T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=89
*
 BAD AVG GOOD
*
H.sapiens       :  86
C.muris         :  93
C.owczarzaki    :  89
C.parvum        :  93
N.gurberi       :  85
P.tricornutum   :  89
T.trahens       :  92
cons            :  89

H.sapiens       MASEGPREPESEGIKLSADV------------------KPFVPRF
C.muris         ---------------------------------------------
C.owczarzaki    EA-------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       NL--------------GAALKLAKSTNTMTDDESSTKKA------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       AGLNVAWLESSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFG
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       ASTFPPQYLSSEITLHP----------------YAYSPYTLDSTQ
C.muris         ---------------------------------------------
C.owczarzaki    ----------------P----------------FS----------
C.parvum        ---------------------------------------------
N.gurberi       ----------------PTSTTSASTSQSTESSPK-----------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       NVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKK
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       TYDEKKTYDQQKFDSERADGTISSEIKSARGSHHLSIYAENSLKS
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ----------KKFRKT-----------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       DGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEI
C.muris         ---------------------------------------------
C.owczarzaki    -------------------------------------------EV
C.parvum        ---------------------------------------------
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       QKQPKWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVT
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       ANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLK
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       TIASSADPKNVSIPSSEALSSDPSYN-KEKHIIHPTQKSKA-SQG
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       ----------KSDSSSSSSSSDSDSDAEMKETPKETQKSKKESSS
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       SDLEQNEASRKNKKK-KEKSTSKYEVLTVQEPPRIEDAEEFPNLA
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       SDSSSDEEMKDDEKKPTPKPTETKQVITKKDSSDSSDS-------
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       VASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTA
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       -------------------SSDSSEDEKKPVSKPIQPKPVTKKDS
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       LEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKT
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       SSDSDSSSSSEDEKKPTPKPTETKPVITKKDSSSDSDSSSDSSDD
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       PHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQ
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       EKKPEDEKKPVSKPAVQTKPIAAKKDSSDSSSDSSSEDEKKPTPK
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       ENAVSPAFTS-DDTQDGESGGDDQFPEQAELSGPEGMDELISTPS
C.muris         ---------------------------------------------
C.owczarzaki    ---------------------------------------------
C.parvum        ---------------------------------------------
N.gurberi       PTETKPVITKKDSSSDSDSSSDSSDDEKKPVSKPAVQPKPVTKKD
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       VEDKSEEPPGTELQRDTEA--------SHLAPNHTTFPKIHSRRF
C.muris         ---------------------------------------------
C.owczarzaki    -------------SRVKRCSHCLVRVVFAHSVHSHSLPQS-----
C.parvum        ---------------------------------------------
N.gurberi       SSSDSDSSSSSEDEKKPAG--------SSIAVNKNTVPDSNERKI
P.tricornutum   ---------------------------------------------
T.trahens       ---------------------------------------------

cons                                                         


H.sapiens       RDYCSQMLSKEVDACVTDLLKELVRFQDR-MYQKDPVKAKTKRRL
C.muris         QNYVTQILTASLDRAVSTLLNTLRAIDDR-VRWMSSGVSSKGRVF
C.owczarzaki    HRYCSQKVGAELDSATAIVLKQLHKFQERRLATIDPNKAKQRRWF
C.parvum        QNYVNQILTASLDHSVSILLNTLRAIDDR-VRWMSTVVNSKRRVF
N.gurberi       REYVNYPLDPDYENIIFQMLTKLQFYQFR-LKKTDKKKFKQRLRY
P.tricornutum   RPYATLISDESVKPLLTEMFGELMRLQKR-AVDE--NNTKVKRRL
T.trahens       REYVDQLVPPELNRLIPPMLKELSRLQER-ARVLNPTKA--KRRL

cons            : *       . .     ::  *   : *                


H.sapiens       VLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYA
C.muris         TVGVREAMRCLRHKKLQALIVAPDIEGGDIEGGLRHHVIHILMQA
C.owczarzaki    VVGLKEVFKHLQRGKLRCLIVAPDIESVRSAGGLDDAISSILTEA
C.parvum        TVGVREAMRCLRHKKLKALIVAPDIEGDGVEGSLRHHVIHILLQA
N.gurberi       VIGIREVLKGLKLKHIRAVVIAPNIDKVTTPGGLDTKIEEIIQKC
P.tricornutum   VMGLREVARGIRSHKVKLVAMANNLDD---YGAIDEKLQEILDLA
T.trahens       VTGLREVVKFVKVGTAKAVIVAPDIEKVEADGGLDDKIAFIRTRA

cons            . *::*. : ::    : : :: : :     *.:   :  *   .


H.sapiens       CEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMV
C.muris         QEFNIPVIFALNRHRIGRAMGKHMRMSVLGLLSTRGVERQFQTVA
C.owczarzaki    HAQDRPVVFALNRRKIARALNIHVPVSAVGIFTFDGLHQEYKSML
C.parvum        QELNIPTIFALNRHRIGRAMGKHMRMSVLGLLSIRGVEKQFQAIS
N.gurberi       NEQELPVFFALTKKKLGTAMKTSTKISLVGLYSMDGAFDEFKKAK
P.tricornutum   DENEVPIFYEFTKRALGKVMGKTVKIAVVGVQNAEGAHQQFKKLL
T.trahens       AELGIPLVYALSRNRLGRAMGRKLKISVAAILFYDGVNTEFNRMV

cons                 * .: :.:. :.  :     ::  .:    *   :::   


H.sapiens       ELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQGPSCPAEDG
C.muris         HTAKVLQRLYNFCI-------------------------------
C.owczarzaki    LQSTEGRLAYFAMLEATHAQWVETP--------------------
C.parvum        HTAQLLRKLYHFCI-------------------------------
N.gurberi       Q--------------------------------------------
P.tricornutum   AISTK----------------------------------------
T.trahens       ELADEGRAAFD--A-------------------------------

cons                                                         


H.sapiens       PPALKEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQMMNLN
C.muris         --------------------------------------------E
C.owczarzaki    ------------------------------------------PPT
C.parvum        --------------------------------------------E
N.gurberi       ---------------------------------------------
P.tricornutum   ---------------------------------------------
T.trahens       --------------------------------------------A

cons                                                         


H.sapiens       L
C.muris         H
C.owczarzaki    A
C.parvum        N
N.gurberi       I
P.tricornutum   A
T.trahens       L

cons