TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Homo sapiens # Complete
         (596 letters)

Database: H.arabidopsidis/genome.fa 
           5422 sequences; 67,459,135 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABWE01000269.1| Hyaloperonospora parasitica strain Emoy2 v-7....   324   3e-88
gb|ABWE01000221.1| Hyaloperonospora parasitica strain Emoy2 v-7....   117   7e-26
gb|ABWE01001623.1| Hyaloperonospora parasitica strain Emoy2 v-7....    85   4e-16
gb|ABWE01001607.1| Hyaloperonospora parasitica strain Emoy2 v-7....    85   4e-16
gb|ABWE01000059.1| Hyaloperonospora parasitica strain Emoy2 v-7....    85   4e-16
gb|ABWE01000915.1| Hyaloperonospora parasitica strain Emoy2 v-7....    70   7e-12
gb|ABWE01000203.1| Hyaloperonospora parasitica strain Emoy2 v-7....    59   3e-08
gb|ABWE01000505.1| Hyaloperonospora parasitica strain Emoy2 v-7....    58   5e-08
gb|ABWE01001227.1| Hyaloperonospora parasitica strain Emoy2 v-7....    57   6e-08
gb|ABWE01000450.1| Hyaloperonospora parasitica strain Emoy2 v-7....    56   1e-07

>gb|ABWE01000269.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont101.9, whole
            genome shotgun sequence
          Length = 54766

 Score =  324 bits (830), Expect = 3e-88
 Identities = 220/555 (39%), Positives = 310/555 (55%), Gaps = 30/555 (5%)
 Frame = -3

Query: 6    VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLR 65
            VNVNVGVLGH+DSGKT+L RALST  STAA DK PQS+ RGITLDLGFS F + +    R
Sbjct: 9593 VNVNVGVLGHVDSGKTSLVRALSTHLSTAALDKSPQSQRRGITLDLGFSSFRLDI----R 9426

Query: 66   SSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQT 125
               P F              LQVTLVDCPGH SL +T++GGA IID ++LV D  KG++ 
Sbjct: 9425 KGGPSF--------------LQVTLVDCPGHTSLFQTVLGGAAIIDTVVLVTDCRKGLEA 9288

Query: 126  QSAECLVIGQIAC-QKLVVVLNKIDLLP--EGKRQAAIDKMTKKMQKTLENTKFRGA--- 179
            Q+ E L++  + C +KLV+VL K DLL   + +R AAI  +T ++Q T   T F      
Sbjct: 9287 QTIESLLLASLVCPRKLVIVLTKTDLLSALDVERAAAIGAVTSEVQ-TFVATHFSSLKDV 9111

Query: 180  --PIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQ 237
              P++PV    G          +GIP L+E+L + +  P RD SG F ++VDHCF++ G 
Sbjct: 9110 TIPVVPVVVGTG-------HKTEGIPHLLEVLRTHLQAPERDTSGDFRLAVDHCFAVPGH 8952

Query: 238  GTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKL 297
            GTV+TGT+LSG++S G  +E+    +   VK++Q+F   +   +QGDR+G+ V   DP L
Sbjct: 8951 GTVLTGTVLSGALSKGSELELLPSGMKTTVKTLQVFRQDVERCVQGDRVGLRVNGLDPAL 8772

Query: 298  LERGL-VCAPESLHTVHAALISVEKIPYFR-GPLQTKAKFHITVGHETVMGRLMFFSP-A 354
            +ER L V  P SL  V   +I+V ++P F+ G  ++ AK H TVGH TV+    FF+   
Sbjct: 8771 VERALAVSPPGSLPAVTQVVIAVARVPLFQGGACKSGAKCHATVGHATVIATATFFARLG 8592

Query: 355  PDNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALV 414
                D   IL+   F    L+ E     D   +V D     K + +AT        +AL+
Sbjct: 8591 RTEGDAGNILEDM-FDPLALY-EYVPDLDFGYSVQDG----KNSTEAT------TIFALL 8448

Query: 415  EFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHG----ILLHGLEDRNYADSF------L 464
            +FE+ V CP   LV+ SRLD D    +CRLAF+G    ++    E+ +   S       L
Sbjct: 8447 QFERAVFCPPATLVVCSRLDLDAKRFSCRLAFYGTVECVVGSSSEELDMLSSVHRRVVNL 8268

