TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Homo sapiens # Complete
         (596 letters)

Database: B.hominis/genome.fa 
           54 sequences; 18,817,245 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|FN668672.1| Blastocystis hominis, Singapore isolate B (sub-t...   122   4e-44
emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-t...    85   8e-17
emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-t...    85   8e-17
emb|FN668683.1| Blastocystis hominis, Singapore isolate B (sub-t...    85   8e-17
emb|FN668690.1| Blastocystis hominis, Singapore isolate B (sub-t...    85   8e-17
emb|FN668655.1| Blastocystis hominis, Singapore isolate B (sub-t...    49   9e-06

>emb|FN668672.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_4
          Length = 1031885

 Score =  122 bits (307), Expect(2) = 4e-44
 Identities = 56/97 (57%), Positives = 75/97 (77%)
 Frame = -3

Query: 86     LQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVL 145
              +Q TLVDCPGHASLIRTI+GGAQIID++++VID  KG+Q Q+AEC+VIG+I   K ++ L
Sbjct: 741621 IQYTLVDCPGHASLIRTILGGAQIIDMLIIVIDCLKGIQAQTAECIVIGEITTNKAIIAL 741442

Query: 146    NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPII 182
              NKIDL+PE +R   I  +   +QKTL  T+F+ A I+
Sbjct: 741441 NKIDLIPEAERSDRIKTVISSLQKTLSKTRFKNASIV 741331



 Score =  100 bits (250), Expect = 1e-21
 Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 21/144 (14%)
 Frame = -2

Query: 204    ELIELLTSQISIPTR-DPS----------GPFLMSVDHCFSIKGQGTVMTGTILSGSISL 252
              EL+  +   +SIP + DP            P     DHCF + G+G VMTGT+LSGS+S+
Sbjct: 741205 ELVNQIRGMVSIPNKIDPCT*ELVVS*IVAPLYFIYDHCFQLAGKGCVMTGTVLSGSVSV 741026

Query: 253    GDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICV----------TQFDPKLLERGL 302
               D +E P+L + +KVKS+QMFH  I   ++GDR GICV            FD K  ERG 
Sbjct: 741025 NDEIEFPSLHLTRKVKSIQMFHKGIDKVLKGDRAGICVQ*FLIIKVTSRSFDFK-SERGE 740849

Query: 303    VCAPESLHTVHAALISVEKIPYFR 326
               CA  SL  +   LI ++KI +++
Sbjct: 740848 ACAVGSLKAMQNILIRLKKIRFYK 740777



 Score = 74.3 bits (181), Expect(2) = 4e-44
 Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 10/70 (14%)
 Frame = -1

Query: 7      NVNVGVLGHIDSGKTALAR----------ALSTTASTAAFDKQPQSRERGITLDLGFSCF 56
              N+NVGV+GH+DSGKT+L +          +LS   STA+ DK PQSR+RGITLDLGFS F
Sbjct: 741875 NINVGVMGHVDSGKTSLGKKFTNI*ILVKSLSAILSTASLDKNPQSRQRGITLDLGFSAF 741696

Query: 57     SVPLPARLRS 66
                 +P+ + S
Sbjct: 741695 LSDIPSHISS 741666



 Score = 51.6 bits (122), Expect(2) = 2e-12
 Identities = 28/86 (32%), Positives = 52/86 (60%)
 Frame = -1

Query: 411    WALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVY 470
              WAL++ E+ +  P   L+IGS+L++ +   TCR+AF+  ++  L  +      L  L+V+
Sbjct: 740312 WALLQLEQTIYAPLGALLIGSQLNSQV-DGTCRIAFYAKVIQALSPKK---EDLSVLRVF 740145

Query: 471    KLKHKHGLVERAMDDYSVIGRSLFKK 496
              K K +  +V+R +++  VIG +L +K
Sbjct: 740144 KPKQRTAIVDRIVNEREVIGTNLTEK 740067



