T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:8 sec.
SCORE=84
*
BAD AVG GOOD
*
QUERY_Drosophil : 84
QUERY_M.musculu : 86
B.hominis_SPS2 : 86
B.hominis_SPS1 : 89
C.merolae_SPS2 : 84
C.merolae_SPS1 : 83
C.owczarzaki_SP : 77
C.owczarzaki_SP : 84
H.arabidopsidis : 87
H.arabidopsidis : 87
N.gruberi_SPS2 : 74
N.gruberi_SPS1 : 76
P.pallidum_SPS2 : 84
P.pallidum_SPS1 : 88
P.tricornutum_2 : 59
P.tricornutum_S : 68
P.ultimum_SPS2 : 87
P.ultimum_SPS1 : 87
S.parasitica_SP : 87
S.parasitica_SP : 86
T.trahens_SPS2 : 86
T.trahens : 85
cons : 84
QUERY_Drosophil -----MFQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLE-KYLRG
QUERY_M.musculu MSTRESFNPETYELDKSFRLTRFTELKGTGCKVPQDVLQ-KLLES
B.hominis_SPS2 -----LWDPRDHGLPEDFYLTNYTKFKGUGCKVPQAKLL-EYLKG
B.hominis_SPS1 ---------------------------------------------
C.merolae_SPS2 -----------------FRLTRYSTLKGCGCKVPQSELL-EWMTA
C.merolae_SPS1 -----------------FRLTRYSTLKGCGCKVPQTMKSFSRPGG
C.owczarzaki_SP ------FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLL-KLLEV
C.owczarzaki_SP R---KRFNPETLGLPADWRLTKFTQLKGCGCKVPQKDLL-KLLEV
H.arabidopsidis ------FDPLSLGLEEDFVLTNFSALKGCGCKLPQAKLL-GYLDN
H.arabidopsidis ---------------------------------------------
N.gruberi_SPS2 ----------------NVKLTSTTHGLGCGCKIRAQTLS-SILSK
N.gruberi_SPS1 ---------------------------------------------
P.pallidum_SPS2 ------LEKYSFG--------------------------------
P.pallidum_SPS1 ---------------------------------------------
P.tricornutum_2 ---------------------------------------------
P.tricornutum_S ---------------------------GCGAKVGATIVS-RVLAA
P.ultimum_SPS2 -----IFDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLL-GYLED
P.ultimum_SPS1 -------------------------------------------ED
S.parasitica_SP ------FNPTDHGLREDFRLTDFSALKGUGCKLPQEKLL-SYISG
S.parasitica_SP R---APFNPTDHGLREDFRLTDFSALKGUGCKLPQEKLL-SYISG
T.trahens_SPS2 ------FDPTSLGLPPGFRLTDYAKLKGUGCKVSQEDLH-GLLES
T.trahens -----SFDPTSLGLPPGFRLTDYAKLKG-GCKVSQEDLH-GLLES
cons
QUERY_Drosophil TEIE-NK-----------NND------GYLIGSGMDCAVIPL-KR
QUERY_M.musculu LQENHFQ-----------EDEQFLGAVMPRLGIGMDTCVIPL-RH
B.hominis_SPS2 V-GTSIK-----------ENE----------TPGLDCAVVKT-KF
B.hominis_SPS1 ---------------------------------------------
C.merolae_SPS2 TK-NLLR---------------SP--MNRQQSTEKDAENAPSFGT
C.merolae_SPS1 LMSTSNT-----------ESS-TPGDVSVELGVGMDASVVRL-TH
