genewise output Score 211.98 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000056_1.0 2 FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDG F PE+ GL D+RLTKF+ L+G G KVPQ L +LL V+ + FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLE-VFRANSNNAVA supercontig_1.-20311 tacgacgccggtccaataccagtgtagccagccaccg gtcgataaggg tacactgtccaggtcatcataggggatcaaattatta ttgcacaactc ctaggccgtccgcgcgccgcgctacggcgacgcggca ccagcgcccgt SPP00000056_1.0 51 GPNKEEGVGIGLDSSVIALKH-D G +G+GLDS V +H K:D[gat] GT-----IGVGLDSCVTETRHPG supercontig_1.-20167 GGTTCAGA Intron 1 CAGATga agggcgatgagacccg <1-----[20166:20080]-1> gc tgtgtaggtcacgacg ac ctttccctccgggtgt SPP00000056_1.0 74 LFLVQSVD FYPLIDDPFML L+LVQ+ D F+PLI+DP+++ LYLVQTTD F:F[ttc] FFPLIEDPYQM supercontig_1.-20023 ctcgcaagTTGTGAGTT Intron 2 AAGCttccaggctca tattacca <2-----[19997:19856]-2> ttcttaacaat gtccgccc ccgctgttcag SPP00000056_1.0 94 GKIALANVVSDVFAVGATEIDQIKLI G+IA ANV+SD++A+G +E D + ++ GRIACANVLSDLYAMGVSECDNMLML supercontig_1.-19821 GTCAGTG Intron 3 TAGgcagtgagtagttgaggtgtgaacac <0-----[19821:19715]-0>ggtcgcattgatactgtcagaatttt tatgccttgctgcagcgcgctcgcgg SPP00000056_1.0 120 VTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGG + T +T +E +V P+VM+GF + + V G +NPW ++GG LGVSTTLTPEESVIVTPLVMKGFHDLCQEAGTNVLGGQTVKNPWFLLGG supercontig_1.-19636 cggaaatacggtgagaccgaagtcgctcgggaagcggcagaactttcgg tgtgcctccaactttcctttagtaatgaacgcattggactaacgtttgg ctaccgggagatctcggtcgactccgcagcaccgtcgagcatcgtgccc SPP00000056_1.0 169 AASAVCHRSELIMP NAQPGDALV A++V R E+IMP A+ GD LV VATSVVGRHEMIMP Y:D[gat] GAKSGDVLV supercontig_1.-19489 ggatgggccgaaacGGTACACG Intron 4 CAGATggaagggcg tcccttggaatttc <1-----[19446:19363]-1> gcaggattt ccattctttagcga caacccccg SPP00000056_1.0 193 LTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRIALESMS LTKPLG QLA NA+ WM + + +L +T + + Y A+ +M+ LTKPLGNQLAVNAHQWM-LTDPERYKRLDGVLTNEQVIEAYEHAITNMT supercontig_1.-19333 caaccgaccggagccta cagcgctaccgggcaagcgaggtgcgaaaaa tcactgaatctacaagt tcacagaagtagttcaaattacaaactcatc ccggtatagcctccggg gatcaacgcgcctcgcggtcaccatctgcga SPP00000056_1.0 242 RLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLP RL++ A LM+++GAHAATDVTGFG+ GHA NLA Q V+F +D P RLSRVAARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFP supercontig_1.-19189 ccacgggccacgtggcggaggagtgacgcgcacgcacagagatgaggtc gtggtccgttgatgcacccatcgtgttgacgatcggaaagtatatattc tgccgcccggaacttctcgtgtttatgtccgcttttggcccttattcca SPP00000056_1.0 291 IIKNVREIAETLGRGAKLLAGKAVETSGGLLICL---------PREAAA +++++ + E LL G + ETSGGLLI L R A VLRHMIAM-ERATPVFHLLEGTSAETSGGLLIALGPSPDGKLDARANAQ supercontig_1.-19042 gcccaaga gcgacgtcccggatggatggccagcgctcggacggcgagc ttgattct agcccttattagcccaccggtttctgcccagatacgcaca ggccgtcg gcccccctgggctacggctatctggtcgatcattgaaccg SPP00000056_1.0 331 GFCEEYRRCTK-HEAWIVGHVEK +C+E R + +A+I+G V + RYCDELARQDRGFQAYIIGRVVE G:G[gga] supercontig_1.-18898 cttggcgccgcgtcgtaagcgggGGTACGTG Intron 5 TAGGA gagaatcgaaggtacattggtta <1-----[18828:18705]-1> ctccggccgttccactctctata SPP00000056_1.0 354 ARGVKMNPNLNILSVE +R ++PNL I+ V+ SRDAVLSPNLQIIEVD supercontig_1.