CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE:  ], CPU=0.16 sec, SCORE=90, Nseq=2, Len=404 

SelI_mus_musculus                      MAGYEYVSPEQLSGFDKYKYSALDTNPLSLYIMHPFWNTIVKKKKQVFPTWLAPNLITFS
supercontig_1.12_subseq_831828_50000_  -------------------------------------------------AWLVHTVVCFK
                                                                                        :**. .:: *.

SelI_mus_musculus                      GFMLLVFNFLLLTYFDPDFYASAPGHKHVPDWVWIVVGILNFAAYTLDGVDGKQARRTNS
supercontig_1.12_subseq_831828_50000_  GALLILFTLCCSIGFIPIYSHCRAMYEPAPTWMYVWAAFCLFAYQTLDNMDGVQARRTGT
                                       * :*::*.:     * * :  . . :: .* *::: ..:  **  ***.:** *****.:

SelI_mus_musculus                      STPLGELFDHGLDSWSCVYFVVTVYSIFGRGPTGVSVFVLYLLLWVVLFSFILSHWEKYN
supercontig_1.12_subseq_831828_50000_  SSPFGQLLDHGCDALNATIATATFAVVLQLGHMNAI-----RLICCTYAVFFMTTWDEYY
                                       *:*:*:*:*** *: ...  ..*.  ::  *  ..       *:  .   *::: *::* 

SelI_mus_musculus                      TGVLFLP--WGYDISQVTISFVYIVTAVVGVEAWYEPFLFNFLYRDLFTAMIIGCALCVT
supercontig_1.12_subseq_831828_50000_  TGEMHLAVVNGADEGITVVWMLYLATAVIGPEMW--------------------------
                                       ** :.*.   * * . ..: ::*:.***:* * *                          

SelI_mus_musculus                      LPMSLLNFFRSYKSNTLKHKSVYEAMVPFFSPCLLFTLCTVWILWSPSDILEIHPRIFYF
supercontig_1.12_subseq_831828_50000_  ------------------------------------------------------------
                                                                                                   

SelI_mus_musculus                      MVGTAFANITCQLIVCQMSSTRCPTLNWLLLPLLLVVAAVIVGAATSRLESALLYTLTAA
supercontig_1.12_subseq_831828_50000_  ------------------------------------------------------------
                                                                                                   

SelI_mus_musculus                      FTLAHIHYGVQVVKQLSRHFQIYPFSLRKPNSDXLGMEEQNIGL
supercontig_1.12_subseq_831828_50000_  --------------------------------------------