C.owczarzaki_SP FRANSNN-----------AV-------DGTIGVGLDSCVTET-RH
C.owczarzaki_SP FRANSNN-----------AVAGSEQQIDGTIGVGLDSCVTET-RH
H.arabidopsidis VMPNDVK-----------PNE----------TPGMDSSVVKI-SH
H.arabidopsidis -----VK-----------PNE----------TPGMDSSVVKI-SH
N.gruberi_SPS2 IPKQPFD-----------PNV------LVGTETSDDCGVYKL--T
N.gruberi_SPS1 ----------------------------------DDCGVYKL--T
P.pallidum_SPS2 TT-SANV-----------NIS------GIGDGIGYDCAIVPT-KF
P.pallidum_SPS1 -------------------------------GIGYDCAIVPT-KF
P.tricornutum_2 -----------------------------------DAAVQIL-PN
P.tricornutum_S VYERQIE-----------RAK-LLGLPQPSRIDHDDAAVQIL-PN
P.ultimum_SPS2 I-ANDLK-----------PNE----------TPGMDSSVVKI-SH
P.ultimum_SPS1 I-ANDLK-----------PNE----------TPGMDSSVVKI-SH
S.parasitica_SP I-ANDLK-----------PNE------V-SATPGMDSSVVKI-KH
S.parasitica_SP I-ANDLK-----------PNE------IAAATPGMDSSVVKI-KH
T.trahens_SPS2 T-PLPSPPX-------XIDNE----------AIGLDCSIIPT-AI
T.trahens T-PLPSPPXXXXXXXXXIDNE----------AIGLDCSIIPT-AI
cons
QUERY_Drosophil H--KDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGV-TQ
QUERY_M.musculu ---GGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGV-TE
B.hominis_SPS2 ---PGIYSISTTDFFYPSVDDPYVQGKIAACNVLSDMYAMGV-TE
B.hominis_SPS1 --------ISTTDFFYPSVDDPYVQGKIAACNVLSDMYAMGV-TE
C.merolae_SPS2 ---QPLYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTP
C.merolae_SPS1 ---QPLYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTP
C.owczarzaki_SP ---PGLYLVQTTDFFFPLIEDP-----------------------
C.owczarzaki_SP ---PGLYLVQTTDFFFPLIEDPYQMGRIACANVLSDLYAMGV-SE
H.arabidopsidis G--SGLYLVSTTDFFFPSVEDPYVQGQIACANVLSDVYAMGV-TE
H.arabidopsidis G--SGLYLVSTTDFFFPSVEDPYVQGQIACANVLSDVYAMGV-TE
N.gruberi_SPS2 ---SELALCATVDFFTPIVDSPKDFGAIACANALSDVYAMGV-TS
N.gruberi_SPS1 ---SELALCATVDFFTPIVDSPKDFGAIACANALSDVYAMGG-EC
P.pallidum_SPS2 ---PDIVMVTTTDFFFPNVDDPYLMGKIACANVLSDLYSFGI-DE
P.pallidum_SPS1 ---PDIVMVTTTDFFFPNVDDPYLMGKIACANVLSDLYSFGI-DE
P.tricornutum_2 K--AGGAIVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGA-TP
P.tricornutum_S K--AGGAIVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGA-TP
P.ultimum_SPS2 G--KDLYMISTTDFFFPSVEDPYVQGKIACANVLSDVYAMGV-TE
P.ultimum_SPS1 G--KDLYMISTTDFFFPSVEDPYVQGKIACANVLSDVYAMGV-TE
S.parasitica_SP PKFGDLYMISTTDFFYPLVQDPYVQGRIACANVLSDLYAMGV-TE
S.parasitica_SP PKFGDLYMISTTDFFYPLVQDPYVQGRIACANVLSDLYAMGV-TE
