genewise output
Score 255.54 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000047_1.0   38 FRLTRFADLKGRGCKVPQ                          DVLSK 
                     FRLTR++ LKG GCKVPQ                          DV  + 
                     FRLTRYSTLKGCGCKVPQ          -:R[aga]        DVSVE 
gi|151559141|d-21472 tccacttacagtgtagccAGTGAGTT  Intron 1   CAGGAggtgg 
                     tgtcgacctaggggatca <1-----[21417:21304]-1>  atcta 
                     cctggttatgcttcgtta                          cccga 


SPP00000047_1.0   61 LVSALQQDYSAQDQEPQFLNVAIPRIGIGLDCSVIP-LRHGGLCLVQTT 
                     L   +  D S       +  ++  +     D    P      L L+ TT 
                     L--GVGMDASVV----RLTQLSSRQQSTEKDAENAPSFGTQPLYLISTT 
gi|151559141|d-21286 c  gggaggtgg    ctacctaaccaagagggagcttgaccctcaaaa 
                     t  gtgtacctt    gtcatcggaagcaaacaaccctgcactattgcc 
                     c  gtcgcccga    cgcgcccaagcggaccgtgcccccggatgcctg 


SPP00000047_1.0  109 DFFYPIVDDPYMMGKIACANVLSDLYAMGV-TDCDNMLMLLAVSTKMTE 
                     DFF+P+V+DPY+MG+IA ANVLSD YA+G+ T    MLML+  +T++   
                     DFFFPLVEDPYLMGRIAAANVLSDAYALGIRTPPSTMLMLVCAATEIEP 
gi|151559141|d-21157 gtttccgggctcagcagggagctggtgcgacaccaaacacgtggagagc 
                     atttcttaacattggtcccattcacactgtgcccgctttttgcccatac 
                     cctcagtatgtcgactacgtggctgctgtcaaagtcgggcgtgaagtgt 


SPP00000047_1.0  157 KE-RDVVIPLIMRGFKDSALEAGTTVTGGQSVVNPWCTIGGVASTICQP 
                        R  V   +M GF D+  EAGT VTGGQ+ +NPW  IGGVA  +    
                     PALRAGVTQTMMAGFIDACHEAGTQVTGGQTTLNPWPLIGGVAEVVLPR 
gi|151559141|d-21010 cgccgggacaaaggtaggtcgggacgaggcaacactccagggggggccc 
                     cctgcgtcacttcgttacgaacgcatcggacctacgcttggtcatttcg 
                     agtatcaagcgggacttcccgtttacaatggggtgggccattcacccta 


SPP00000047_1.0  205 NEYIVPDNAVVGDVLVLTKPLGTQVAVNAHQWIDQPERWNRIKLVV    
                      E+++PD A  GD +VLTKPLGTQVA+N +QW+ Q E  + + L+     
                     GEFLMPDAAQPGDTIVLTKPLGTQVAINLYQWLGQMEDAHYLHLLE    
gi|151559141|d-20863 ggtcacgggccggaagcaaccgacggaactctcgcagggcttcccg    
                     gatttcaccacgactttcactgcatctataagtgataacaatatta    
                     cgtaggtagggccctgtgaccaggacctccggcaaggttccgttgg    


SPP00000047_1.0  251                           -SEEDVRKAYHRAMNSMARLN-R 
                                                   D+ +AY  A  SMA LN R 
                               -:M[atg]        LTPADICRAYDVACLSMAHLNAR 
gi|151559141|d-20725 AGTCTAGA  Intron 2   AAGTGcacggatcgtgggtcaagccaga 
                      <1-----[20724:20473]-1>  tcccatggcaatcgtgtcatacg 
                                               gcagtcttcctgttttgctccaa 


SPP00000047_1.0  272 VAARLMHKYNAHGATDITGFGLLGHAQTLAAHQKKDVSFVIHNLPVIAK 
                      A  L+    AH  TDITGFG+LGHAQ LA +QK  V + I  LP+I   
                     AAQLLLESGAAHAVTDITGFGILGHAQNLARNQKAPVDMEIDVLPIIRG 
gi|151559141|d-20401 ggccctgagggcggagaagtgacgcgcacgcacagcggagaggccaacg 
                     ccatttaggccactcatcgtgttgacaatcgaaacctatatattcttgg 
                     tcggtaatttgccctcactcgtggccatagacgatcgcggttatgctgt 


