
genewise output
Score 283.81 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000048_1.0    1 MFQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDG 
                     +F P   GL+P F LT F+   G  CK+PQ  L  YL     + K N+  
                     IFDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLLGYLEDIANDLKPNE- 
gi|299737255|gb20000 atgcggcgcgcttacagtagcagtgtatccgatcgtcggagagtacag  
                     ttactatgtacctctcatgctaggggatcacattgataatcaatacaa  
                     ccccgtttttggcaggtccgggccacaggggagcacgatccccggatg  


SPP00000048_1.0   50 YLIGSGMDCAVIPLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLS 
                          GMD +V+ +   KD  +I T DFF+P V DP + G+IA ANVLS 
                     ---TPGMDSSVVKISHGKDLYMISTTDFFFPSVEDPYVQGKIACANVLS 
gi|299737255|gb20144    acgagtaggaaacgagttaataagtttctgggctgcgaagtgagct 
                        ccgtacgttatgagaatattcccatttcctaacatagatcgcattc 
                        gtcgcgccggctccgtgcgcgggtcccgcgacgctgcgcgcgcgcg 


SPP00000048_1.0   99 DVYAVGVTQFDTVEMIVSTSTSFSEKERDVVIGLVMKGFQNSLKANGYR 
                     DVYA+GVT+ DT+ MI+     +SEKERDVV   +++GF +  +      
                     DVYAMGVTEVDTMLMILGVCRDMSEKERDVVTTQMIRGFNDLARK---A 
gi|299737255|gb20282 ggtgaggagggaacaacggtcgaagagcgggaacaacgtagcgca   g 
                     atactgtcatactttttgtggatgaaagattccattggtaatcga   c 
                     cgcggcggggcggcgcccgtgcgcgggctcgggggccgtcttgcg   g 


SPP00000048_1.0  148 NTPLIIRQLKINPWCIIGGIATSVCR                        
                      T +   Q  +NPW I+GG+A SV                          
                     ETNVTGGQTVMNPWPIVGGVAMSVRS          S:E[gaa]      
gi|299737255|gb20420 gaagaggcagaactcagggggaagcaGGTACGTC  Intron 1      
                     acatcggacttacgcttggtctgtgg <1-----[20499:20595]   
                     ggcggtgggcgcaggttacccgcgcc                        


SPP00000048_1.0  174      EEIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLL 
                           EII P NAQ GDV++LTK LG Q+A++   W+  + E+++++  
                          SEIIRPVNAQVGDVIILTKALGTQVAVNLFQWR-KRPERWQRVA 
gi|299737255|gb20593 TAGAAagaaccgagcggggaacaagtgacgggactctc accgctccgg 
                     -1>  gattgctacatgattttcactgcatctattagg agcaggagtc 
                          cgctccgcgggccgccccgggcgaccgcgcagc gctgcgacga 


SPP00000048_1.0  219 SECSDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGH 
                        +  D +  F +A +SM+ LN NAA LMHKY AH ATD+TGFG+L H 
                     DVVTVQDAEHGFAMASESMSRLNLNAARLMHKYGAHSATDVTGFGILAH 
gi|299737255|gb20727 gggagcgggcgtgagtgtaaccacaggccacatggctgaggagtgacgc 
                     attctaacaagtctccactggtataccgttaaagcacccatcgtgttca 
                     cggccgccgcgcgggcgcgtgccgccagcgcgccgcagcccgcctcggc 


SPP00000048_1.0  268 ANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGG 
                     A N A+ Q   V F+I+ LPII++++K +  +G S ++  G + ETSGG 
                     ARNQAKSQTRDVNFEIHTLPIIQHMVKVNETIGNSFRLLEGFAAETSGG 
gi|299737255|gb20874 gcacgatcacggatgacaccaaccagagagaagattcccggtgggatgg 
                     cgaacacacgatatatactcttaattataactgactgttagtccaccgg 
                     gtcgcaggcccgctgccgggccgcgcggcggcccgctgcgtcgcgggcg 


SPP00000048_1.0  317 LLICLPADAADKFCRDFEEATNGEQKSFQIGHVTAANESDAVLCEDVEF 
                     LL+CLPA+ AD +  ++  A +G+   + +G V A ++ DA +  +  + 
                     LLLCLPAEHADAYIAELR-ALDGKP-AWVVGRVVAGSK-DARIVANPTI 
gi|299737255|gb21021 ccttccggcgggtaggcc gtggac gtgggcggggaa ggcaggacaa 
                     tttgtccaacacatcatg ctagac cgttggttcgga acgttcacct 
                     gggcgcggtgcgccgggt agccgc ggcccccccccg ccccgccggc 