T.trahens_SPS2 ---EGVVTIQTTDYFYPLVEDPYQQGRIACANVLSDLFAMGI-SR
T.trahens ---EGVVTIQTTDYFYPLVEDPYQQGRIACANVLSDLFAMGI-SR
cons * *:: :..*
QUERY_Drosophil FDTVEMIVSTSTSFSE-KERDVVIGLVMKG-FQNSLKANGYRNTP
QUERY_M.musculu CDNMLMLLGVSNKMTD-RERDKVIPLIIQG-FKDAAEEAG---TS
B.hominis_SPS2 VDTMLMILGVSVDMEP-DAMDYVTKELIRG-FNDQARVAV---TN
B.hominis_SPS1 VDTMLMILGVSVDMEP-DAMDYVTKELIRG-FNDQARVAV---TN
C.merolae_SPS2 PSTMLMLVCAATEIEPPALRAGVTQTMMAG-FIDACHEAG---TQ
C.merolae_SPS1 PSTMLMLVCAATEIEPPALRAGVTQTMMAG-FIDACHEAG---TQ
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP CDNMLMLLGVSTTLTP-EESVIVTPLVMKG-FHDLCQEAG---TN
H.arabidopsidis VDTMLMILGVCRDMTE-KQRDVVTTEMIRG-FNDLARQAQ---TN
H.arabidopsidis VDTMLMILGVCRDMTE-KQRDVVTTEMIRG-FNDLARQAQ---TN
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 -KVALNIVAFPVK--R-LSL-DILQLILQG-AQEKASEAG---VT
P.pallidum_SPS2 CDNMLMLLAASTDMTP-ENRNWSTRGLIQG-FNDHCNLAG---TK
P.pallidum_SPS1 CDNMLMLLAASTDMTP-ENRNWSTRGLIQG-FNDHCNLAG---TK
P.tricornutum_2 QTAMTLAVA--PFAADEEVTESTLLHLLSGCFQCLARTN------
P.tricornutum_S QTAMTLAVA--PFAADEEVTESTLLHLLSG-VSDILQDEN---VQ
P.ultimum_SPS2 VDTMLMILGVCRDMSE-KERDVVTTQMIRG-FNDLARKAE---TN
P.ultimum_SPS1 VDTMLMILGVCRDMSE-KERDVVTTQMIRG-FNDLARKAE---TN
S.parasitica_SP VDTMLMILGVSRTMTD-LERDVVTTQLIHG-FNDLAREAG---TN
S.parasitica_SP VDTMLMILGVSRTMTD-LERDVVTTQLIHG-FNDLAREAG---TN
T.trahens_SPS2 CDTMLMILAASLEMPK-DQRMIVTRELIRG-FNDLATEAG---TS
T.trahens CDTMLMILAASLEMPK-DQRMIVTRELIRG-FNDLATEAG---TS
cons
QUERY_Drosophil LIIRQLKINPWCIIGGIATSVCRS-EEIILPSNAQPGDVLVLTKP
QUERY_M.musculu VTGGQTVLNPWIVLGGVATTVCQP-NEFIMPDNAVPGDVLVLTKP
B.hominis_SPS2 VTGGQTVRNPWPMIGGVASSTCREGEDFIRPVHGEPGDVIVLTKP
B.hominis_SPS1 VTGGQTVRNPWPMIGGVASSTCREGEDFIRPVHGEPGDVIVLTKP
C.merolae_SPS2 VTGGQTTLNPWPLIGGVAEVVLPR-GEFLMPDAAQPGDTIVLTKP
C.merolae_SPS1 VTGGQTTLNPWPLIGGVAEVVLPR-GEFLMPDAAQPGDTIVLTKP
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP VLGGQTVKNPWFLLGGVATSVVGR-HEMIMPDGAKSGDVLVLTKP
H.arabidopsidis VTGGQTVMNPWPIVGGVAMSVRSE-MQIIRPENAVVGDVIILTKP
H.arabidopsidis VTGGQTVMNPWPIVGGVAMSVRSE-MQIIRPENAVVGDVIILTKP
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 IIGGHSIEDNEPKFGMCVSGLVHP-ERIWKNVGCRNGDVLLLTKP
P.pallidum_SPS2 VRGGQTVKNPWPLIGGVATAIIRK-DEMIMPVNAVPGDVLVLTKP
P.pallidum_SPS1 VRGGQTVKNPWPLIGGVATAIIRK-DEMIMPVNAVPGDVLVLTKP
P.tricornutum_2 -------------------A-------------------------
