genewise output
Score 358.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000038_1.0   19 GKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSS 
                     GKT+L +ALST ASTAAFDK PQS+ERGIT DLGFS F    P       
                     GKTSLCKALSTHASTAAFDKSPQSKERGITQDLGFSAFYSDSP------ 
gi|284093529|g-25944 gaaattagctacgtaggtgaacctagagaacgtgttgtttgtc       
                     gacgtgactccaccccctaagcacaaggtcaatgtcctacacc       
                     aaatatatgatctaaacttattaaaaatttatgtctatcttca       


SPP00000038_1.0   68 LPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLV 
                     L E+              +Q TLVDCPGHASLIRTIIGGAQIID M+LV 
                     LSEYDR------------IQYTLVDCPGHASLIRTIIGGAQIIDFMVLV 
gi|284093529|g-25815 ttgtga            actacggtcgcgataaaaagggcaagtagtg 
                     tcaaag            taacttagcgacgttgcttggcattattttt 
                     atattg            tatttatttctctataatttatatttcgagt 


SPP00000038_1.0  117 IDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDK    
                     ID  KG+QTQ+AEC+VIG+I+C  L+V LNK+D++P  +R+  +DK    
                     IDAVKGVQTQTAECIVIGEISCNNLIVALNKVDMIPADQREDRVDK    
gi|284093529|g-25704 agggaggcacaggtagaggattaataggcaaggaacggcaggcgga    
                     tactagtacaccagtttgatcgaatttctaatattccaagaagtaa    
                     tttgataataatactttaatatttattcctgctgtaataagctttg    


SPP00000038_1.0  163                        MTKKMQKTL-ENTKFRGAPIIPVAAK 
                                            + K + K +   TKF+  PI+ V A  
                                            IKKSLIKNVFSQTKFKNPPIVSVCAD 
gi|284093529|g-25566 GTCAGTA  Intron 1   CAGaaaacaaagttcaataaccagtgtgg 
                     <0-----[25566:25522]-0>taagttaattcacataaccttctgca 
                                            tgatctgtctcatatactattttttt 


SPP00000038_1.0  188 PGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKG 
                     P   E+      QG+  LI      + I  +D + PFL  VDHCF+IKG 
                     PR-EESESITKEQGLKNLIAEFQKHVKISEKDENEPFLYMVDHCFTIKG 
gi|284093529|g-25443 ca ggagaaaagcgcaacaggtcacgaatgaggagctctaggcttaaag 
                     cg aagagtcaaagtaattcataaatatcaaaaaacttattaagtctag 
                     aa aatataagaaatatcttacaataataagtatgacatgtccttacaa 


SPP00000038_1.0  237 QGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDR 
                     +GT++TGT+L GS+S+G +++IP++   KKVKS+QMF  P+  A++GDR 
                     KGTIITGTVLQGSVSIGKTIQIPSIGEEKKVKSIQMFKTPVDKAIKGDR 
gi|284093529|g-25299 agaaaagagtcgagaagaaacactagggaagatacataacggagaaggc 
                     agcttcgcttaggtgtgactatcctgaaaatactattacctaactagag 
                     gatttaattgactttttaatattttggaggcaccagtaatatgataata 


SPP00000038_1.0  286 LGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAK 
                     +GI VT++D K LERG  C    +  V   L +  +I +F+  ++  AK 
                     IGIAVTKLDSKKLERGFACDKGYIEIVDTILANASRIRFFKKEIKNSAK 
gi|284093529|g-25152 agaggaatgaaacgagtgtgagtagaggaacgagtaaattaagaaatga 
                     tgtctcatagaataggtcgaagatattacttcaccgtgttaaataacca 
                     tttataagtcagggattatcacttattcataatttacatcggacactaa 