 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
 Frame = +2

Query: 9      NVGVLGHIDSGKTALARALST--------TASTAAF-DKQPQSRERGITL-DLGFSCFSV 58
              N+ V+ H+D GK+ L  AL +         A  A F D +   +ER IT+   G S +  
Sbjct: 325010 NLSVVAHVDHGKSTLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYFE 325189

Query: 59     PLPARLRSSL----PEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMM 114
                P  +  +     PE +A  E   E       + L+D PGH      +    ++ D  +
Sbjct: 325190 YDPETIDKAASVATPEGEAVEEENVEIKHNSYLINLIDSPGHVDFSSEVTAALRVTDGAL 325369

Query: 115    LVIDVTKGMQTQSAECL-------VIGQIACQKLVVVLNKIDLLPE 153
              +V+D   G+  Q+   L       +   + C KL  V++++ L PE
Sbjct: 325370 VVVDSVGGVCVQTETVLRQALTERIRPVLMCNKLDRVISELQLDPE 325507



 Score = 38.9 bits (89), Expect(2) = 2e-12
 Identities = 28/92 (30%), Positives = 39/92 (42%)
 Frame = -3

Query: 503    FVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEATRQ 562
              FVGL V   +G  G ID+ FG+SGKFK+                               +
Sbjct: 740016 FVGLDVVTKSGLKGRIDAPFGKSGKFKV----------------------------VFSE 739921

Query: 563    EESAERSEPSQHVVLSLTFKRYVFDTHKRMVQ 594
              E   E++E        + FKRYVFD  K+++Q
Sbjct: 739920 EHHLEKNEE-----FVINFKRYVFDKEKKIIQ 739840


>emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_1
          Length = 1866585

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 38/342 (11%)
 Frame = +3

Query: 1      MAGRRVNVNVGVLGHIDSGKTALA------------RALSTTASTA------------AF 36
              M   + ++N+ V+GH+DSGK+               R +      A              
Sbjct: 245553 MGKEKPHINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVL 245732

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
              DK    RERGIT+D+               SL +FQ                T++D PGH
Sbjct: 245733 DKMKAERERGITIDI---------------SLWKFQTEKYF----------FTIIDAPGH 245837

Query: 97     ASLIRTIIGGAQIIDLMMLVI-------DVTKGMQTQSAE-CLVIGQIACQKLVVVLNKI 148
                 I+ +I G    D+ +L+I       +   G   Q+ E  L+   +  ++++  +NK+
Sbjct: 245838 RDFIKNMITGTSQADVAILIIAAGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKM 246017

Query: 149    DLLPEGKRQAAIDKMTKKMQKTLENTKFRGA----PIIPVAAKPGGPEAPETEAPQGI-- 202
              D       +A   ++  +M   L    ++      P IP++   G      +        
Sbjct: 246018 DDKSVNYSEARYKEIKAEMTSFLTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKG 246197

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              P LIE L + I  P R    P  + +   + I G GTV  G + +G +  G +V    + 
Sbjct: 246198 PTLIEALDN-IHPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVG 246374

Query: 263    VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
              V  +VKS++M H  I  A+ GD +G  V     K + RG VC
Sbjct: 246375 VTTEVKSVEMHHESIPQALPGDNVGFNVKNVSVKDIHRGNVC 246500



 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 38/342 (11%)
 Frame = +1

Query: 1      MAGRRVNVNVGVLGHIDSGKTALA------------RALSTTASTA------------AF 36
              M   + ++N+ V+GH+DSGK+               R +      A              
Sbjct: 668956 MGKEKPHINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVL 669135

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
              DK    RERGIT+D+               SL +FQ                T++D PGH
Sbjct: 669136 DKMKAERERGITIDI---------------SLWKFQTEKYF----------FTIIDAPGH 669240

Query: 97     ASLIRTIIGGAQIIDLMMLVI-------DVTKGMQTQSAE-CLVIGQIACQKLVVVLNKI 148
                 I+ +I G    D+ +L+I       +   G   Q+ E  L+   +  ++++  +NK+
Sbjct: 669241 RDFIKNMITGTSQADVAILIIAAGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKM 669420