SPP00000048_1.0  366 IEVSL                                             
                     +EV+L                                             
                     LEVTL                                             
gi|299737255|gb21159 cggac                                             
                     tatct                                             
                     cacgc                                             


//
Making a E in phase 1 intron
>gi|299737255|gb|GL376634.1|:subseq(770913,30491).pep
IFDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLLGYLEDIANDLKPNETPGMDSSVVKIS
HGKDLYMISTTDFFFPSVEDPYVQGKIACANVLSDVYAMGVTEVDTMLMILGVCRDMSEK
ERDVVTTQMIRGFNDLARKAETNVTGGQTVMNPWPIVGGVAMSVRSESEIIRPVNAQVGD
VIILTKALGTQVAVNLFQWRKRPERWQRVADVVTVQDAEHGFAMASESMSRLNLNAARLM
HKYGAHSATDVTGFGILAHARNQAKSQTRDVNFEIHTLPIIQHMVKVNETIGNSFRLLEG
FAAETSGGLLLCLPAEHADAYIAELRALDGKPAWVVGRVVAGSKDARIVANPTILEVTL
//
>gi|299737255|gb|GL376634.1|:subseq(770913,30491).[20000:21173].sp
ATCTTCGACCCCGTGGATCTTGGTCTTGATCCGTCGTTCACACTGACGGATTTCAGCGCG
CTGAAGGGCTGCGGATGCAAATTGCCGCAGGCGAAATTGCTCGGATACCTGGAAGATATC
GCCAACGACTTGAAGCCAAATGAGACGCCTGGCATGGACTCGAGCGTCGTGAAGATCAGT
CACGGCAAGGATTTGTACATGATCTCGACGACGGATTTCTTCTTCCCGTCCGTGGAAGAC
CCGTACGTTCAGGGCAAGATCGCGTGCGCGAACGTGCTCTCGGACGTGTACGCGATGGGC
GTGACGGAGGTGGACACGATGCTCATGATCCTCGGCGTGTGTCGGGACATGAGCGAGAAG
GAGCGCGATGTCGTGACGACGCAGATGATCCGCGGGTTTAACGATCTTGCGCGCAAGGCG
GAGACGAACGTGACGGGTGGGCAGACGGTCATGAACCCATGGCCGATTGTTGGAGGCGTC
GCCATGAGCGTGCGCAGCGAAAGCGAGATCATTCGCCCCGTGAACGCGCAGGTGGGCGAC
GTGATCATCCTCACCAAGGCGTTGGGCACGCAAGTCGCCGTGAACCTGTTCCAATGGCGC
AAGCGCCCTGAGCGCTGGCAACGCGTGGCAGACGTGGTGACCGTCCAGGACGCCGAGCAC
GGGTTCGCGATGGCGTCCGAGTCCATGAGTCGGCTCAACCTGAACGCCGCACGGCTCATG
CACAAGTACGGCGCGCACTCAGCGACCGACGTCACGGGCTTCGGTATCCTGGCGCACGCG
CGTAACCAGGCCAAATCGCAGACCCGCGACGTGAACTTTGAGATCCACACGCTGCCGATC
ATCCAGCACATGGTCAAGGTGAACGAGACGATCGGCAACTCGTTCCGTCTGCTCGAGGGT
TTCGCGGCCGAGACGTCGGGCGGGCTGCTGTTGTGCCTGCCCGCGGAGCATGCGGACGCG
TACATCGCGGAGCTGCGTGCATTGGACGGCAAGCCCGCGTGGGTCGTCGGCCGCGTCGTC
GCCGGCAGCAAGGACGCCCGCATCGTGGCCAACCCGACGATCCTCGAAGTCACGCTC
//
gi|299737255|gb|GL376634.1|:subseq(770913,30491)	GeneWise	match	20000	21173	288.80	+	.	gi|299737255|gb|GL376634.1|:subseq(770913,30491)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770913,30491)	GeneWise	cds	20000	20498	0.00	+	0	gi|299737255|gb|GL376634.1|:subseq(770913,30491)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770913,30491)	GeneWise	intron	20499	20595	0.00	+	.	gi|299737255|gb|GL376634.1|:subseq(770913,30491)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770913,30491)	GeneWise	cds	20596	21173	0.00	+	2	gi|299737255|gb|GL376634.1|:subseq(770913,30491)-genewise-prediction-1
//