SPP00000038_1.0  335 FH                          TVGHETVMGRLMFFSPAPDNF 
                     +H                          ++GHETVMG + +++ A     
                     YH          I:I[ata]        SIGHETVMGNVSLIARAKKEG 
gi|284093529|g-25005 tcAGTATGTA  Intron 2   TAGTAtagcgagagagtcagagaagg 
                     aa <1-----[24998:24959]-1>  ctgaacttgatcttcgcaaag 
                     tc                          ttgtattgattctccacgaac 


SPP00000038_1.0  359 DQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCP 
                         I D+     EY + E+          T+    +K            
                     LSSNIFDT---TVEYSLLEE---------LTETTYQEKDV--------- 
gi|284093529|g-24893 ctaaatga   aggttttgg         tagaatcgagg          
                     tcgattac   ctaacttaa         tcaccaaaaat          
                     tatcacta   gagctagga         gcaattaaatt          


SPP00000038_1.0  408 RQQWALVEFEKPVTCPRLCLVIGSRLDADI                    
                           +EFEKPV C      I S+LD DI                    
                     ---FVKIEFEKPVCCYPNSNYIASKLDTDI                    
gi|284093529|g-24809    tgaagtgacgtttcatatagtacgaga                    
                        ttatataactggacacaatccatacat                    
                        ttatataaagtctactttttcagtatc                    


SPP00000038_1.0  438                           TNTCRLAFHGILLHGLEDRNYA- 
                                                N CRLAF+G ++      N +  
                               H:N[aat]        ANMCRLAFNGKVIKMWNKSNVSK 
gi|284093529|g-24728 AGTAAGTT  Intron 3   TAGATgaatatgtagagaaataatagta 
                      <1-----[24727:24691]-1>  catggtctagattatgaacatca 
                                               gtgtagacttatcgggcacttca 


SPP00000038_1.0  461 DSFLPRLKVYKLKHKHGLVERAMDDYSVIGRSLFKKET-NIQLFVGLKV 
                       ++  L V+K K K  +V+R +D  ++IG++L+  +T  +Q F+G K+ 
                     EQLVNSLPVFKYKEKKAVVDRVVDANTIIGKNLLTSKTQSLQFFIGKKI 
gi|284093529|g-24619 gccgatccgtatagaaggggaggggaaaagaaccataactccttagaaa 
                     aattactcttaaaaaacttagttacacttgaattccacactatttgaat 
                     agtcctttttacgagatattatttccattaattctcataagatctaggt 


SPP00000038_1.0  509 HLSTGE----LGIIDSAFGQSGKFKI                        
                      +   +     GIIDS FGQSGKFK+                        
                     DILIDDQPRFSGIIDSPFGQSGKFKV                        
gi|284093529|g-24472 gacaggccattgaagtctgcagatag                        
                     atttaaacgtcgttacctgaggatat                        
                     ttcttcaaatatattaatcgtcacgt                        