Query: 149    DLLPEGKRQAAIDKMTKKMQKTLENTKFRGA----PIIPVAAKPGGPEAPETEAPQGI-- 202
              D       +A   ++  +M   L    ++      P IP++   G      +        
Sbjct: 669421 DDKSVNYSEARYKEIKAEMTSFLTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKG 669600

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              P LIE L + I  P R    P  + +   + I G GTV  G + +G +  G +V    + 
Sbjct: 669601 PTLIEALDN-IHPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVG 669777

Query: 263    VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
              V  +VKS++M H  I  A+ GD +G  V     K + RG VC
Sbjct: 669778 VTTEVKSVEMHHESIPQALPGDNVGFNVKNVSVKDIHRGNVC 669903



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
 Frame = +3

Query: 4       RRVNVNVGVLGHIDSGKTALARALSTT------ASTAAFD---KQPQSRERGITLDLGFS 54
               ++ + N+G +GH+D GKT L  A++        A  +A+D   K P+ R RGIT++    
Sbjct: 1540623 KKPHCNIGTIGHVDHGKTTLTAAITKVLAEKNLAEFSAYDQIDKAPEERARGITIN---- 1540790

Query: 55      CFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMM 114
                          S+  E++                  VDCPGHA  ++ +I GA  +D  +
Sbjct: 1540791 -----------STHVEYETENR----------HYAHVDCPGHADYVKNMITGAAQMDGAI 1540907

Query: 115     LVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKIDLLPE 153
               LV+    G   Q+ E +++  Q+    + V +NKIDL+ +
Sbjct: 1540908 LVVSAVDGPMPQTREHILLAHQVGVPNIAVFMNKIDLVDD 1541027



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +1

Query: 216     PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK--VVKKVKSMQMF 273
               PTR     FLM+++  +SI+G+GTV+TG +  G + +GD+VEI  LK  +   V  ++MF
Sbjct: 1541269 PTRQLDKDFLMAIEDVYSIQGRGTVVTGRVEQGRVKVGDAVEICGLKPTLSTVVTGVEMF 1541448

Query: 274     HMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESLHTVH 313
               H  +     GD +G+ +     + + RG LV  P+S+   H
Sbjct: 1541449 HKSMNEGQAGDNVGLLLRGVKREEVLRGQLVAKPKSVKVHH 1541571


>emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_2
          Length = 1458350

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 38/342 (11%)
 Frame = -3

Query: 1      MAGRRVNVNVGVLGHIDSGKTALA------------RALSTTASTA------------AF 36
              M   + ++N+ V+GH+DSGK+               R +      A              
Sbjct: 991638 MGKEKPHINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVL 991459

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
              DK    RERGIT+D+               SL +FQ                T++D PGH
Sbjct: 991458 DKMKAERERGITIDI---------------SLWKFQTEKYF----------FTIIDAPGH 991354

Query: 97     ASLIRTIIGGAQIIDLMMLVI-------DVTKGMQTQSAE-CLVIGQIACQKLVVVLNKI 148
                 I+ +I G    D+ +L+I       +   G   Q+ E  L+   +  ++++  +NK+
Sbjct: 991353 RDFIKNMITGTSQADVAILIIAAGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKM 991174

Query: 149    DLLPEGKRQAAIDKMTKKMQKTLENTKFRGA----PIIPVAAKPGGPEAPETEAPQGI-- 202
              D       +A   ++  +M   L    ++      P IP++   G      +        
Sbjct: 991173 DDKSVNYSEARYKEIKAEMTSFLTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKG 990994

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              P LIE L + I  P R    P  + +   + I G GTV  G + +G +  G +V    + 
Sbjct: 990993 PTLIEALDN-IHPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVG 990817

Query: 263    VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
              V  +VKS++M H  I  A+ GD +G  V     K + RG VC
Sbjct: 990816 VTTEVKSVEMHHESIPQALPGDNVGFNVKNVSVKDIHRGNVC 990691


>emb|FN668683.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_5
          Length = 953317