Query: 465  PRLKVYKLKHKHGLVERAMDDYS--------VIGRSLFKKETNIQLFVGLKVHLSTGE-L 515
              +++ ++K + G+V++     S        VIGR +F K+    ++ GL V       L
Sbjct: 8267 GDIRIGRVKSRDGIVDKVSMSQSSSDAGGIDVIGRDMFSKDVRWSVYQGLAVLFEKARVL 8088

Query: 516  GIIDSAFGQSGKFKI 530
            GII   FG++GKF+I
Sbjct: 8087 GIILGPFGKTGKFRI 8043


>gb|ABWE01000221.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont110.7, whole
             genome shotgun sequence
          Length = 59955

 Score =  117 bits (292), Expect = 7e-26
 Identities = 94/332 (28%), Positives = 153/332 (46%), Gaps = 17/332 (5%)
 Frame = -1

Query: 7     NVNVGVLGHIDSGKTALARALSTTAST---------AAFDKQPQSRERGITLDLGFSCFS 57
             +VN+G +GH+D GKT L  A++   S          A  DK P+ R RGIT+        
Sbjct: 35052 HVNIGTIGHVDHGKTTLTAAITKVLSETGGAEFTSYADIDKAPEERARGITIST------ 34891

Query: 58    VPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVI 117
                            A  E E E          VDCPGHA  ++ +I GA  +D  +LV+
Sbjct: 34890 ---------------AHVEYETEKRH----YAHVDCPGHADYVKNMITGAAQMDGGILVV 34768

Query: 118   DVTKGMQTQSAECLVIG-QIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKF 176
                 G   Q+ E +++  Q+    LVV +NK+D + +   +  ++ +  ++++ LE   F
Sbjct: 34767 SAGDGPMPQTREHILLARQVGVPALVVFMNKVDQVDD---EELLELVEMEIRELLEAYDF 34597

Query: 177   RG--APIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSI 234
                  P++  +A               + +L++ + + I  P RD   PFLM V+  FSI
Sbjct: 34596 PADDIPVVQGSALAAVEGRDHAIGRDAVRKLMDEVDAYIPDPVRDFEKPFLMPVEDVFSI 34417

Query: 235   KGQGTVMTGTILSGSISLGDSVEIPALKVVKKV--KSMQMFHMPITSAMQGDRLGICVTQ 292
              G+GTV++G +  G I+ GD VE+  LK   K     ++MF   +     GD +G+ +  
Sbjct: 34416 SGRGTVVSGRVEQGVINTGDEVELVGLKPSFKTTCTGVEMFKKSLDRGQAGDNVGLLLRG 34237

Query: 293   FDPKLLERG-LVCAPESL--HTVHAALISVEK 321
                  + RG ++C P ++  HT   A + V K
Sbjct: 34236 LKRDEVLRGQVLCKPGTIDPHTKFEAEVYVLK 34141


>gb|ABWE01001623.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont148.1, whole
            genome shotgun sequence
          Length = 11272

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 38/343 (11%)
 Frame = +3

Query: 1    MAGRRVNVNVGVLGHIDSGKTAL----------------------ARALSTTASTAAF-- 36
            M   +V++++ V+GH+D+GK+                        A  L  T+   A+  
Sbjct: 7647 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVL 7826

Query: 37   DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
            D     RERGIT+D+    F                           P    T++D PGH
Sbjct: 7827 DNLKAERERGITIDIALWKFE-------------------------SPKFFFTVIDAPGH 7931

Query: 97   ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
               I+ +I G    D  +LV+          ++K  QT+    L+   +  +++VV +NK
Sbjct: 7932 RDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTRE-HALLAFTLGVKQMVVAINK 8108

Query: 148  IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGA--PIIPVAAKPGG---PEAPETEAPQGI 202
            +D       QA  +++  ++   L+   ++ A  P +P++   G      +P     +G 
Sbjct: 8109 MDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIERSPNMAWYKG- 8285

Query: 203  PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
            P L+E L + ++ P R    P  + +   + I G GTV  G + +G I  G       + 
Sbjct: 8286 PYLLEALDN-LNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVG 8462

Query: 263  VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305
            +  +VKS++M H  +  A+ GD +G  V     K L RG V +
Sbjct: 8463 LSTEVKSVEMHHESLPEALPGDNVGFNVKNVSVKELRRGFVAS 8591


