDNIH-PPKRPVDKPL 246260

Query: 197    FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
               + +   + I G GTV  G +  G ++    +    +G   +VKS++M  +++  A  GD
Sbjct: 246261 RLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVGVTTEVKSVEMHHESIPQALPGD 246440

Query: 257    RIGLCVTQFNAKLLERG 273
               +G  V   + K + RG
Sbjct: 246441 NVGFNVKNVSVKDIHRG 246491



 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 78/317 (24%), Positives = 132/317 (41%), Gaps = 47/317 (14%)
 Frame = +1

Query: 4      NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39
              + N+ ++GHVDSGK+T    L                         S       DK    
Sbjct: 668974 HINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVLDKMKAE 669153

Query: 40     VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV- 98
               ERGIT+D+              Q E+  FT +D PGH   I+ +I G    D+ +L++ 
Sbjct: 669154 RERGITIDISLWKF---------QTEKYFFTIIDAPGHRDFIKNMITGTSQADVAILIIA 669306

Query: 99     ------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151
                    +A  GK  QT E  L+   L  K++I  +NK+D    N   ++ ++++  +   
Sbjct: 669307 AGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKMDDKSVNYSEARYKEIKAEMTSF 669486

Query: 152    LEATTFGG---QVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196
              L    +     ++P   +S   G ++ E            L E L   +  P+R +  PL
Sbjct: 669487 LTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKGPTLIEALDNIH-PPKRPVDKPL 669663

Query: 197    FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
               + +   + I G GTV  G +  G ++    +    +G   +VKS++M  +++  A  GD
Sbjct: 669664 RLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVGVTTEVKSVEMHHESIPQALPGD 669843

Query: 257    RIGLCVTQFNAKLLERG 273
               +G  V   + K + RG
Sbjct: 669844 NVGFNVKNVSVKDIHRG 669894



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
 Frame = +3

Query: 6       NIGLLGHVDSGKTTLAKALSSI---------SSTAAFDKNPQSVERGITLDLGFSGLLVD 56
               NIG +GHVD GKTTL  A++ +         S+    DK P+   RGIT++         
Sbjct: 1540638 NIGTIGHVDHGKTTLTAAITKVLAEKNLAEFSAYDQIDKAPEERARGITIN--------- 1540790

Query: 57      APAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIG 115
                  H+  + E   +  VDCPGHA  ++ +I GA  +D  +LVV A  G   QT E +++ 
Sbjct: 1540791 -STHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAVDGPMPQTREHILLA 1540967

Query: 116     -ELLQKKLIVVINKIDVYPENQRASKLE 142
                ++    + V +NKID+  + +    +E
Sbjct: 1540968 HQVGVPNIAVFMNKIDLVDDPELVELVE 1541051



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
 Frame = +1

Query: 188     PQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGE--QRKVKSIQMF 245
               P R L     M ++  + I+G+GTV TG + QG+V+V + +E+  L       V  ++MF
Sbjct: 1541269 PTRQLDKDFLMAIEDVYSIQGRGTVVTGRVEQGRVKVGDAVEICGLKPTLSTVVTGVEMF 1541448

Query: 246     RKNVTSASMGDRIGLCVTQFNAKLLERG-IITQPGYLK 282
                K++     GD +GL +     + + RG ++ +P  +K
Sbjct: 1541449 HKSMNEGQAGDNVGLLLRGVKREEVLRGQLVAKPKSVK 1541562


>emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_2
          Length = 1458350

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 78/317 (24%), Positives = 132/317 (41%), Gaps = 47/317 (14%)
 Frame = -3

Query: 4      NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39
              + N+ ++GHVDSGK+T    L                         S       DK    
Sbjct: 991620 HINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVLDKMKAE 991441

Query: 40     VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV- 98
               ERGIT+D+              Q E+  FT +D PGH   I+ +I G    D+ +L++ 
Sbjct: 991440 RERGITIDISLWKF---------QTEKYFFTIIDAPGHRDFIKNMITGTSQADVAILIIA 991288

Query: 99     ------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151
                    +A  GK  QT E  L+   L  K++I  +NK+D    N   ++ ++++  +   
Sbjct: 991287 AGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKMDDKSVNYSEARYKEIKAEMTSF 991108