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 38/342 (11%)
 Frame = -1

Query: 1      MAGRRVNVNVGVLGHIDSGKTALA------------RALSTTASTA------------AF 36
              M   + ++N+ V+GH+DSGK+               R +      A              
Sbjct: 579607 MGKEKPHINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVL 579428

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
              DK    RERGIT+D+               SL +FQ                T++D PGH
Sbjct: 579427 DKMKAERERGITIDI---------------SLWKFQTEKYF----------FTIIDAPGH 579323

Query: 97     ASLIRTIIGGAQIIDLMMLVI-------DVTKGMQTQSAE-CLVIGQIACQKLVVVLNKI 148
                 I+ +I G    D+ +L+I       +   G   Q+ E  L+   +  ++++  +NK+
Sbjct: 579322 RDFIKNMITGTSQADVAILIIAAGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKM 579143

Query: 149    DLLPEGKRQAAIDKMTKKMQKTLENTKFRGA----PIIPVAAKPGGPEAPETEAPQGI-- 202
              D       +A   ++  +M   L    ++      P IP++   G      +        
Sbjct: 579142 DDKSVNYSEARYKEIKAEMTSFLTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKG 578963

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              P LIE L + I  P R    P  + +   + I G GTV  G + +G +  G +V    + 
Sbjct: 578962 PTLIEALDN-IHPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVG 578786

Query: 263    VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
              V  +VKS++M H  I  A+ GD +G  V     K + RG VC
Sbjct: 578785 VTTEVKSVEMHHESIPQALPGDNVGFNVKNVSVKDIHRGNVC 578660



 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
 Frame = +1

Query: 45     RGITLDLGFS------CFSVPLPARLRSSL---------PEFQAAPEAEPEPGEP----- 84
              R IT+ LG++      C +   PA   S L           + +  E  P+   P     
Sbjct: 798733 RNITIKLGYANAKIYKCDNPDCPAYGMSRLGLISSPDCYASYSSDKELHPKCQRPGCGGT 798912

Query: 85     ---LLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQI-ACQ 139
                 L  ++ VDCPGH  L+ T++ GA ++D  +L+I   +   Q Q++E L   +I   Q
Sbjct: 798913 MNLLRHISFVDCPGHDVLMATMLSGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMKLQ 799092

Query: 140    KLVVVLNKI----------DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPG 189
               L+++ NKI          DL+   KR+ A+ +    ++K +  T    APIIP++A   
Sbjct: 799093 NLIILQNKIGRFLAVC*MVDLI---KREQALVQF-DSIRKFVSGTVAEKAPIIPISA--- 799251

Query: 190    GPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIK--GQ------GTVM 241
                     +    I  + E + + I +P RD +    M V   F +   GQ      G V 
Sbjct: 799252 -------QLKYNIDVVCEYIVNTIPLPVRDYASAPQMIVIRSFDVNKPGQRAEELKGGVA 799410

Query: 242    TGTILSGSISLGDSVEI 258
               G+IL G + LGD +EI
Sbjct: 799411 GGSILKGVLQLGDEIEI 799461


>emb|FN668690.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_8
          Length = 854764

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 38/342 (11%)
 Frame = +2

Query: 1      MAGRRVNVNVGVLGHIDSGKTALA------------RALSTTASTA------------AF 36
              M   + ++N+ V+GH+DSGK+               R +      A              
Sbjct: 251885 MGKEKPHINLVVIGHVDSGKSTTTGHLIYACGGIDKRTIERFEKEANEIGKGSFKYAWVL 252064

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGH 96
              DK    RERGIT+D+               SL +FQ                T++D PGH
Sbjct: 252065 DKMKAERERGITIDI---------------SLWKFQTEKYF----------FTIIDAPGH 252169

Query: 97     ASLIRTIIGGAQIIDLMMLVI-------DVTKGMQTQSAE-CLVIGQIACQKLVVVLNKI 148
                 I+ +I G    D+ +L+I       +   G   Q+ E  L+   +  ++++  +NK+
Sbjct: 252170 RDFIKNMITGTSQADVAILIIAAGTGEFEAGYGKNGQTREHALLANTLGVKQMICCVNKM 252349