>gb|ABWE01001607.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont20.11, whole
            genome shotgun sequence
          Length = 11417

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 20/292 (6%)
 Frame = -3

Query: 8    VNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSS 67
            +N+G +GH+  GK+ + +A+S    T  F  +    ER IT+ LG++   +   A   + 
Sbjct: 7836 INIGTIGHVAHGKSTVVKAISGV-QTVRFKNE---LERNITIKLGYANAKI-YRAENGTG 7672

Query: 68   LPEFQAAPEAEP-----EPGEPLL-----QVTLVDCPGHASLIRTIIGGAQIIDLMMLVI 117
            +  ++A   ++P     E  + L+      V+ VDCPGH  L+ T++ GA ++D  +L++
Sbjct: 7671 IGCYRAFGSSKPDRFTDETDDKLVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLV 7492

Query: 118  DVTKGM-QTQSAECLVIGQI-ACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTK 175
               +   Q Q++E L   +I   Q ++++ NK+DL+   K  AA+    ++++K +  T 
Sbjct: 7491 AGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLI---KEDAAV-AQHEQIKKFVAGTV 7324

Query: 176  FRGAPIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIK 235
               APIIP++A               +  + E +   I IP RD +    + V   F + 
Sbjct: 7323 AHDAPIIPISA----------VLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVN 7174

Query: 236  G--------QGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITS 279
                     +G V  G+IL G + +GD +E+    +V K +  +M  +PI S
Sbjct: 7173 KPGEDVENLKGGVAGGSILEGVLRVGDEIEVRP-GIVSKDEEGKMTCVPIFS 7021


>gb|ABWE01000059.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont71.2, whole
            genome shotgun sequence
          Length = 96583

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 38/343 (11%)
 Frame = +3

Query: 1    MAGRRVNVNVGVLGHIDSGKTAL----------------------ARALSTTASTAAF-- 36
            M   +V++++ V+GH+D+GK+                        A  L  T+   A+  
Sbjct: 6519 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVL 6698

Query: 37   DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
            D     RERGIT+D+    F                           P    T++D PGH
Sbjct: 6699 DNLKAERERGITIDIALWKFE-------------------------SPKFFFTVIDAPGH 6803

Query: 97   ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
               I+ +I G    D  +LV+          ++K  QT+    L+   +  +++VV +NK
Sbjct: 6804 RDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTRE-HALLAFTLGVKQMVVAINK 6980

Query: 148  IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGA--PIIPVAAKPGG---PEAPETEAPQGI 202
            +D       QA  +++  ++   L+   ++ A  P +P++   G      +P     +G 
Sbjct: 6981 MDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIERSPNMAWYKG- 7157

Query: 203  PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
            P L+E L + ++ P R    P  + +   + I G GTV  G + +G I  G       + 
Sbjct: 7158 PYLLEALDN-LNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVG 7334

Query: 263  VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305
            +  +VKS++M H  +  A+ GD +G  V     K L RG V +
Sbjct: 7335 LSTEVKSVEMHHESLPEALPGDNVGFNVKNVSVKELRRGFVAS 7463


>gb|ABWE01000915.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont125.2, whole
            genome shotgun sequence
          Length = 24112

 Score = 70.5 bits (171), Expect = 7e-12
 Identities = 88/380 (23%), Positives = 167/380 (43%), Gaps = 35/380 (9%)
 Frame = +2

Query: 5    RVNVNVGVLGHIDSGKTALARALS------TTASTAAFDKQPQSRERGITLDLGFSCFSV 58
            R ++NV ++GH+D+GK+ L+  L          +   ++++ + R R    D  F  + +
Sbjct: 4643 REHLNVVLIGHVDAGKSTLSGNLLYLMDMVDKRTIERYEREAKQRNR----DSWFLAYIM 4810

Query: 59   PLPARLRS---SLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMML 115
                  R+   ++   +A  E E        + T++D PGH + +  +I GA   D+ +L
Sbjct: 4811 DTGEEERTKGITVEVGRAHFETESR------RFTILDAPGHKNYVPNMIQGASQADVGLL 4972

Query: 116  VIDVTKGM---------QTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKK 166
            VI   KG          QT+    ++   +   KL+VV+NK+D       Q   D+   K
Sbjct: 4973 VISARKGEFETGFDRGGQTRE-HAMLAKTLGINKLIVVINKMD--EANWEQERFDECVNK 5143