Query: 152    LEATTFGG---QVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196
              L    +     ++P   +S   G ++ E            L E L   +  P+R +  PL
Sbjct: 991107 LTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKGPTLIEALDNIH-PPKRPVDKPL 990931

Query: 197    FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
               + +   + I G GTV  G +  G ++    +    +G   +VKS++M  +++  A  GD
Sbjct: 990930 RLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVGVTTEVKSVEMHHESIPQALPGD 990751

Query: 257    RIGLCVTQFNAKLLERG 273
               +G  V   + K + RG
Sbjct: 990750 NVGFNVKNVSVKDIHRG 990700



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
 Frame = +2

Query: 18      TTLAKALSSISSTAAF--DKNPQSV-----------ERGITLDLGFSGLLVDAPAHLPQG 64
               T  AK L   S   AF  D+NP+ V             G+T+ LG   L         Q 
Sbjct: 1423739 TKEAKELGKQSFNYAFLMDQNPEEVGSPVFESEA*RTHGVTIHLGAISL---------QT 1423891

Query: 65      EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGK---------QTQTAECLIIG 115
               E+   T +D PGH   +  +I G    D  +LV+ AQKG+          T+    +++G
Sbjct: 1423892 EERCVTLLDAPGHRDFVAAMIAGGLRADAGILVISAQKGEFEAGWSTAGITKEHLLIMVG 1424071

Query: 116     ELLQKKLIVVINKID 130
                 ++  L +++NK+D
Sbjct: 1424072 SGIE-TLAILVNKMD 1424113


>emb|FN668683.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_5
          Length = 953317

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 78/317 (24%), Positives = 132/317 (41%), Gaps = 47/317 (14%)
 Frame = -1

Query: 4      NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39
              + N+ ++GHVDSGK+T    L                         S       DK    
Sbjct: 579589 HINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVLDKMKAE 579410

Query: 40     VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV- 98
               ERGIT+D+              Q E+  FT +D PGH   I+ +I G    D+ +L++ 
Sbjct: 579409 RERGITIDISLWKF---------QTEKYFFTIIDAPGHRDFIKNMITGTSQADVAILIIA 579257

Query: 99     ------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151
                    +A  GK  QT E  L+   L  K++I  +NK+D    N   ++ ++++  +   
Sbjct: 579256 AGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKMDDKSVNYSEARYKEIKAEMTSF 579077

Query: 152    LEATTFGG---QVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196
              L    +     ++P   +S   G ++ E            L E L   +  P+R +  PL
Sbjct: 579076 LTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKGPTLIEALDNIH-PPKRPVDKPL 578900

Query: 197    FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
               + +   + I G GTV  G +  G ++    +    +G   +VKS++M  +++  A  GD
Sbjct: 578899 RLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVGVTTEVKSVEMHHESIPQALPGD 578720

Query: 257    RIGLCVTQFNAKLLERG 273
               +G  V   + K + RG
Sbjct: 578719 NVGFNVKNVSVKDIHRG 578669



 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
 Frame = +1

Query: 70     TFVDCPGHASLIRTIIGGAQIID-LMLLVVDAQKGKQTQTAECLIIGELLQ-KKLIVVIN 127
              +FVDCPGH  L+ T++ GA ++D  +LL+   +   Q QT+E L   E+++ + LI++ N
Sbjct: 798934 SFVDCPGHDVLMATMLSGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMKLQNLIILQN 799113

Query: 128    KI----------DVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAEL 177
              KI          D+    Q   + + +R  ++ T+       + PI  +SA    +I  +
Sbjct: 799114 KIGRFLAVC*MVDLIKREQALVQFDSIRKFVSGTV-----AEKAPIIPISAQLKYNIDVV 799278

Query: 178    REVLREAYFQPQRNLADPLFMYVDHCFGIK--GQ------GTVCTGTLLQGKVQVNNVIE 229
               E +      P R+ A    M V   F +   GQ      G V  G++L+G +Q+ + IE
Sbjct: 799279 CEYIVNTIPLPVRDYASAPQMIVIRSFDVNKPGQRAEELKGGVAGGSILKGVLQLGDEIE 799458

Query: 230    -LPAL 233
               LP L
Sbjct: 799459 ILPGL 799473


>emb|FN668690.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_8
          Length = 854764