//
Making a I in phase 1 intron
Making a N in phase 1 intron
>gi|284093529|gb|GG738855.1|:subseq(40921,51007).pep
GKTSLCKALSTHASTAAFDKSPQSKERGITQDLGFSAFYSDSPLSEYDRIQYTLVDCPGH
ASLIRTIIGGAQIIDFMVLVIDAVKGVQTQTAECIVIGEISCNNLIVALNKVDMIPADQR
EDRVDKIKKSLIKNVFSQTKFKNPPIVSVCADPREESESITKEQGLKNLIAEFQKHVKIS
EKDENEPFLYMVDHCFTIKGKGTIITGTVLQGSVSIGKTIQIPSIGEEKKVKSIQMFKTP
VDKAIKGDRIGIAVTKLDSKKLERGFACDKGYIEIVDTILANASRIRFFKKEIKNSAKYH
ISIGHETVMGNVSLIARAKKEGLSSNIFDTTVEYSLLEELTETTYQEKDVFVKIEFEKPV
CCYPNSNYIASKLDTDINANMCRLAFNGKVIKMWNKSNVSKEQLVNSLPVFKYKEKKAVV
DRVVDANTIIGKNLLTSKTQSLQFFIGKKIDILIDDQPRFSGIIDSPFGQSGKFKV
//
>gi|284093529|gb|GG738855.1|:subseq(40921,51007).[25944:24393].sp
GGAAAAACAAGTTTATGTAAAGCTCTGTCAACTCACGCTTCAACAGCAGCCTTTGATAAA
AGTCCTCAATCAAAAGAAAGAGGTATTACTCAAGATTTGGGTTTCTCTGCATTTTACTCT
GATTCCCCATTATCTGAATATGATAGGATTCAATATACTCTTGTAGATTGTCCTGGCCAT
GCCAGTTTAATTAGAACAATTATTGGTGGAGCTCAAATTATTGATTTCATGGTATTGGTT
ATTGATGCTGTGAAAGGTGTACAAACTCAAACAGCTGAATGCATTGTTATTGGAGAAATT
TCATGTAATAATTTAATTGTTGCCCTCAATAAGGTCGATATGATTCCAGCAGATCAAAGA
GAGGACCGTGTTGATAAGATTAAGAAAAGTCTCATTAAGAATGTCTTTTCCCAAACTAAA
TTTAAAAACCCTCCAATTGTTTCTGTTTGTGCTGATCCAAGAGAAGAAAGTGAAAGTATA
ACAAAGGAACAAGGACTTAAAAATCTCATTGCTGAATTCCAAAAACATGTAAAAATTTCA
GAAAAGGATGAAAATGAGCCATTCCTATATATGGTTGACCACTGTTTTACAATCAAAGGA
AAGGGAACTATTATTACAGGAACTGTTTTGCAAGGCAGTGTTAGTATTGGTAAAACAATT
CAAATTCCTTCTATTGGGGAGGAAAAGAAGGTCAAATCCATCCAAATGTTTAAAACACCT
GTAGATAAGGCAATTAAAGGAGATCGAATTGGTATTGCAGTTACAAAATTGGATAGCAAA
AAGCTGGAGAGAGGTTTTGCATGTGACAAAGGCTATATTGAAATTGTTGACACAATTCTA
GCAAATGCTTCTAGAATCAGATTTTTCAAGAAGGAAATCAAAAACTCTGCAAAATATCAC
ATATCTATTGGGCATGAAACTGTTATGGGAAATGTTTCCCTTATCGCCAGAGCCAAGAAA
GAAGGCCTTTCAAGTAACATATTCGATACAACGGTAGAGTACTCTTTATTGGAGGAATTG
ACCGAAACAACTTATCAAGAAAAAGATGTTTTTGTTAAAATTGAATTTGAAAAACCAGTG
TGTTGCTATCCAAACTCTAATTATATTGCTTCCAAACTGGATACAGATATCAATGCGAAT
ATGTGTAGATTGGCATTCAATGGTAAAGTTATCAAGATGTGGAACAAATCCAATGTTTCC
AAAGAACAGCTTGTCAACTCTCTTCCTGTTTTTAAATACAAGGAAAAGAAAGCTGTAGTT
GATAGAGTTGTTGATGCCAACACAATTATTGGAAAAAATCTTCTCACTTCCAAAACTCAA
TCACTGCAATTTTTCATTGGAAAGAAGATTGATATTCTCATTGATGACCAACCAAGATTT
TCAGGTATAATTGATTCACCATTTGGCCAGAGTGGCAAATTCAAGGTT
//
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	match	25944	24395	398.33	-	.	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	cds	25944	25567	0.00	-	0	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	intron	25566	25522	0.00	-	.	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	cds	25521	24999	0.00	-	0	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	intron	24998	24959	0.00	-	.	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	cds	24958	24728	0.00	-	2	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	intron	24727	24691	0.00	-	.	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
gi|284093529|gb|GG738855.1|:subseq(40921,51007)	GeneWise	cds	24690	24395	0.00	-	2	gi|284093529|gb|GG738855.1|:subseq(40921,51007)-genewise-prediction-1
//