Query: 167  MQKTLENTKF---RGAPIIPVAAKPG-GPEAP--ETEAPQGIPELIELLTSQISIPTRDP 220
            ++  L    F   R    IPV+   G   + P  + +AP    + +     ++ I  R+P
Sbjct: 5144 LRPFLRTCGFAVKRDVAFIPVSGLHGDNVKVPLDKAKAPWYEGDSLIDYMDKMHIANRNP 5323

Query: 221  SGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSA 280
             GP  + +   +S   +GT+  G + SG +  G  V +        V  + +  +P+ +A
Sbjct: 5324 DGPLRVPILDRYS--ERGTIALGKVESGVLVTGQKVVLMPTNTSAVVNQVFINELPVRTA 5497

Query: 281  MQGDRLGICVTQFDPKLLERGLVCA-------PESLHTVHAALISVEKIPYFRGPLQT-- 331
              G+ + I ++    + +++G V +       P ++H   A +  V+ + +   PL T  
Sbjct: 5498 KPGENVTIRLSSGLDE-VQKGFVLSGAKDDNPPRAIHAFAAQIALVDTLEH--RPLLTAG 5668

Query: 332  -KAKFHI-TVGHETVMGRLM 349
             K   HI TV  E ++ +L+
Sbjct: 5669 YKCILHIHTVAQECIVAKLL 5728


>gb|ABWE01000203.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont25.8, whole genome
             shotgun sequence
          Length = 61555

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 72/363 (19%), Positives = 130/363 (35%), Gaps = 80/363 (22%)
 Frame = -2

Query: 2     AGRRVNVNVGVLGHIDSGKTALARAL------------------------STTASTAAFD 37
             +G +  +++ V+GH+D+GK+ +   L                        S+ A     D
Sbjct: 53925 SGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESRDAGKSSFAYAWVMD 53746

Query: 38    KQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHA 97
                Q R RG+T+D+G S F                               VTL+D PGH 
Sbjct: 53745 ADEQERSRGVTMDVGTSYFETATK-------------------------HVTLLDAPGHR 53641

Query: 98    SLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE--------CLVIGQIACQKLVVVLNKID 149
               I  +I GA   D+ +LV+    G    + E         L++  +   ++VV +NK+D
Sbjct: 53640 DFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENSGQTKEHALLVRSLGVAQMVVAVNKMD 53461

Query: 150   LLPEGK----------------------RQAAIDKMTKKMQKTLENTKFR--GAPIIPVA 185
             ++                           Q   D + K +   L++  +R      +P++
Sbjct: 53460 MVRSAA*GSDRFTYTLVVYAAVYSQTNWDQERFDSIVKSLSTFLQHAGYRPKNLRFVPLS 53281

Query: 186   A-------KPGGPEAPETEAPQGIPELI-----ELLTSQI------------SIPTRDPS 221
                     K GG +     +   + E I     E++ + I            + P R  S
Sbjct: 53280 GMTGINLEKTGGVKECSWYSGPSLVEAIGTC*CEVIRAGIMCKIFYRCADSFAPPQRQIS 53101

Query: 222   GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAM 281
              PF M+V         G  ++G + +G+ ++GDSV     +  +  + +   H+P    +
Sbjct: 53100 KPFRMTVSDVSKSLSLGQSISGRVYAGAAAVGDSVSEVLTQQQQNDRVLYSSHVPTVVTV 52921

Query: 282   QGD 284
               D
Sbjct: 52920 LAD 52912


>gb|ABWE01000505.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont131.7, whole
             genome shotgun sequence
          Length = 38692

 Score = 57.8 bits (138), Expect = 5e-08
 Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
 Frame = -1

Query: 10    VGVLGHIDSGKTALARAL--STTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSS 67
             V V+GH+D GKT L  AL  S  A+T A          GIT  +G   FSV L  + +S 
Sbjct: 21487 VSVMGHVDHGKTTLLDALRKSNVAATEA---------GGITQRIG--AFSVDLGKKFKSH 21341

Query: 68    LPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQS 127
                                +VT +D PGHA+       G+++ DL++LV+    G++ Q+
Sbjct: 21340 ------------------SKVTFIDTPGHAAFCNMRSRGSELTDLLVLVVAADDGVRPQT 21215