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 78/317 (24%), Positives = 132/317 (41%), Gaps = 47/317 (14%)
 Frame = +2

Query: 4      NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39
              + N+ ++GHVDSGK+T    L                         S       DK    
Sbjct: 251903 HINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVLDKMKAE 252082

Query: 40     VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV- 98
               ERGIT+D+              Q E+  FT +D PGH   I+ +I G    D+ +L++ 
Sbjct: 252083 RERGITIDISLWKF---------QTEKYFFTIIDAPGHRDFIKNMITGTSQADVAILIIA 252235

Query: 99     ------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151
                    +A  GK  QT E  L+   L  K++I  +NK+D    N   ++ ++++  +   
Sbjct: 252236 AGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKMDDKSVNYSEARYKEIKAEMTSF 252415

Query: 152    LEATTFGG---QVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196
              L    +     ++P   +S   G ++ E            L E L   +  P+R +  PL
Sbjct: 252416 LTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKGPTLIEALDNIH-PPKRPVDKPL 252592

Query: 197    FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
               + +   + I G GTV  G +  G ++    +    +G   +VKS++M  +++  A  GD
Sbjct: 252593 RLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVGVTTEVKSVEMHHESIPQALPGD 252772

Query: 257    RIGLCVTQFNAKLLERG 273
               +G  V   + K + RG
Sbjct: 252773 NVGFNVKNVSVKDIHRG 252823



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
 Frame = +2

Query: 6      NIGLLGHVDSGKTTLAKALSSI---------SSTAAFDKNPQSVERGITLDLGFSGLLVD 56
              NIG +GHVD GKTTL  A++ +         S+    DK P+   RGIT++         
Sbjct: 528455 NIGTIGHVDHGKTTLTAAITKVLAEKNLAEFSAYDQIDKAPEERARGITIN--------- 528607

Query: 57     APAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIG 115
                 H+  + E   +  VDCPGHA  ++ +I GA  +D  +LVV A  G   QT E +++ 
Sbjct: 528608 -STHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAVDGPMPQTREHILLA 528784

Query: 116    -ELLQKKLIVVINKIDVYPENQRASKLE 142
               ++    + V +NKID+  + +    +E
Sbjct: 528785 HQVGVPNIAVFMNKIDLVDDPELVELVE 528868



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
 Frame = +3

Query: 188    PQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGE--QRKVKSIQMF 245
              P R L     M ++  + I+G+GTV TG + QG+V+V + +E+  L       V  ++MF
Sbjct: 529086 PTRQLDKDFLMAIEDVYSIQGRGTVVTGRVEQGRVKVGDAVEICGLKPTLSTVVTGVEMF 529265

Query: 246    RKNVTSASMGDRIGLCVTQFNAKLLERG-IITQPGYLK 282
               K++     GD +GL +     + + RG ++ +P  +K
Sbjct: 529266 HKSMNEGQAGDNVGLLLRGVKREEVLRGQLVAKPKSVK 529379


>emb|FN668641.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_11
          Length = 591523

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 52/177 (29%), Positives = 81/177 (45%)
 Frame = +1

Query: 7      IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66
              I ++GHVD GKTTL   L   SS AA +        GIT  +    + + +   +     
Sbjct: 359758 IAVMGHVDHGKTTLLDRLRQ-SSVAAHEAG------GITQAISAFNVKLSSDNVI----- 359901

Query: 67     LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126
                 TF+D PGHA+       GA   D++LL+V    G + QT ECL +    +  ++V +
Sbjct: 359902 ---TFIDTPGHAAFTAMRKRGATATDIVLLIVAGDDGVKEQTVECLKLIHDTKLPVVVAV 360072

Query: 127    NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLRE 183
               K      ++  +        L   L  T FGG+V I  + ++ G  I +L+ +L E
Sbjct: 360073 TKCGKKNVDKDKAVHRVATQLLDYDLITTPFGGEVNIIGIDSITGDGIEDLKNLLYE 360243


>emb|FN668661.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_3
          Length = 1354787

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 83/357 (23%), Positives = 156/357 (43%), Gaps = 42/357 (11%)
 Frame = +2

Query: 52     GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG-------K 104
              G+ V+      + E  +FT +D PGH + +  +I GA   D  +LV+ A+KG       +
Sbjct: 391211 GITVEVGRAYFETEHKRFTVLDAPGHKNYVPNMIAGAAQADAGVLVISARKGEFESGFER 391390