P.tricornutum_S LVGGHTCEGLELACGLSVQGYTDNPKLLLRKQGGAIGDKIVLTKP
P.ultimum_SPS2 VTGGQTVMNPWPIVGGVAMSVRSE-SEIIRPVNAQVGDVIILTKA
P.ultimum_SPS1 VTGGQTVMNPWPIVGGVAMSVRSE-SEIIRPVNAQVGDVIILTKA
S.parasitica_SP VTGGQTVMNPWPIVGGVAMSVRAE-SEIIRPENATAGQMLVLTKP
S.parasitica_SP VTGGQTVMNPWPIVGGVAMSVRAE-SEIIRPENATAGQMLVLTKP
T.trahens_SPS2 VTGGQTVLNPWPIIGGVASAVVPSDGGYIDPFSLVPGDVMVLTKP
T.trahens VTGGQTVLNPWPIIGGVASAVVPSDGGYIDPFSLVPGDVMVLTKP
cons
QUERY_Drosophil LGGQMAMDAHLWQL-----NQT-EKYKKLLSECSDADIKETFEIA
QUERY_M.musculu LGTQVAVAVHQWL------DIP-EKWNKIKLVVTQEDVELVYQEA
B.hominis_SPS2 LGTQLAVNMFEWLR------TA-AKFNRVRAVLSVEDVVASYKMA
B.hominis_SPS1 LGTQLAVNMFEWLR------TA-AKFNRVRAVLSVEDVVASYKMA
C.merolae_SPS2 LGTQVAINLYQWGR------QARVHYSKIEQVLTPADICRAYDVA
C.merolae_SPS1 LGTQVAINLYQWLG------QM-EDAQKIEQVLTPADICRAYDVA
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP LGNQLAVNAHQWML-----TDP-ERYKRLDGVLTNEQVIEAYEHA
H.arabidopsidis LGTQVAVNVFQWKK------KP-EQWQRVNQVVTPHDADVAFQMA
H.arabidopsidis LGTQVAVNVFQWKK------KP-EQWQRVNQVVTPHDADVAFQMA
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 IGTGVLTTAMKKGL-----IG-------------PNDD--CSKKC
P.pallidum_SPS2 LGTQVCANFHQWIR------QP-EKWAKIADIATVEEAVETFTYA
P.pallidum_SPS1 LGTQVCANFHQWIR------QP-EKWAKIADIATVEEAVETFTYA
P.tricornutum_2 -Y-------------------------------------------
P.tricornutum_S IG-------------------------------------------
P.ultimum_SPS2 LGTQVAVNLFQWRK------RP-ERWQRVADVVTVQDAEHGFAMA
P.ultimum_SPS1 LGTQVAVNLFQWRK------RP-ERWQRVADVVTVQDAEHGFAMA
S.parasitica_SP LGTQLAVNAYQMKD------QP-ARWSKVESFLTREMADRAFSVA
S.parasitica_SP LGTQLAVNAYQMKD------QP-ARWSKVESFLTREMADRAFSVA
T.trahens_SPS2 IGTQVAVNAYQWLGDHEAGKEG-SNWDLIADVLSPAQARVAFALA
T.trahens IGTQVAVNAYQWLGDHEAGKEG-SNWDLIADVLSPAQARVAFALA
cons
QUERY_Drosophil VKSMTYLNKNAALLMH----------KYQ-AHCATDITGFGLLGH
QUERY_M.musculu MMNMARLNRTAAGLMH----------TFN-AHAATDITGFGILGH
B.hominis_SPS2 MESMSTLNLEGARLMW----------KHH-AHGCTDVTGFGVTGH
B.hominis_SPS1 MESMSTLNLEGARLMW----------KHH-AHGCTDVTGFGVTGH
C.merolae_SPS2 CLSMAHLNARAAQLLL----------ESGAAHAVTDITGFGILGH
C.merolae_SPS1 CLSMAHLNARAAQLLL----------ESGAAHAVTDITGFGILGH
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP ITNMTRLSRVAARLMR----------EFG-AHAATDVTGFGILGH
H.arabidopsidis SESMGRLNLNAAKMMH----------KHG-AHSATDVTGFGLLAH
H.arabidopsidis SESMGRLNLNAAKMMH----------KHG-AHSATDVTGFGLLAH