-18702 tcgggctcaccaaggg cgacttccatattata cctttgtgtgaccgtt // Making a D in phase 1 intron Making a F in phase 2 intron Making a D in phase 1 intron Making a G in phase 1 intron >supercontig_1.1:subseq(1135651,30311).pep FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVADGTIGVGLDSCV TETRHPGLYLVQTTDFFFPLIEDPYQMGRIACANVLSDLYAMGVSECDNMLMLLGVSTTL TPEESVIVTPLVMKGFHDLCQEAGTNVLGGQTVKNPWFLLGGVATSVVGRHEMIMPDGAK SGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRVA ARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERATPVFHL LEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDELARQDRGFQAYIIGRVVEGSRDAV LSPNLQIIEVD // >supercontig_1.1:subseq(1135651,30311).[20311:18653].sp TTCAATCCAGAGACGCTCGGCCTGCCTGCCGACTGGCGCCTGACCAAGTTCACCCAGCTC AAGGGCTGTGGATGCAAGGTGCCCCAGAAAGACCTGCTCAAGCTGCTCGAAGTCTTCCGA GCGAACTCGAACAACGCCGTGGCTGATGGAACCATCGGTGTTGGTCTCGACAGCTGTGTC ACCGAGACGCGGCATCCGGGTCTGTATCTCGTCCAGACCACCGACTTCTTCTTCCCGCTC ATTGAGGATCCTTACCAAATGGGTCGAATTGCGTGCGCCAATGTTTTGAGCGATTTGTAC GCAATGGGCGTGTCCGAGTGCGATAACATGCTCATGCTGCTCGGTGTAAGCACCACGTTG ACGCCAGAGGAATCTGTCATTGTCACGCCGCTTGTCATGAAAGGCTTTCACGACCTGTGC CAAGAGGCCGGAACCAACGTGCTTGGCGGGCAAACGGTCAAAAATCCCTGGTTTTTGCTC GGCGGCGTCGCCACATCTGTTGTCGGTCGTCATGAAATGATCATGCCAGATGGCGCAAAA AGCGGCGACGTCCTCGTGCTCACCAAGCCGCTTGGAAATCAACTGGCCGTCAATGCCCAC CAGTGGATGCTGACAGATCCCGAACGATACAAGCGCCTGGACGGCGTTCTCACGAACGAG CAGGTTATCGAAGCCTACGAACATGCCATTACGAACATGACACGTCTGAGCCGCGTGGCC GCCCGCCTGATGCGAGAATTCGGTGCTCACGCTGCCACGGATGTGACTGGTTTTGGAATT CTGGGTCACGCCCGGAACCTTGCTCGTAGTCAGAAGGACAGCGTCAATTTTGAAATTGAT GTCTTCCCAGTGCTGCGCCACATGATTGCCATGGAGCGCGCCACCCCCGTCTTCCATCTG CTGGAGGGCACTTCAGCCGAGACGTCCGGTGGACTTCTCATTGCGCTGGGTCCCTCGCCA GATGGCAAACTTGATGCGCGAGCAAACGCCCAGCGCTATTGCGACGAGCTGGCCCGCCAG GATCGTGGCTTCCAAGCCTATATCATTGGCCGTGTAGTTGAAGGATCCCGCGATGCTGTT CTGTCTCCGAATCTGCAAATCATCGAGGTTGAT // supercontig_1.1:subseq(1135651,30311) GeneWise match 20311 18655 223.96 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 20311 20167 0.00 - 0 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise intron 20166 20080 0.00 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 20079 19998 0.00 - 2 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise intron 19997 19856 0.00 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 19855 19822 0.00 - 1 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise intron 19821 19715 0.00 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 19714 19447 0.00 - 0 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise intron 19446 19363 0.00 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 19362 18829 0.00 - 2 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise intron 18828 18705 0.00 - . supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 supercontig_1.1:subseq(1135651,30311) GeneWise cds 18704 18655 0.00 - 2 supercontig_1.1:subseq(1135651,30311)-genewise-prediction-1 //