Query: 105    QTQTAECLIIGELL-QKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQ--V 161
                QT E +++ + L  K+LIV +NK+D         +   +  +L+  L+   +  Q  V
Sbjct: 391391 SGQTREHVLLAKTLGVKRLIVAVNKMDEETVKWSERRYNDIVTKLSPYLKRVGYNVQEDV 391570

Query: 162    PICAVSALQGTHIAE-LREVLREAYFQPQ------------RNLADPLFMYVDHCFGIKG 208
                  VS L+G ++ E + E +   Y  P             R+ + PL + V   F    
Sbjct: 391571 TFLPVSGLRGYNLKEGIPEGMCPWYSGPSLFQILDSMQIEGRDASAPLRLPVLDKF--ND 391744

Query: 209    QGTVCTGTLLQGKVQ----------VNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258
              +G V TG +  G++           V N + L     + +V+SI +  K V SA  G+ +
Sbjct: 391745 RGCVITGKVESGRLVGVDPRGDA*IVGNSVLLMPNSRKAEVQSITINDKEVLSAKPGENV 391924

Query: 259    GLCVTQFNAKLLERGIITQPGYLK---------PIYAVCLQFKPIRYYKEVIKSMRKMHI 309
               + +   +   + RG   + G ++          I+AV  +F+      E++++ R M  
Sbjct: 391925 NVRLKGISDSNVFRG*ARRGGAMRRDIICHEDLHIHAV-KEFEARLVLLELLENRRIM-- 392095

Query: 310    SVGHNTVMANVTLFRDTDGTTSTFQLDKEYEYMEDVQPAEVQHNDVIYALLQFESPV 366
              + G+  V+   T   +   T    + D++ + ++   P  V+ + +++A L    PV
Sbjct: 392096 TAGYGAVLHIHTAVEEVMITDLIAEQDRKTKAIKK-HPRFVKSDSIVFAKLSLSKPV 392263



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
 Frame = +1

Query: 9       LLGHVDSGKTTLAKALSSISSTAAFDKNPQSV-------ERGITLDLGFSGLLVDAPAHL 61
               ++ H+D GK+TLA A+   +     +   Q +       ERGIT+    + +LV +P   
Sbjct: 1115812 IIAHIDHGKSTLADAIMKRAGNIPENAQAQFLDNLEVERERGITVKAQTASMLVRSP--- 1115982

Query: 62      PQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQT 108
                 GE      +D PGH      +         +L++VDA +G Q QT
Sbjct: 1115983 KDGENYLLNLIDTPGHVDFSYEVEKSLVACQGVLMLVDATQGIQAQT 1116123


>emb|FN668655.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
             shotgun sequence assembly, scaffold_24
          Length = 222987

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
 Frame = -1

Query: 6     NIGLLGHVDSGKTTLAKALSS----ISSTAA-----FDKNPQSVER-------GITLDLG 49
             N+ ++ HVD GK+TL  AL S    IS  AA      D      ER       GI+L   
Sbjct: 29988 NLSVVAHVDHGKSTLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYFE 29809

Query: 50    FSGLLVDAPAHL--PQGEQLQ------------FTFVDCPGHASLIRTIIGGAQIIDLML 95
             +    +D  A +  P+GE ++               +D PGH      +    ++ D  L
Sbjct: 29808 YDPETIDKAASVATPEGEAVEEENVEIKHNSYLINLIDSPGHVDFSSEVTAALRVTDGAL 29629

Query: 96    LVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130
             +VVD+  G   QT   L      + + +++ NK+D
Sbjct: 29628 VVVDSVGGVCVQTETVLRQALTERIRPVLMCNKLD 29524


  Database: B.hominis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 18,817,245
  Number of sequences in database:  54
  
Lambda     K      H
   0.320    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,102,922
Number of Sequences: 54
Number of extensions: 129850
Number of successful extensions: 618
Number of sequences better than 1.0e-03: 8
Number of HSP's better than  0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 253
length of query: 511
length of database: 6,272,415
effective HSP length: 101
effective length of query: 410
effective length of database: 6,266,961
effective search space: 2569454010
effective search space used: 2569454010
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 96 (41.6 bits)
