genewise output Score 216.67 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000048_1.0 2 FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDG F PE GL D++LTKFT G CK+PQK L K L + N FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVA supercontig_1.-20164 tacgacgccggtccaataccagtgtagccagccaccggtcgataaggg tacactgtccaggtcatcataggggatcaaattattattgcacaactc ctaggccgtccgcgcgccgcgctacggcgacgcggcaccagcgcccgt SPP00000048_1.0 50 YLIGSGMDCAVIPLKRHKDYLLI IG G+D V RH L+ -:D[gat] GTIGVGLDSCVTET-RHPGLYLV supercontig_1.-20020 GGTTCAGA Intron 1 CAGATgaagggcgatgaga cccgctcg <1-----[20019:19933]-1> gctgtgtaggtcac gacgtatt acctttccctccgg gtgtgtcc SPP00000048_1.0 73 QTVD FYPMVNDPELL QT D F+P++ DP + QTTD F:F[ttc] FFPLIEDPYQM supercontig_1.-19864 caagTTGTGAGTT Intron 2 AAGCttccaggctca acca <2-----[19850:19709]-2> ttcttaacaat gccc ccgctgttcag SPP00000048_1.0 89 GRIALANVLSDVYAVGVTQFDTVEMI GRIA ANVLSD+YA+GV++ D + M+ GRIACANVLSDLYAMGVSECDNMLML supercontig_1.-19674 GTCAGTG Intron 3 TAGgcagtgagtagttgaggtgtgaacac <0-----[19674:19568]-0>ggtcgcattgatactgtcagaatttt tatgccttgctgcagcgcgctcgcgg SPP00000048_1.0 115 VSTSTSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCI + ST+++ +E +V LVMKGF + + G T ++ Q NPW + LGVSTTLTPEESVIVTPLVMKGFHDLCQEAG---TNVLGGQTVKNPWFL supercontig_1.-19489 cggaaatacggtgagaccgaagtcgctcggg aagcggcagaacttt tgtgcctccaactttcctttagtaatgaacg cattggactaacgtt ctaccgggagatctcggtcgactccgcagca ccgtcgagcatcgtg SPP00000048_1.0 164 IGGIATSVCRSEEIILP NAQPGD +GG+ATSV E+I+P A+ GD LGGVATSVVGRHEMIMP S:D[gat] GAKSGD supercontig_1.-19351 cggggatgggccgaaacGGTACACG Intron 4 CAGATggaagg tggtcccttggaatttc <1-----[19299:19216]-1> gcagga cccccattctttagcga caaccc SPP00000048_1.0 188 VLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSECSDADIKETFEIAVKS VLVLTKPLG Q+A++AH W L E+YK+L ++ + E +E A+ + VLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITN supercontig_1.-19195 gcgcaaccgaccggagcctacagcgctaccgggcaagcgaggtgcgaaa ttttcactgaatctacaagttcacagaagtagttcaaattacaaactca ccgccggtatagcctccggggatcaacgcgcctcgcggtcaccatctgc SPP00000048_1.0 237 MTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINK MT L++ AA LM ++ AH ATD+TGFG+LGHA NLA+ QK+ V F+I+ MTRLSRVAARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDV supercontig_1.-19048 aaccacgggccacgtggcggaggagtgacgcgcacgcacagagatgagg tcgtggtccgttgatgcacccatcgtgttgacgatcggaaagtatatat gatgccgcccggaacttctcgtgtttatgtccgcttttggcccttattc SPP00000048_1.0 286 LPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICL P++++++ + + G S ETSGGLLI L FPVLRHMIAMERAT-PVFHLLEGTSAETSGGLLIAL supercontig_1.-18901 tcgcccaagagcga cgtcccggatggatggccagc tcttgattctagcc cttattagcccaccggtttct caggccgtcggccc ccctgggctacggctatctgg // Making a D in phase 1 intron Making a F in phase 2 intron Making a D in phase 1 intron >supercontig_1.1:subseq(1135798,30164).pep FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVADGTIGVGLDSCV TETRHPGLYLVQTTDFFFPLIEDPYQMGRIACANVLSDLYAMGVSECDNMLMLLGVSTTL TPEESVIVTPLVMKGFHDLCQEAGTNVLGGQTVKNPWFLLGGVATSVVGRHEMIMPDGAK SGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRVA ARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERATPVFHL LEGTSAETSGGLLIAL // >supercontig_1.1:subseq(1135798,30164).[20164:18795].sp TTCAATCCAGAGACGCTCGGCCTGCCTGCCGACTGGCGCCTGACCAAGTTCACCCAGCTC AAGGGCTGTGGATGCAAGGTGCCCCAGAAAGACCTGCTCAAGCTGCTCGAAGTCTTCCGA GCGAACTCGAACAACGCCGTGGCTGATGGAACCATCGGTGTTGGTCTCGACAGCTGTGTC ACCGAGACGCGGCATCCGGGTCTGTATCTCGTCCAGACCACCGACTTCTTCTTCCCGCTC ATTGAGGATCCTTACCAAATGGGTCGAATTGCGTGCGCCAATGTTTTGAGCGATTTGTAC GCAATGGGCGTGTCCGAGTGCGATAACATGCTCATGCTGCTCGGTGTAAGCACCACGTTG ACGCCAGAGGAATCTGTCATTGTCACGCCGCTTGTCATGAAAGGCTTTCACGACCTGTGC CAAGAGGCCGGAACCAACGTGCTTGGCGGGCAAACGGTCAAAAATCCCTGGTTTTTGCTC GGCGGCGTCGCCACATCTGTTGTCGGTCGTCATGAAATGATCATGCCAGATGGCGCAAAA AGCGGCGACGTCCTCGTGCTCACCAAGCCGCTTGGAAATCAACTGGCCGTCAATGCCCAC CAGTGGATGCTGACAGATCCCGAACGATACAAGCGCCTGGACGGCGTTCTCACGAACGAG CAGGTTATCGAAGCCTACGAACATGCCATTACGAACATGACACGTCTGAGCCGCGTGGCC GCCCGCCTGATGCGAGAATTCGGTGCTCACGCTGCCACGGATGTGACTGGTTTTGGAATT CTGGGTCACGCCCGGAACCTTGCTCGTAGTCAGAAGGACAGCGTCAATTTTGAAATTGAT GTCTTCCCAGTGCTGCGCCACATGATTGCCATGGAGCGCGCCACCCCCGTCTTCCATCTG CTGGAGGGCACTTCAGCCGAGACGTCCGGTGGACTTCTCATTGCGCTG // supercontig_1.1:subseq(1135798,30164) GeneWise match 20164 18797 218.66 - . supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise cds 20164 20020 0.00 - 0 supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise intron 20019 19933 0.00 - . supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise cds 19932 19851 0.00 - 2 supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise intron 19850 19709 0.00 - . supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise cds 19708 19675 0.00 - 1 supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise intron 19674 19568 0.00 - . supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise cds 19567 19300 0.00 - 0 supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise intron 19299 19216 0.00 - . supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 supercontig_1.1:subseq(1135798,30164) GeneWise cds 19215 18797 0.00 - 2 supercontig_1.1:subseq(1135798,30164)-genewise-prediction-1 //