T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=71
*
 BAD AVG GOOD
*
SelT            :  75
C.muris         :  64
S.parasitica    :  69
T.trahenS       :  73
C.parvum        :  69
E.silicolosus   :  73
P.tricornutum   :  72
cons            :  71

SelT            MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQI
C.muris         T---------------------------------------MIIQY
S.parasitica    ----------------------------------------VRIEF
T.trahenS       ----------------------------------------VFVAF
C.parvum        ----------------------------------------MTIQY
E.silicolosus   VE--------------FGGTASLGAVTGAGAVGSGGDVPQVLVQF
P.tricornutum   S---------------------------PRIKNMEDAAQHVKILF

cons                                                    : .  


SelT            CVSUGYRRVFEEYMRVISQRYPDI----RIEGENYLPQPIYRHIA
C.muris         CDTCSTKSLYQQLQSYLSSRVTDPD--FQFIPMKYNMSPLNKFLS
S.parasitica    CSSUGYANNYREVQKYLEANYPHLI--GRISGGNALPPPWKQQLA
T.trahenS       CQSUGYANHFRALRQALASAAPGV----EVIGTNYPVGTLRAALG
C.parvum        CDTCGTRNLYQQVQSYLSSRVTDPD--FQLIAVKYKPSPLYQGLS
E.silicolosus   CVSUGMRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALA
P.tricornutum   CNGUGMKRNFLNVQKFLEDQFPELR--GHITGANYPPPATIELAA

cons            *   .    :      :    .       .        .     .


SelT            SFLSVFKLV-LIGLII-VGKDPFAFFGMQAPS---IWQWGQENKV
C.muris         YGITTCQVGLGLSAFL--P---------------DGQPAGG-PRT
S.parasitica    SVIGYLQMA-GFAFLL-AGEHILGALSLPADL-P-LFVQMRENKF
T.trahenS       QMIMF-SVP-LFALVVVYANEICAWLDVPVPD---ALLYLASSKL
C.parvum        YAITASQVGLGLSAFL-FPSL-------FTPTDQQGQPQGG-PRT
E.silicolosus   TLGSYAQVG-GVASVL-FGSLIFDRLGVPAPF---FVPVMRRNPM
P.tricornutum   NLMSVIQLM-GIFWIVAGGEKIFRFLGYPQNQLPSVYHTINQNAM

cons                  .:   .  .:                             


SelT            YACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG-----H
C.muris         HLFMLIFFGGNILRGLFTNSNAFEVYLGTELVYSALN--------
S.parasitica    AAFAGLMILGS-MSQSMLATGAFEV--------------------
T.trahenS       MHIVVYYFVANMLVSQLTTTGAFELYVDGKLVFSKLTLG-----H
C.parvum        HLMMLIFFGGNILRGLFTNSNAFEIYLGKDLVYSAIQNNSSGYAT
E.silicolosus   -ATIVGLTVANSFCGSLLATGAFEVSIDGELVFSR----------
P.tricornutum   PIGIFLFLILPQWIGRYTQTGAFEVYLNDKEIFSKLSKG-----A

cons                               :.***:                    


SelT            LPSMQQLVQILDNEMKLNVHMDSIPHHRS
C.muris         ----------------------------N
S.parasitica    ----------------------------Y
T.trahenS       APAIDQAVDL------------------V
C.parvum        PPTLEQVVTIL-----------------N
E.silicolosus   ----------------------------L
P.tricornutum   FPTADDLISS------------------L

cons