TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= EhSep2_emiliania_huxley; gi|182639182|sp|Q50KB1.2|SEP2_EMIHU
RecName: Full=Protein disulfide-isomerase-like protein EhSep2; Flags:
Precursor # QUERY
         (223 letters)

Database: T.trahens/genome.fa 
           131 sequences; 28,680,627 total letters

Searching.................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL349442.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    92   3e-19
gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    88   5e-18
gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    86   2e-17
gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    79   3e-15
gb|GL349456.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    76   2e-14
gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    72   4e-13
gb|GL349509.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    70   8e-13
gb|GL349467.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    57   1e-08
gb|GL349441.1| Thecamonas trahens ATCC 50062 unplaced genomic sc...    55   4e-08

>gb|GL349442.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.10,
              whole genome shotgun sequence
          Length = 578410

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
 Frame = -3

Query: 20     IELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTT 79
              +EL  DNFD++VL       ++F APW GHCK + P+W+ +A  F +    ++A +D   
Sbjct: 386318 VELNQDNFDDVVLNEDAFVLVEFFAPWCGHCKALAPEWEKVAKAFANEPNCVVAALDADK 386139

Query: 80     GGKPLCEKYGVRGYPTIKYFNPPDEEGED-YKGGRSLDELKKFAENELGPGCSVDLMDNC 138
                + +  KY V G+PTIK F   D+ GE+ Y GGR+ D++ ++   + G   +    D  
Sbjct: 386138 -HREIGSKYDVSGFPTIKAFAKDDKSGEEKYTGGRTADDIVEYLNTQCG---TFRTTDGS 385971

Query: 139    SEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLKELQATYKESMDKLEKLKE 198
                   G++ E  ++A +   E  +  +  L DA        K L  +Y  +  K  K   
Sbjct: 385970 LTSAAGRVAELDELAAQ-FLEADDATRASLIDA-------AKALFESYDGAFPKAAKFYS 385815

Query: 199    ESAPKI 204
              ++  KI
Sbjct: 385814 QAMTKI 385797



 Score = 80.5 bits (197), Expect = 8e-16
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
 Frame = -3

Query: 35     GKAAFIKFLAPWXGHCKKMKPDWDSLASTF-EDSKKVLIADVDCTTGGKPLCEKYGVRGY 93
              G+    +F APW GHCK + P+W+ L  TF   S +V+IA VD     + L  ++GV G+
Sbjct: 386633 GRWCTTEFFAPWCGHCKNLAPEWEKLGETFARHSSEVVIAAVD-ADAHRELGSRFGVSGF 386457

Query: 94     PTIKYFNPPDEEGEDYKGGRSLDELKKFAENELG 127
              PT+K+F     E EDY GGR+ ++L  F  ++ G
Sbjct: 386456 PTLKFFPKGSTEPEDYSGGRTAEDLVAFVNSKTG 386355


>gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.6,
              whole genome shotgun sequence
          Length = 631277

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
 Frame = -1

Query: 1      MALRSLTLLCAAA----GASAGAIELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPD 56
              + L +LTLL  A+     +S   + +TP NFD +V  +     ++F APW GHCK + P+
Sbjct: 592784 VVLLTLTLLIPASYGLYSSSDDVVVVTPSNFDAVVTNADGPVLLEFFAPWCGHCKSLTPE 592605

Query: 57     WDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRS-- 114
              W   AS  +    V   D D     + L  ++G++G+PTIK F+    + EDY GGR+  
Sbjct: 592604 WKKAASALKGVVTVAALDAD---AHRDLAGRFGIQGFPTIKIFSTATSQPEDYNGGRTAD 592434

Query: 115    ------LDELKKFAENELGPGCS 131
                    LD  KK   + L  G S
Sbjct: 592433 AIVAAGLDAAKKLVRSRLRGGSS 592365



 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -1

Query: 14     GASAGAIELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIA 73
              G +   + L   NFDELV+ SG+   ++F APW GHCK ++P+W   A+  +   KV + 
Sbjct: 592334 GKADAVVHLDESNFDELVIDSGEVWMVEFFAPWCGHCKALEPEWKKAAAALDG--KVKLG 592161

Query: 74     DVDCTTGGKPLCEKYGVRGYPTIKYFNPPDE-EGEDYKGGRSLDELKKFA 122
               VD T   + L  +Y V+GYPTI  F   D+ E   Y+G RS   ++ +A
Sbjct: 592160 AVDATVYTQ-LAARYNVQGYPTIVVFGSSDDGEPVPYQGQRSASAIESYA 592014


>gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.4,
              whole genome shotgun sequence
          Length = 664084

