genewise output
Score 140.37 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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                 599 EPPGTELQRDTEASHLAPNHTTFPKIHSRRFRD---YCSQMLSKEVDAC 
                     E P +E+ R    SH          +HS  +     YCSQ +  E+D+  
                     EAPFSEVSRVKRCSHCLVRVVFAHSVHSHSLPQSHRYCSQKVGAELDSA 
supercontig_1.124590 ggctaggtcgacttctcgcggtgctgctctccctcattacaggggcgtg 
                     acctgatcgtaggcagttgtttcactacactcacagaggaatgcatacc 
                     aaaccgtgaagctgttccatgttttgcattcgaccgcctagcctgtttt 


                 645 VTDLLKELVRFQDR-MYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCV 
                        +LK+L +FQ+R +   DP KAK +R  V+GL+EV KHL+  KL+C+ 
                     TAIVLKQLHKFQERRLATIDPNKAKQRRWFVVGLKEVFKHLQRGKLRCL 
supercontig_1.124737 agagcacccatcgcccgaagcaagacccttgggcaggtaccccgatctc 
                     cctttaataataaggtcctacaacaagggtttgtaattaataggatggt 
                     agtggaaccgcaaaaccaacgcgcagccgtctccgagcgttaacagatc 


                 693 IISPNCEKIQSK                          GLDDTLHTIID 
                     I++P+ E ++S                           GLDD + +I+  
                     IVAPDIESVRSA          G:G[ggt]        GLDDAISSILT 
supercontig_1.124884 aggcgagagctgGGTAAGAT  Intron 1   CAGGTgcgggaatata 
                     ttccatagtgcc <1-----[24921:25000]-1>  gtaactgcttc 
                     ctgactgcgcgg                          cgctaacatag 


                 717 YACEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVEL 
                      A  Q+ P VFALNR+ + R+LN  VPVS VGIF++DG   ++  M+   
                     EAHAQDRPVVFALNRRKIARALNIHVPVSAVGIFTFDGLHQEYKSMLLQ 
supercontig_1.125036 ggcgcgccggtgtaccaagcgtaacgcgagggatatggcccgtatactc 
                     acacaagctttctaggatcgctatatctgctgttctagtaaaaacttta 
                     aacaacggggtcgtcgacacagctctagtcttttccccgtagcgagggg 


                 766 TVAARQAYKTMLENVQQELVGEPRPQA                       
                     +   R AY  MLE    + V  P P A                       
                     STEGRLAYFAMLEATHAQWVETPPPTA                       
supercontig_1.125183 taggacgttgacggacgctggacccag                       
                     ccaggtcatcttaccacagtacccccc                       
                     agacgggttcgaacctgagcaagaatt                       


//
Making a G in phase 1 intron
>supercontig_1.14:subseq(63435,113794).pep
EAPFSEVSRVKRCSHCLVRVVFAHSVHSHSLPQSHRYCSQKVGAELDSATAIVLKQLHKF
QERRLATIDPNKAKQRRWFVVGLKEVFKHLQRGKLRCLIVAPDIESVRSAGGLDDAISSI
LTEAHAQDRPVVFALNRRKIARALNIHVPVSAVGIFTFDGLHQEYKSMLLQSTEGRLAYF
AMLEATHAQWVETPPPTA
//
>supercontig_1.14:subseq(63435,113794).[24590:25263].sp
GAAGCACCATTCAGCGAGGTTTCGCGAGTAAAGCGCTGTTCGCATTGTCTCGTCCGAGTT
GTGTTTGCTCATTCTGTGCACTCACATTCTCTCCCGCAATCCCACAGGTACTGCAGTCAA
AAGGTCGGCGCTGAGCTTGATTCTGCTACAGCGATTGTGCTGAAACAACTCCACAAGTTC
CAAGAACGACGACTCGCCACAATAGACCCGAACAAGGCCAAACAGCGCCGCTGGTTTGTC
GTTGGCCTCAAGGAAGTGTTCAAGCATCTTCAACGAGGCAAATTGCGATGTCTCATCGTT
GCGCCAGACATTGAGAGCGTGCGCTCGGCGGGTGGCCTGGACGATGCAATAAGCTCAATT
TTAACGGAAGCACACGCACAAGACCGGCCGGTGGTGTTTGCCTTGAATCGCCGGAAAATC
GCACGCGCATTGAACATTCACGTTCCAGTGAGTGCCGTTGGTATTTTTACCTTCGACGGC
CTGCATCAAGAGTACAAGTCAATGCTGTTGCAGTCAACGGAAGGCAGGCTGGCGTATTTT
GCCATGCTAGAAGCCACCCATGCGCAATGGGTCGAAACACCGCCACCAACTGCT
//
supercontig_1.14:subseq(63435,113794)	GeneWise	match	24590	25263	142.37	+	.	supercontig_1.14:subseq(63435,113794)-genewise-prediction-1
supercontig_1.14:subseq(63435,113794)	GeneWise	cds	24590	24920	0.00	+	0	supercontig_1.14:subseq(63435,113794)-genewise-prediction-1
supercontig_1.14:subseq(63435,113794)	GeneWise	intron	24921	25000	0.00	+	.	supercontig_1.14:subseq(63435,113794)-genewise-prediction-1
supercontig_1.14:subseq(63435,113794)	GeneWise	cds	25001	25263	0.00	+	2	supercontig_1.14:subseq(63435,113794)-genewise-prediction-1
//