Query: 149    DLLPEGKRQAAIDKMTKKMQKTLENTKFRGA----PIIPVAAKPGGPEAPETEAPQGI-- 202
              D       +A   ++  +M   L    ++      P IP++   G      +        
Sbjct: 252350 DDKSVNYSEARYKEIKAEMTSFLTKVGYQKVEERIPFIPISGFNGDNMLERSANMPWYKG 252529

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              P LIE L + I  P R    P  + +   + I G GTV  G + +G +  G +V    + 
Sbjct: 252530 PTLIEALDN-IHPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMTVTFAPVG 252706

Query: 263    VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
              V  +VKS++M H  I  A+ GD +G  V     K + RG VC
Sbjct: 252707 VTTEVKSVEMHHESIPQALPGDNVGFNVKNVSVKDIHRGNVC 252832



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
 Frame = +2

Query: 4      RRVNVNVGVLGHIDSGKTALARALSTT------ASTAAFD---KQPQSRERGITLDLGFS 54
              ++ + N+G +GH+D GKT L  A++        A  +A+D   K P+ R RGIT++    
Sbjct: 528440 KKPHCNIGTIGHVDHGKTTLTAAITKVLAEKNLAEFSAYDQIDKAPEERARGITIN---- 528607

Query: 55     CFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMM 114
                         S+  E++                  VDCPGHA  ++ +I GA  +D  +
Sbjct: 528608 -----------STHVEYETENR----------HYAHVDCPGHADYVKNMITGAAQMDGAI 528724

Query: 115    LVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKIDLLPE 153
              LV+    G   Q+ E +++  Q+    + V +NKIDL+ +
Sbjct: 528725 LVVSAVDGPMPQTREHILLAHQVGVPNIAVFMNKIDLVDD 528844



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +3

Query: 216    PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK--VVKKVKSMQMF 273
              PTR     FLM+++  +SI+G+GTV+TG +  G + +GD+VEI  LK  +   V  ++MF
Sbjct: 529086 PTRQLDKDFLMAIEDVYSIQGRGTVVTGRVEQGRVKVGDAVEICGLKPTLSTVVTGVEMF 529265

Query: 274    HMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESLHTVH 313
              H  +     GD +G+ +     + + RG LV  P+S+   H
Sbjct: 529266 HKSMNEGQAGDNVGLLLRGVKREEVLRGQLVAKPKSVKVHH 529388


>emb|FN668655.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
             shotgun sequence assembly, scaffold_24
          Length = 222987

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
 Frame = -1

Query: 9     NVGVLGHIDSGKTALARALST--------TASTAAF-DKQPQSRERGITL-DLGFSCFSV 58
             N+ V+ H+D GK+ L  AL +         A  A F D +   +ER IT+   G S +  
Sbjct: 29988 NLSVVAHVDHGKSTLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYFE 29809

Query: 59    PLPARLRSSL----PEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMM 114
               P  +  +     PE +A  E   E       + L+D PGH      +    ++ D  +
Sbjct: 29808 YDPETIDKAASVATPEGEAVEEENVEIKHNSYLINLIDSPGHVDFSSEVTAALRVTDGAL 29629

Query: 115   LVIDVTKGMQTQSAECL-------VIGQIACQKLVVVLNKIDLLPE 153
             +V+D   G+  Q+   L       +   + C KL  V++++ L PE
Sbjct: 29628 VVVDSVGGVCVQTETVLRQALTERIRPVLMCNKLDRVISELQLDPE 29491


  Database: B.hominis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 18,817,245
  Number of sequences in database:  54
  
Lambda     K      H
   0.319    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,953,890
Number of Sequences: 54
Number of extensions: 186604
Number of successful extensions: 1143
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 861
Number of HSP's gapped (non-prelim): 461
length of query: 596
length of database: 6,272,415
effective HSP length: 102
effective length of query: 494
effective length of database: 6,266,907
effective search space: 3095852058
effective search space used: 3095852058
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)