T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=89
*
BAD AVG GOOD
*
H.sapiens : 86
C.muris : 93
C.owczarzaki : 89
C.parvum : 93
N.gurberi : 85
P.tricornutum : 89
T.trahens : 92
cons : 89
H.sapiens MASEGPREPESEGIKLSADV------------------KPFVPRF
C.muris ---------------------------------------------
C.owczarzaki EA-------------------------------------------
C.parvum ---------------------------------------------
N.gurberi NL--------------GAALKLAKSTNTMTDDESSTKKA------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens AGLNVAWLESSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFG
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens ASTFPPQYLSSEITLHP----------------YAYSPYTLDSTQ
C.muris ---------------------------------------------
C.owczarzaki ----------------P----------------FS----------
C.parvum ---------------------------------------------
N.gurberi ----------------PTSTTSASTSQSTESSPK-----------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens NVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKK
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens TYDEKKTYDQQKFDSERADGTISSEIKSARGSHHLSIYAENSLKS
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ----------KKFRKT-----------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens DGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEI
C.muris ---------------------------------------------
C.owczarzaki -------------------------------------------EV
C.parvum ---------------------------------------------
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens QKQPKWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVT
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens ANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLK
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens TIASSADPKNVSIPSSEALSSDPSYN-KEKHIIHPTQKSKA-SQG
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi ----------KSDSSSSSSSSDSDSDAEMKETPKETQKSKKESSS
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens SDLEQNEASRKNKKK-KEKSTSKYEVLTVQEPPRIEDAEEFPNLA
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi SDSSSDEEMKDDEKKPTPKPTETKQVITKKDSSDSSDS-------
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens VASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTA
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi -------------------SSDSSEDEKKPVSKPIQPKPVTKKDS
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens LEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKT
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi SSDSDSSSSSEDEKKPTPKPTETKPVITKKDSSSDSDSSSDSSDD
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens PHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQ
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi EKKPEDEKKPVSKPAVQTKPIAAKKDSSDSSSDSSSEDEKKPTPK
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens ENAVSPAFTS-DDTQDGESGGDDQFPEQAELSGPEGMDELISTPS
C.muris ---------------------------------------------
C.owczarzaki ---------------------------------------------
C.parvum ---------------------------------------------
N.gurberi PTETKPVITKKDSSSDSDSSSDSSDDEKKPVSKPAVQPKPVTKKD
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens VEDKSEEPPGTELQRDTEA--------SHLAPNHTTFPKIHSRRF
C.muris ---------------------------------------------
C.owczarzaki -------------SRVKRCSHCLVRVVFAHSVHSHSLPQS-----
C.parvum ---------------------------------------------
N.gurberi SSSDSDSSSSSEDEKKPAG--------SSIAVNKNTVPDSNERKI
P.tricornutum ---------------------------------------------
T.trahens ---------------------------------------------
cons
H.sapiens RDYCSQMLSKEVDACVTDLLKELVRFQDR-MYQKDPVKAKTKRRL
C.muris QNYVTQILTASLDRAVSTLLNTLRAIDDR-VRWMSSGVSSKGRVF
C.owczarzaki HRYCSQKVGAELDSATAIVLKQLHKFQERRLATIDPNKAKQRRWF
C.parvum QNYVNQILTASLDHSVSILLNTLRAIDDR-VRWMSTVVNSKRRVF
N.gurberi REYVNYPLDPDYENIIFQMLTKLQFYQFR-LKKTDKKKFKQRLRY
P.tricornutum RPYATLISDESVKPLLTEMFGELMRLQKR-AVDE--NNTKVKRRL
T.trahens REYVDQLVPPELNRLIPPMLKELSRLQER-ARVLNPTKA--KRRL
cons : * . . :: * : *
H.sapiens VLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYA
C.muris TVGVREAMRCLRHKKLQALIVAPDIEGGDIEGGLRHHVIHILMQA
C.owczarzaki VVGLKEVFKHLQRGKLRCLIVAPDIESVRSAGGLDDAISSILTEA
C.parvum TVGVREAMRCLRHKKLKALIVAPDIEGDGVEGSLRHHVIHILLQA
N.gurberi VIGIREVLKGLKLKHIRAVVIAPNIDKVTTPGGLDTKIEEIIQKC
P.tricornutum VMGLREVARGIRSHKVKLVAMANNLDD---YGAIDEKLQEILDLA
T.trahens VTGLREVVKFVKVGTAKAVIVAPDIEKVEADGGLDDKIAFIRTRA
cons . *::*. : :: : : :: : : *.: : * .
H.sapiens CEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMV
C.muris QEFNIPVIFALNRHRIGRAMGKHMRMSVLGLLSTRGVERQFQTVA
C.owczarzaki HAQDRPVVFALNRRKIARALNIHVPVSAVGIFTFDGLHQEYKSML
C.parvum QELNIPTIFALNRHRIGRAMGKHMRMSVLGLLSIRGVEKQFQAIS
N.gurberi NEQELPVFFALTKKKLGTAMKTSTKISLVGLYSMDGAFDEFKKAK
P.tricornutum DENEVPIFYEFTKRALGKVMGKTVKIAVVGVQNAEGAHQQFKKLL
T.trahens AELGIPLVYALSRNRLGRAMGRKLKISVAAILFYDGVNTEFNRMV
cons * .: :.:. :. : :: .: * :::
H.sapiens ELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQGPSCPAEDG
C.muris HTAKVLQRLYNFCI-------------------------------
C.owczarzaki LQSTEGRLAYFAMLEATHAQWVETP--------------------
C.parvum HTAQLLRKLYHFCI-------------------------------
N.gurberi Q--------------------------------------------
P.tricornutum AISTK----------------------------------------
T.trahens ELADEGRAAFD--A-------------------------------
cons
H.sapiens PPALKEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQMMNLN
C.muris --------------------------------------------E
C.owczarzaki ------------------------------------------PPT
C.parvum --------------------------------------------E
N.gurberi ---------------------------------------------
P.tricornutum ---------------------------------------------
T.trahens --------------------------------------------A
cons
H.sapiens L
C.muris H
C.owczarzaki A
C.parvum N
N.gurberi I
P.tricornutum A
T.trahens L
cons