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 IEWMSTLNKSASEILRGLHRVNSSSTPYE-IHACTDITGFGLMGH
P.pallidum_SPS2 TQSMARLNRIGARLMR----------KYG-AHAATDVTGFGIAGH
P.pallidum_SPS1 TQSMARLNRIGARLMR----------KYG-AHAATDVTGFGIAGH
P.tricornutum_2 ---------------------------------------------
P.tricornutum_S ---------------------------------------------
P.ultimum_SPS2 SESMSRLNLNAARLMH----------KYG-AHSATDVTGFGILAH
P.ultimum_SPS1 SESMSRLNLNAARLMH----------KYG-AHSATDVTGFGILAH
S.parasitica_SP SESMSRLNVNGAKLMH----------KHG-VTSATDVTGFGILGH
S.parasitica_SP SESMSRLNVNGAKLMH----------KHG-VTSATDVTGFGILGH
T.trahens_SPS2 SASMARLNKSGAALMV----------KHG-AHGATDVTGFGLLGH
T.trahens SASMARLNKSGAALMV----------KHG-AHGATDVTGFGLLGH
cons
QUERY_Drosophil ANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVG--QSTKFRSGRS
QUERY_M.musculu AQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACG--NMFGLMHGTC
B.hominis_SPS2 ATNLAAEQEKAVDLVVDTLPIIKNMARVESHLN--NNWNLFKGRS
B.hominis_SPS1 ATNLAAEQEKAVDLVVDTLPIIKNMARVESHLN--NNWNLFKGRS
C.merolae_SPS2 AQNLARNQKAPVDMEIDVLPIIRGMTSADRALQGGKMFRLLEGFS
C.merolae_SPS1 AQNLARNQKAPVDMEIDVLPIIRGMTSADRALQGGKMFRLLEGFS
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP ARNLARSQKDSVNFEIDVFPVLRHMIAMERA-T--PVFHLLEGTS
H.arabidopsidis ARNQAKSQLEDVSFELHTLPIIKNMVKVNEVIG--NSFKLLDGFA
H.arabidopsidis ARNQAKSQLEDVSFELHTLPIIKNMVKVNEVIG--NSFKLLDGFA
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 ANLVSKLSRSS-SHLVHN---------------------------
P.pallidum_SPS2 SDNLAKSQLQPVVFEIHTLPIIEHMKKIDVHLN--NNWNLCRGLS
P.pallidum_SPS1 SDNLAKSQLQPVVFEIHTLPIIEHMKKIDVHLN--NNWNLCRGLS
P.tricornutum_2 ---------------------------------------------
P.tricornutum_S ---------------------------------------------
P.ultimum_SPS2 ARNQAKSQTRDVNFEIHTLPIIQHMVKVNETIG--NSFRLLEGFA
P.ultimum_SPS1 ARNQAKSQTRDVNFEIHTLPIIQHMVKVNETIG--NSFRLLEGFA
S.parasitica_SP AQNMATSQKADVDFELHTLPVIKDMLAVNEAFN--GQWRLELGFS
S.parasitica_SP AQNMATSQKADVDFELHTLPVIKDMLAVNEAFN--GQWRLELGFS
T.trahens_SPS2 ARNLAEHQKAAVHISIHTLPVIENMPAVNDKF----NFKLLDGWS
T.trahens ARNLAEHQKAAVHISIHTLPVIENMPAVNDKF----NFKLLDGWS
cons
QUERY_Drosophil VETSGGLLICLPADA-AD--------KFCRDFEEATNG-EQK--S
QUERY_M.musculu PETSGGLLICLPREQ-AA--------RFCAEIKSPKYGEGHQ--A
B.hominis_SPS2 AETSGGLMIMMRPED-AE--------AYIKEYKEI---TGHEQRP
B.hominis_SPS1 AETSGGLMIMMRPED-AE--------AYIKEYKEI---TGHD--A
C.merolae_SPS2 AETSGGLLICFGASS-TE---------------------------