Query: 128   AECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG-APIIPVAA 186
              E   +       LVV + K+D+    K +      T+ +++ +      G  P++ V+ 
Sbjct: 21214 VEVARLALKNNVPLVVAVTKMDMHEHDKNEVTNRLGTELLKQGIVVESMGGETPMVCVSG 21035

Query: 187   KPG 189
             K G
Sbjct: 21034 KTG 21026


>gb|ABWE01001227.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont144.1, whole
            genome shotgun sequence
          Length = 17159

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 30/293 (10%)
 Frame = -1

Query: 12   VLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEF 71
            ++GH+D+GKT L   +  T       K   +   GIT  +G + F V    +  + L E 
Sbjct: 2387 IMGHVDTGKTKLLDNIRKT-------KVQDAEAGGITQQIGATFFPVEAIKQKTARLIET 2229

Query: 72   QAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL 131
                   P        + ++D PGH S       G+ + D+ +LV+D+  G++ Q+ E L
Sbjct: 2228 MKLEFRLPG-------LLVIDTPGHESFTNLRNRGSSLCDIAILVVDIMHGLEPQTLESL 2070

Query: 132  VIGQIACQKLVVVLNKID------LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVA 185
             + +      VV LNKID       +P+   Q A+    + + +  E+     A I+  A
Sbjct: 2069 RLLRQKKAPFVVALNKIDRCYGWKTMPDMPIQEALKHQNEHVIREFEDR--MKAIIVEFA 1896

Query: 186  AKPGGPEA---------------PETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVD- 229
             +    E                    + +G+P+L+ +LT      T++     L  VD 
Sbjct: 1895 EQKLNAEVYWRNKNLANTVSLIPTSAISGEGVPDLLMMLTRL----TQERMAKSLAFVDI 1728

Query: 230  ------HCFSIKGQGTVMTGTILSGSISLGDSVEIPAL--KVVKKVKSMQMFH 274
                      I+G GT +   +++G++  G ++ +  L   VV  ++S+   H
Sbjct: 1727 LQCTVLEVKVIEGLGTTIDTILVNGTLVEGSTIVVCTLDGPVVTSIRSLLTPH 1569


>gb|ABWE01000450.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont42.3, whole genome
             shotgun sequence
          Length = 41855

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 11/255 (4%)
 Frame = -2

Query: 9     NVGVLGHIDSGKTALARAL-----STTASTAAFDKQPQSRERGITLDLGFSCFSVPLPAR 63
             NV ++ H+D GKT L   L     +T +     D     RERGIT+     C  V     
Sbjct: 27118 NVAIVAHVDHGKTTLVDQLLKHGGNTLSEERVMDSIDLERERGITIMS--KCTRVEYNGH 26945

Query: 64    LRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM 123
             +                       + +VD PGHA     +     ++D ++LV+D T+G 
Sbjct: 26944 V-----------------------LNIVDTPGHADFGGEVERILSMVDGVVLVVDATEGP 26834

Query: 124   QTQSAECLVIGQIACQKLVVVLNKID---LLPEGKRQAAIDKMTKKMQKTLENTKFRGAP 180
              +Q+   L        K +VV+NK+D      +G  +  +  M   +    +  +F   P
Sbjct: 26833 MSQTKFVLTKALHRGLKPLVVVNKVDRDTSRLDGSVENELFDMFVALDADDDQLEF---P 26663

Query: 181   IIPVAAKPGGPEAP---ETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQ 237
             ++  +AK G        E+E    +  L++ +T  +  P  +   PF M+V         
Sbjct: 26662 VLYASAKQGWAVRDLDNESEMRDSMMPLLDEITRYVPAPEANSDKPFAMAVTMIGHDPYV 26483

Query: 238   GTVMTGTILSGSISL 252
             G + TG + +G++ +
Sbjct: 26482 GRLATGRVHAGAVKV 26438


  Database: H.arabidopsidis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 67,459,135
  Number of sequences in database:  5422
  
Lambda     K      H
   0.319    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,183,891
Number of Sequences: 5422
Number of extensions: 650962
Number of successful extensions: 2645
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 2179
Number of HSP's gapped (non-prelim): 768
length of query: 596
length of database: 22,486,378
effective HSP length: 111
effective length of query: 485
effective length of database: 21,884,536
effective search space: 10613999960
effective search space used: 10613999960
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 118 (50.1 bits)