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
 Frame = -2

Query: 11     AAAGASAGAIE-LTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKK 69
              AAA    G ++ LT   FD +V   GKA F++F APW GHCK + P +  L +TF   K 
Sbjct: 293307 AAAAVDDGDVKVLTDATFDAVVNDPGKAVFVEFYAPWCGHCKNLAPTYAKLGTTFAGVKD 293128

Query: 70     VLIADVDCTTGGKPLCEKYGVRGYPTIKYFNP-PDEEGEDYKGGRSLDELKKFAENELG 127
              V+IA +D T        K GV GYPT+ ++      +GE Y GGRS + L +F   + G
Sbjct: 293127 VVIAKLDATV-HSGAARKAGVSGYPTMMFYGKGAGSDGEKYAGGRSGEALTEFINKKTG 292954


>gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.55,
              whole genome shotgun sequence
          Length = 273410

 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 43/98 (43%), Positives = 56/98 (57%)
 Frame = +1

Query: 44     APWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPD 103
              APW GHCK + P W   AS       +    VDCT     +C +YGVRGYPT+KYF   D
Sbjct: 111667 APWCGHCKAIAPVWKETASHLLGVTSM--GKVDCTVHSS-ICSRYGVRGYPTLKYFK--D 111831

Query: 104    EEGEDYKGGRSLDELKKFAENELGPGCSVDLMDNCSEE 141
                  DY+GGRS++ L  +AE   GP  ++ L D+ SE+
Sbjct: 111832 GVPRDYRGGRSVEALVAYAERMAGPPVAI-LDDDASEK 111942


>gb|GL349456.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.24,
              whole genome shotgun sequence
          Length = 453307

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
 Frame = +3

Query: 25     DNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPL 84
              D+F+++VL   K   ++F APW GHCK + P ++ L   F     V+IA +D T    P+
Sbjct: 245445 DSFEDIVLAEDKDVLVEFYAPWCGHCKSLAPTYEKLGEAFASVDSVVIAKMDATANDIPV 245624

Query: 85     CEKYGVRGYPTIKYFNPPDEEGED----YKGGRSLDELKKFAENELGPGCSVDLMD 136
                   VRG+PT+ +F P    G D    Y+G R  D+LK+F           D +D
Sbjct: 245625 -NGIDVRGFPTLIFF-PAGNGGVDAQIKYEGAREFDDLKEFVLASAASDVDADAVD 245786



 Score = 67.8 bits (164), Expect = 5e-12
 Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +3

Query: 6      LTLLCAAAGASAG-AIELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTF 64
              +TL  A A A+A   I+LT  NF E  +       ++F APW GHCK++ P+++  A   
Sbjct: 244407 VTLAAALALATASNVIDLTEANF-EATMAEKPLMMVEFFAPWCGHCKRLAPEYEQAADAL 244583

Query: 65     EDSKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAEN 124
              E      +A VD T     L  ++GVRGYPT+  F   +E G+ Y+G R    +  +   
Sbjct: 244584 E-GVDAWLAKVDATEEA-DLANRFGVRGYPTLIVFRNGEEAGK-YEGAREAKAIADYMVR 244754

Query: 125    ELGPGCSVDLMDNCSE 140
              +  P  +    D  +E
Sbjct: 244755 QTLPAVTELTADGVAE 244802


>gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.1,
              whole genome shotgun sequence
          Length = 716227

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 41/107 (38%), Positives = 57/107 (53%)
 Frame = +3

Query: 22     LTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGG 81
              LTP+ FD+  L       + F APW GHCK MK  + + A+T +      +A VDCT   
Sbjct: 367749 LTPETFDDH-LDGSDGTLVMFYAPWCGHCKTMKEPYKAAAATVKAEGLGSLAAVDCTI-D 367922

Query: 82     KPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGP 128
              + LC K+ V+GYPT+ YF   DE+   + G RS + L  F  +   P
Sbjct: 367923 RALCGKHDVKGYPTVVYFGADDEQ-ITFAGVRSEEGLVAFMRDPQPP 368060



 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 40/107 (37%), Positives = 56/107 (52%)
 Frame = +3

Query: 22     LTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGG 81
              LTP+ FD+  L       + F APW GHCK MK  + + A+T +      +A VDCT   
Sbjct: 368127 LTPETFDDH-LDGSDGTLVMFYAPWCGHCKAMKEPYKAAAATVKAEGLGSLAAVDCTI-D 368300

Query: 82     KPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGP 128
              + LC K+ V+GYPT+ YF   D E   + G R+ + L  F  +   P
Sbjct: 368301 RALCGKHDVKGYPTVVYF--ADGEQMAFSGPRTEEGLVAFMRDPQPP 368435



