genewise output
Score 267.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000033_1.0   49 WRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPL-GRGLVGGQEEA 
                     +RLT +S +KG GCKVPQ  LL+ +   T+  +R P+      GG     
                     FRLTRYSTLKGCGCKVPQSELLEWMTA-TKNLLRSPMKSFSRPGGLMST 
gi|151559141|d-20944 tccacttacagtgtagccagtcgtaag aaactctcaaattacggtaaa 
                     tgtcgacctaggggatcagattagtcc caattgcctagtcgcggttgc 
                     cctggttatgcttcgttatggcgggca cgccgtaaggctcatccggta 


SPP00000033_1.0   97 SQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGG--------------- 
                     S          P      LG+GMD+ V+ L                    
                     SNTES----STPGDVSVELGVGMDASVVRLTQLSSRQQSTEKDAENAPS 
gi|151559141|d-20800 aaagt    aacgggtggcgggaggtggctacctaaccaagagggagct 
                     gacac    gccgatctatgtgtaccttgtcatcggaagcaaacaaccc 
                     ccagg    cgaacccgacgtcgcccgacgcgcccaagcggaccgtgcc 


SPP00000033_1.0  131 -----LSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGI-TECDNM 
                          L L+ TTDFF+PLVEDPY+MGRIA ANVLSD YA+GI T    M 
                     FGTQPLYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTPPSTM 
gi|151559141|d-20665 tgaccctcaaaagtttccgggctcagcagggagctggtgcgacaccaaa 
                     tgcactattgccatttcttaacattggtcccattcacactgtgcccgct 
                     cccggatgcctgcctcagtatgtcgactacgtggctgctgtcaaagtcg 


SPP00000033_1.0  174 LMLLSVSQSMSEEE-REKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWI 
                     LML+  +  +     R  VT  M+ GF DA  E GT VTGGQT +NPW  
                     LMLVCAATEIEPPALRAGVTQTMMAGFIDACHEAGTQVTGGQTTLNPWP 
gi|151559141|d-20518 cacgtggagagccgccgggacaaaggtaggtcgggacgaggcaacactc 
                     ttttgcccataccctgcgtcacttcgttacgaacgcatcggacctacgc 
                     ggcgtgaagtgtagtatcaagcgggacttcccgtttacaatggggtggg 


SPP00000033_1.0  222 IIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPE 
                     +IGGVA VV    EF+MPD+A  GD +VLTKPLGTQVA+N +QWL   E 
                     LIGGVAEVVLPRGEFLMPDAAQPGDTIVLTKPLGTQVAINLYQWLGQME 
gi|151559141|d-20371 cagggggggcccggtcacgggccggaagcaaccgacggaactctcgcag 
                     ttggtcatttcggatttcaccacgactttcactgcatctataagtgata 
                     ccattcaccctacgtaggtagggccctgtgaccaggacctccggcaagg 


SPP00000033_1.0  271 RWNKVKMVV                          -SREEVELAYQEAM 
                       + + ++                               ++  AY  A  
                     DAHYLHLLE          -:M[atg]        LTPADICRAYDVAC 
gi|151559141|d-20224 ggcttcccgAGTCTAGA  Intron 1   AAGTGcacggatcgtgggt 
                     acaatatta <1-----[20196:19945]-1>  tcccatggcaatcg 
                     ttccgttgg                          gcagtcttcctgtt 


SPP00000033_1.0  293 FNMATLN-RTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFV 
                     ++MA LN R A  L+ +  AHA TDITGFGILGH+QNLA+ Q+  V +  
                     LSMAHLNARAAQLLLESGAAHAVTDITGFGILGHAQNLARNQKAPVDME 
gi|151559141|d-19900 caagccagaggccctgagggcggagaagtgacgcgcacgcacagcggag 
                     tgtcatacgccatttaggccactcatcgtgttgacaatcgaaacctata 
                     ttgctccaatcggtaatttgccctcactcgtggccatagacgatcgcgg 


SPP00000033_1.0  341 IHNLPIIAKMAAVSKA--SGR-FGLLQGTSAETSGGLLICLPREQAAR- 
                     I  LPII  M +  +A   G+ F LL+G SAETSGGLLIC       R  
                     IDVLPIIRGMTSADRALQGGKMFRLLEGFSAETSGGLLICFGASSTERS 
gi|151559141|d-19753 aggccaacgaaaggcgtcggaatcccggttggaaggccattggtaagca 
                     tattcttggtcgcagctaggattgttagtccacgggtttgtgccgcagg 
                     ttatgctgtggcattagataagcatggcctggccctactcctaccaggc 


SPP00000033_1.0  386 -------FCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEV   
                            FC ++      +   AWIVG V  G+R ARI+D  +++EV   
                     SQVVARQFCEKL--ATVDDHWPAWIVGRVVPGSREARILDHVKILEV   
gi|151559141|d-19606 acgggccttgac  gagggctcgtaggaggcgacggaacgcgaatgg   
                     gattcgatgaat  cctaaagccgttggttcgggacgttaatattat   
                     cacccggtcaag  cgactcggagtacagcgaccgtacctcgataat   