C.merolae_SPS1 AETSGGLLICFGASS-TERSSQVVARQFCEKLATV--DDHWP--A
C.owczarzaki_SP ---------------------------------------------
C.owczarzaki_SP AETSGGLLIALGPSP-DG--------KLDARA-------------
H.arabidopsidis AETSGGLLLCLPAEN-AE--------AFIKELR------------
H.arabidopsidis AETSGGLLLCLPAEN-AE--------AFIKELREL---DEKP--A
N.gruberi_SPS2 ---------------------------------------------
N.gruberi_SPS1 ---------------------------------------------
P.pallidum_SPS2 AETSGGLLIAMPEDK-AR--------EFVKEIEEK---TSSE--A
P.pallidum_SPS1 AETSGGLLIAMPEDK-AR--------EFVKEI-------------
P.tricornutum_2 ---------------------------------------------
P.tricornutum_S ---------------------------------------------
P.ultimum_SPS2 AETSGGLLLCLPAEH-AD--------A------------------
P.ultimum_SPS1 AETSGGLLLCLPAEH-AD--------AYIAELRAL---DGKP--A
S.parasitica_SP SETSGGLLVSIDADR------------------------------
S.parasitica_SP SETSGGLLVSIDADR-AQW------LAFIDDLVAL---DMQP--A
T.trahens_SPS2 SETSGGLLVALPSADAAA--------AFCADI-------------
T.trahens SETSGGLLVALPSADAAA--------AFCADIEAE---DGWP--A
cons
QUERY_Drosophil FQIGHVTAANESDAVLCEDVEFIE---------------VSL
QUERY_M.musculu WIIGIVEKGNR-TARIIDKPRIIEVAPQVATQNVNPTPGATS
B.hominis_SPS2 SAIGHFAEKTD-DV------------------------IVVC
B.hominis_SPS1 WIIGKVVEGQR-KGYVVENPTLIEPAK------LASTSGTSP
C.merolae_SPS2 -----------------------------------------R
C.merolae_SPS1 WIVGRVVPGSR-EARILDHVKIL-----------------EV
C.owczarzaki_SP ------------------------------------------
C.owczarzaki_SP --------------------N-----------------AQRY
H.arabidopsidis -----------------------------------------E
H.arabidopsidis WIVGRVIAGLK-DACIVPNPTIVEV--------------SPE
N.gruberi_SPS2 -----------------------------------------F
N.gruberi_SPS1 -----------------------------------------L
P.pallidum_SPS2 FSFSSSSEL--------------------------SSSRSSS
P.pallidum_SPS1 -----------------------------------------E
P.tricornutum_2 -----------------------------------------R
P.tricornutum_S -----------------------------------------T
P.ultimum_SPS2 -----------------------------------------Y
P.ultimum_SPS1 WVVGRVVAGSK-DARIVANPTIL-----------------EV
S.parasitica_SP -----------------------------------------A
S.parasitica_SP WIVGRVVQGTK-QARLAPDVTFV-----------------EI
T.trahens_SPS2 -----------------------------------------E
T.trahens WIVGSVSAGSG-SADIVE----------------------NP
cons