 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 38/107 (35%), Positives = 56/107 (52%)
 Frame = +3

Query: 22     LTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGG 81
              L+P+ FD+  L       + F APW GHCK MK  + + A+T +      +A VDCT   
Sbjct: 367371 LSPETFDDH-LDGFDGTLVMFFAPWCGHCKAMKEPYKAAAATVKAEGLGSLAAVDCTVDN 367547

Query: 82     KPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGP 128
                LC ++ ++GYPT+ YF   DE+   + G RS + L  F  +   P
Sbjct: 367548 S-LCNEFNIKGYPTLIYFGDDDEQ-ITFAGVRSEEGLVAFMRDPQPP 367682



 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 35/109 (32%), Positives = 49/109 (44%)
 Frame = +3

Query: 20     IELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTT 79
              I L  D F   V        + F APW GHCK MK  + + A+T +      +A VDCT 
Sbjct: 368496 IMLRSDTFAPFVDSESAGTLVMFYAPWCGHCKAMKEPYKAAAATVKAEGLGSLAAVDCTI 368675

Query: 80     GGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGP 128
               G  LC ++    YPT+ +F       + Y+  R+ D L +F      P
Sbjct: 368676 DG-DLCARHSANAYPTLLHFTDASSSIK-YEASRTEDALLEFMREHSSP 368816


>gb|GL349509.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.77,
             whole genome shotgun sequence
          Length = 51248

 Score = 70.5 bits (171), Expect = 8e-13
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
 Frame = -2

Query: 20    IELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTT 79
             I+LT  NF E VL S +   ++F+APW GHCK + P+W   A   +   +  + D    T
Sbjct: 27244 IKLTAKNFREKVLDSSETWMVEFMAPWCGHCKALTPEWARAAGKLKGVVRFGVVDATVET 27065

Query: 80    GGKPLCEKYGVRGYPTIK-----YFNPPDEEG---------EDYKGGRSLDELKKFAENE 125
                 L  KYG++GYPTIK      F    + G         EDY+  R    L  FA ++
Sbjct: 27064 A---LASKYGIKGYPTIKAYTGNAFTKRSKSGKTSKLRRNVEDYQYERKAKALVSFARSK 26894

Query: 126   L 126
             L
Sbjct: 26893 L 26891


>gb|GL349467.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.35,
             whole genome shotgun sequence
          Length = 361230

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
 Frame = +2

Query: 5     SLTLLCAAAGASA---GAIELTPDNFDELVLKSGKAAFI--KFLAPWXGHCKKMKPDWDS 59
             +L LL AA G +A     + +T +   E +  S     I  +F APW GHCK++ P ++ 
Sbjct: 62834 ALALLAAAVGTAAKESNVVTITSEEQLESLTSSTADGVIVLEFYAPWCGHCKQLAPIYEE 63013

Query: 60    LASTFED------SKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGED----Y 109
             +A  F D      S  +++  +D T     L  +Y V+GYPTI      +E        Y
Sbjct: 63014 MADEFADASELEPSASIVLTKIDATQ-LPGLASEYNVKGYPTIIILRVREESSAPTRSVY 63190

Query: 110   KGGRSLDEL 118
             KG R   EL
Sbjct: 63191 KGDRGAVEL 63217


>gb|GL349441.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.9,
              whole genome shotgun sequence
          Length = 584593

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 34/113 (30%), Positives = 56/113 (49%)
 Frame = -3

Query: 11     AAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAPWXGHCKKMKPDWDSLASTFEDSKKV 70
              + +G+  G I    D     +L       ++F APW  +CK+++P   +LA   +D+ ++
Sbjct: 129494 SGSGSGNGQIVHMSDADAGELLSDKSLTLVEFYAPWCHYCKELEPVLVALAK--QDAPEL 129321

Query: 71     LIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAE 123
               +A +DCT      C  +GVRGYPT+     P      Y G RSL  L  +++
Sbjct: 129320 RVAKIDCTRSA-TTCRAFGVRGYPTLFLVRGP--RIIPYGGARSLSALHAWSQ 129171


  Database: T.trahens/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,680,627
  Number of sequences in database:  131
  
Lambda     K      H
   0.311    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,863,980
Number of Sequences: 131
Number of extensions: 146947
Number of successful extensions: 571
Number of sequences better than 1.0e-05: 9
Number of HSP's better than  0.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 450
Number of HSP's gapped (non-prelim): 221
length of query: 223
length of database: 9,560,209
effective HSP length: 96
effective length of query: 127
effective length of database: 9,547,633
effective search space: 1212549391
effective search space used: 1212549391
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 110 (47.0 bits)