//
Making a M in phase 1 intron
>gi|151559141|dbj|AP006498.2|:subseq(458165,30944).pep
FRLTRYSTLKGCGCKVPQSELLEWMTATKNLLRSPMKSFSRPGGLMSTSNTESSTPGDVS
VELGVGMDASVVRLTQLSSRQQSTEKDAENAPSFGTQPLYLISTTDFFFPLVEDPYLMGR
IAAANVLSDAYALGIRTPPSTMLMLVCAATEIEPPALRAGVTQTMMAGFIDACHEAGTQV
TGGQTTLNPWPLIGGVAEVVLPRGEFLMPDAAQPGDTIVLTKPLGTQVAINLYQWLGQME
DAHYLHLLEMLTPADICRAYDVACLSMAHLNARAAQLLLESGAAHAVTDITGFGILGHAQ
NLARNQKAPVDMEIDVLPIIRGMTSADRALQGGKMFRLLEGFSAETSGGLLICFGASSTE
RSSQVVARQFCEKLATVDDHWPAWIVGRVVPGSREARILDHVKILEV
//
>gi|151559141|dbj|AP006498.2|:subseq(458165,30944).[20944:19470].sp
TTCCGCCTTACGCGGTATTCTACACTTAAGGGCTGTGGTTGCAAGGTTCCTCAAAGTGAG
TTGCTCGAGTGGATGACCGCAACCAAGAACCTCTTGCGTTCACCAATGAAGAGCTTTTCC
AGACCTGGCGGCTTGATGAGTACAAGCAACACAGAGTCGAGCACGCCAGGAGACGTCTCC
GTGGAACTCGGGGTTGGCATGGACGCCTCCGTGGTACGCTTGACCCAGCTCTCCAGCAGA
CAACAGAGCACGGAGAAAGACGCCGAGAATGCGCCCTCCTTCGGCACCCAGCCGCTATAT
CTGATCAGCACTACGGACTTCTTTTTCCCACTGGTTGAAGATCCGTATCTCATGGGACGC
ATTGCAGCCGCGAATGTGCTGTCCGATGCGTACGCTCTGGGTATCCGAACACCACCGAGT
ACCATGCTGATGCTCGTGTGTGCGGCAACAGAGATTGAGCCTCCAGCGCTTCGAGCTGGC
GTAACACAGACCATGATGGCGGGATTCATTGATGCCTGCCACGAGGCTGGTACTCAAGTC
ACAGGAGGTCAGACGACGCTGAATCCGTGGCCGCTCATCGGAGGTGTTGCCGAAGTCGTC
CTCCCTCGAGGCGAGTTTCTAATGCCGGATGCAGCGCAGCCGGGCGACACCATTGTGCTT
ACGAAACCCCTCGGAACGCAGGTAGCCATCAATCTCTACCAGTGGCTCGGACAAATGGAG
GATGCTCACTACTTGCATCTTCTGGAGATGCTGACCCCAGCGGATATCTGTCGTGCCTAC
GATGTGGCTTGTCTTAGTATGGCCCATCTCAACGCAAGAGCTGCCCAGCTGCTTTTAGAA
AGTGGTGCTGCGCACGCCGTCACTGACATAACCGGTTTCGGGATTCTGGGGCACGCCCAA
AATCTAGCGCGAAACCAGAAAGCTCCCGTGGACATGGAGATTGATGTACTTCCGATCATT
CGGGGTATGACGAGCGCAGATCGTGCATTGCAAGGTGGAAAAATGTTCCGACTTCTGGAG
GGCTTCTCTGCGGAGACCAGCGGCGGTCTACTCATTTGCTTCGGTGCATCCAGCACAGAG
CGGAGCAGCCAAGTCGTCGCCCGGCAGTTTTGCGAAAAACTGGCCACGGTAGACGATCAC
TGGCCGGCATGGATTGTAGGCAGAGTGGTCCCGGGAAGCCGCGAGGCTAGAATCCTCGAT
CACGTGAAAATTTTAGAAGTT
//
gi|151559141|dbj|AP006498.2|:subseq(458165,30944)	GeneWise	match	20944	19472	298.34	-	.	gi|151559141|dbj|AP006498.2|:subseq(458165,30944)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(458165,30944)	GeneWise	cds	20944	20197	0.00	-	0	gi|151559141|dbj|AP006498.2|:subseq(458165,30944)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(458165,30944)	GeneWise	intron	20196	19945	0.00	-	.	gi|151559141|dbj|AP006498.2|:subseq(458165,30944)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(458165,30944)	GeneWise	cds	19944	19472	0.00	-	2	gi|151559141|dbj|AP006498.2|:subseq(458165,30944)-genewise-prediction-1
//