TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= EhSep2_emiliania_huxley; gi|182639182|sp|Q50KB1.2|SEP2_EMIHU
RecName: Full=Protein disulfide-isomerase-like protein EhSep2; Flags:
Precursor # QUERY
         (223 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                    86   1e-17
supercontig_1.17 of Capsaspora owczarzaki ATCC 30864                   81   6e-16
supercontig_1.6 of Capsaspora owczarzaki ATCC 30864                    61   6e-10

>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score = 86.3 bits (212), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = -2

Query: 12     AAGASAGAIELTPDNFDELVLKSGKAAFIKFLAPWUGHCKKMKPDWDSLASTFEDSKKV- 70
              +AG     +ELT  NF ELVL S     ++F APW GHCK + P W++ A   +   KV 
Sbjct: 341690 SAGGKQAVVELTDANFAELVLNSQDVWLVEFFAPWCGHCKNLAPIWEAAAKKLDGKVKVG 341511

Query: 71     -LIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENEL 126
               L A V  +T G     +Y ++GYPTIK F        DY+GGRS +++ + A   L
Sbjct: 341510 ALDATVHSSTAG-----RYNIKGYPTIKVFGADKANPSDYQGGRSENDIVQAALERL 341355



 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +2

Query: 22      LTPDNFDELVLKSGKAAFIKFLAPWUGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGG 81
               L   NFD+ V  + K   I+F APW GHCK ++P ++ LA   +  + ++IA +D T+  
Sbjct: 3137768 LVGSNFDDEVFGNDKDMLIEFYAPWCGHCKSLEPVFNELAQKVKGEENLIIAKLDATSND 3137947

Query: 82      KPLCEKYGVRGYPTIKYFNPPDEE--GEDYKGGRSLDELKKFAENE 125
                   + + V GYPT+ Y+ P + +   + Y+GGR +     + + E
Sbjct: 3137948 FAR-DLFPVSGYPTL-YWVPGNNKHSPKKYEGGRDVKSFIDYIKKE 3138079



 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +2

Query: 48      GHCKKMKPDWDSLASTF-EDSKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEG 106
               GHCK+++P++D  A+   +D   + IA VD T     L   +GV GYPTIK F      G
Sbjct: 3136805 GHCKRLEPEYDKAAAILAKDDPPIYIAKVDATEEPS-LASDFGVSGYPTIKLFRKGAVSG 3136981

Query: 107     EDYKGGRSLDELKKFAENELGP 128
                DY  GR  + +  +   + GP
Sbjct: 3136982 -DYDSGRDANSIVAYMRKQSGP 3137044


>supercontig_1.17 of Capsaspora owczarzaki ATCC 30864
          Length = 792894

 Score = 80.9 bits (198), Expect = 6e-16
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = -2

Query: 15     ASAGAIELTPDNFDELVLKSGKAAFIKFLAPWUGHCKKMKPDWDSLASTFEDSKKVLIAD 74
              +  G   LT  + DELV    K  F+++ APW GHCKK+ P WD LA+ F++   V+IA 
Sbjct: 182228 SGTGVRVLTGRDHDELVHDETKNVFVEYYAPWCGHCKKLVPIWDKLAAAFDNVDNVVIAK 182049

Query: 75     VDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGE---DYKGGRSLDELKKF 121
              +D T           V+G+PT+K++  P   G    DY GGR  DEL K+
Sbjct: 182048 MDSTANE---VASVHVQGFPTLKFY--PAGAGRRVVDYSGGREYDELHKY 181914



 Score = 57.0 bits (136), Expect = 9e-09
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -2

Query: 44     APWUGHCKKMKPDWDSLASTFEDS-KKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPP 102
              APW GHCK + P +   A+  + +   V +A +D T        K+ VRGYPT+K+F   
Sbjct: 183170 APWCGHCKSLVPHYAEAATRLKSAGSPVALAKLDATVHSAS-ASKFEVRGYPTLKFFK-- 183000

Query: 103    DEEGEDYKGGRSLDELKKFAENELGP 128
              +    DY GGR+ +++  + + + GP
Sbjct: 182999 NGNPMDYTGGRTANDIFNWVQKKTGP 182922


>supercontig_1.6 of Capsaspora owczarzaki ATCC 30864
          Length = 1617845

 Score = 60.8 bits (146), Expect = 6e-10
 Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 64/265 (24%)
 Frame = +2

Query: 1      MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAPWUGHCKKMKPDW--- 57
              MAL +  ++   A A +  +ELT  NFDEL  +      I F APW GHCK + P W   
Sbjct: 583817 MALVAAPMMMQLAAAHS-PVELTEANFDELTSEGDW--IISFTAPWCGHCKSLAPVWIQA 583987

Query: 58     ---------------------------------DSLASTFEDSKK----------VLIAD 74
                                                 L +T   S K          + +  
Sbjct: 583988 AAQLPSHMAGVAAAAAANAKSQESVAKPAFSCDSELWTTTPSSNKPANAAAGGQMMRLGK 584167

Query: 75     VDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGP------ 128
              VDCT     L E++G+RGYPTIK+F+   +   D++  R++D + +FAE    P      
Sbjct: 584168 VDCTAQA-ALGERFGIRGYPTIKHFS-AGQYVSDFRAARTVDGILEFAERVSLPSIAQVL 584341

Query: 129    -GCSVDLMDNCSE-----------EQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHE 176
               G ++ ++ N +E           EQ+   + ++  A   +T++   +    A AE  + 
Sbjct: 584342 NGAAITVLANGAEAVFVLVDHNPCEQEDVERVFLHTAKTLQTQVAFAVATRAAFAE--YA 584515

Query: 177    ALLKELQATYKESMDKLEKLKEESA 201
              A L +     K     L  LK+  A
Sbjct: 584516 ATLSQADLASKFPGSFLAVLKDGKA 584590


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.311    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,368,084
Number of Sequences: 89
Number of extensions: 108021
Number of successful extensions: 419
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 292
Number of HSP's gapped (non-prelim): 266
length of query: 223
length of database: 9,347,932
effective HSP length: 95
effective length of query: 128
effective length of database: 9,339,477
effective search space: 1195453056
effective search space used: 1195453056
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 110 (47.0 bits)