TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Drosophila melanogaster # Complete
         (511 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01004964.1| Ascogregarina taiwanensis CLECOP2A-A03.b1.017...    76   8e-15
gb|ABJQ01001113.1| Ascogregarina taiwanensis Contig1278, whole g...    44   3e-05
gb|ABJQ01000770.1| Ascogregarina taiwanensis Contig903, whole ge...    41   4e-04
gb|ABJQ01005303.1| Ascogregarina taiwanensis CLXbaP72-E06.g1.ab1...    40   8e-04

>gb|ABJQ01004964.1| Ascogregarina taiwanensis CLECOP2A-A03.b1.017.ab1, whole genome
           shotgun sequence
          Length = 843

 Score = 76.3 bits (186), Expect = 8e-15
 Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 20/271 (7%)
 Frame = +1

Query: 25  SSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTI 84
           SS       DK     ERGIT+D+              +  +  +T +D PGH   I+ +
Sbjct: 49  SSFKYAWVLDKLKAERERGITIDIALWQF---------ETPKFHYTVIDAPGHRDFIKNM 201

Query: 85  IGGAQIIDLMLLVVDAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQ 136
           I G    D+ LLVV A  G       K  Q  E  L+   L  K++IV +NKID      
Sbjct: 202 ITGTSQADVALLVVPADAGGFEGAFSKDGQLREHALLAFTLGVKQMIVGVNKIDATTPPY 381

Query: 137 RASKLEKLRLRLAKTLEATTFG-GQVPICAVSALQGTHIAELRE--------VLREAYFQ 187
              +  ++   ++  L+   +   +VP  A+S   G ++ E  +         L EA   
Sbjct: 382 SEGRFNEIVENVSGYLKRIGYNTAKVPFVAISGFVGDNMIEKSDKMPWYKGKTLVEALDM 561

Query: 188 ---PQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQM 244
              P+R    PL + +   + I G GTV  G +  G ++   V+    +G   + KS++M
Sbjct: 562 MEAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVLTFAPVGLTTECKSVEM 741

Query: 245 FRKNVTSASMGDRIGLCVTQFNAKLLERGII 275
             + +  A  GD +G  V   + K  +RG +
Sbjct: 742 HHEQLPEAVPGDNVGFNVKNVSVKGHQRGYV 834


>gb|ABJQ01001113.1| Ascogregarina taiwanensis Contig1278, whole genome shotgun sequence
          Length = 1293

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +2

Query: 52  GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111
           G+ ++A     + E   +  VDCPGHA  ++ ++ G   +D  +LVV AQ G   QT E 
Sbjct: 893 GITINASHIEYESETRHYGHVDCPGHAEYVKNMVTGTSQMDGGILVVSAQHGPMPQTIEH 1072

Query: 112 LIIGE 116
           +++ +
Sbjct: 1073VLLAK 1087


>gb|ABJQ01000770.1| Ascogregarina taiwanensis Contig903, whole genome shotgun sequence
          Length = 847

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = -3

Query: 72  VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKK---LIVVINK 128
           +D PGH S       G+ + D+ +LVVD   G + QT E L   ELL+ +    ++ +NK
Sbjct: 242 IDTPGHESFNNLRARGSSLCDIAILVVDIMHGLEPQTKESL---ELLRNRKCPFVIALNK 72

Query: 129 ID 130
           ID
Sbjct: 71  ID 66


>gb|ABJQ01005303.1| Ascogregarina taiwanensis CLXbaP72-E06.g1.ab1, whole genome shotgun
           sequence
          Length = 778

 Score = 39.7 bits (91), Expect = 8e-04
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
 Frame = -2

Query: 70  TFVDCPGHASLIRTIIGG--AQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVIN 127
           TF+D  GH   ++T I G  A   D  ++V  A  G Q  T E L I   L+    VVI 
Sbjct: 540 TFLDLCGHEKYLKTTIFGLVACFPDYAMIVAGANVGIQRMTREHLGIALALRVPYFVVIT 361

Query: 128 KIDVYP---ENQRASKLEKL 144
           K+D+ P     Q  ++L+KL
Sbjct: 360 KVDIAPLAVYKQTLAQLQKL 301


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.320    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,080,955
Number of Sequences: 5379
Number of extensions: 42218
Number of successful extensions: 217
Number of sequences better than 1.0e-03: 4
Number of HSP's better than  0.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of query: 511
length of database: 2,049,803
effective HSP length: 91
effective length of query: 420
effective length of database: 1,560,314
effective search space: 655331880
effective search space used: 655331880
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 90 (39.3 bits)