SPP00000047_1.0  321 MAAVAKAC--GNMFQLLQGHSAETSGGLLICLPREQ--------AAAYC 
                     M +  +A   G MF+LL+G SAETSGGLLIC             A  +C 
                     MTSADRALQGGKMFRLLEGFSAETSGGLLICFGASSTERSSQVVARQFC 
gi|151559141|d-20254 aaaggcgtcggaatcccggttggaaggccattggtaagcaacgggcctt 
                     tcgcagctaggattgttagtccacgggtttgtgccgcagggattcgatg 
                     ggcattagataagcatggcctggccctactcctaccaggccacccggtc 


SPP00000047_1.0  360 KDIEK-QEGYQAWIIGIVEKGNKTARIIDKPRVIEV              
                     + +    + + AWI+G V  G++ ARI+D  +++EV              
                     EKLATVDDHWPAWIVGRVVPGSREARILDHVKILEV              
gi|151559141|d-20107 gacgagggctcgtaggaggcgacggaacgcgaatgg              
                     aatcctaaagccgttggttcgggacgttaatattat              
                     aagcgactcggagtacagcgaccgtacctcgataat              


//
Making a R in phase 1 intron
Making a M in phase 1 intron
>gi|151559141|dbj|AP006498.2|:subseq(457637,31472).pep
FRLTRYSTLKGCGCKVPQRDVSVELGVGMDASVVRLTQLSSRQQSTEKDAENAPSFGTQP
LYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTPPSTMLMLVCAATEIEPPALR
AGVTQTMMAGFIDACHEAGTQVTGGQTTLNPWPLIGGVAEVVLPRGEFLMPDAAQPGDTI
VLTKPLGTQVAINLYQWLGQMEDAHYLHLLEMLTPADICRAYDVACLSMAHLNARAAQLL
LESGAAHAVTDITGFGILGHAQNLARNQKAPVDMEIDVLPIIRGMTSADRALQGGKMFRL
LEGFSAETSGGLLICFGASSTERSSQVVARQFCEKLATVDDHWPAWIVGRVVPGSREARI
LDHVKILEV
//
>gi|151559141|dbj|AP006498.2|:subseq(457637,31472).[21472:19998].sp
TTCCGCCTTACGCGGTATTCTACACTTAAGGGCTGTGGTTGCAAGGTTCCTCAAAGAGAC
GTCTCCGTGGAACTCGGGGTTGGCATGGACGCCTCCGTGGTACGCTTGACCCAGCTCTCC
AGCAGACAACAGAGCACGGAGAAAGACGCCGAGAATGCGCCCTCCTTCGGCACCCAGCCG
CTATATCTGATCAGCACTACGGACTTCTTTTTCCCACTGGTTGAAGATCCGTATCTCATG
GGACGCATTGCAGCCGCGAATGTGCTGTCCGATGCGTACGCTCTGGGTATCCGAACACCA
CCGAGTACCATGCTGATGCTCGTGTGTGCGGCAACAGAGATTGAGCCTCCAGCGCTTCGA
GCTGGCGTAACACAGACCATGATGGCGGGATTCATTGATGCCTGCCACGAGGCTGGTACT
CAAGTCACAGGAGGTCAGACGACGCTGAATCCGTGGCCGCTCATCGGAGGTGTTGCCGAA
GTCGTCCTCCCTCGAGGCGAGTTTCTAATGCCGGATGCAGCGCAGCCGGGCGACACCATT
GTGCTTACGAAACCCCTCGGAACGCAGGTAGCCATCAATCTCTACCAGTGGCTCGGACAA
ATGGAGGATGCTCACTACTTGCATCTTCTGGAGATGCTGACCCCAGCGGATATCTGTCGT
GCCTACGATGTGGCTTGTCTTAGTATGGCCCATCTCAACGCAAGAGCTGCCCAGCTGCTT
TTAGAAAGTGGTGCTGCGCACGCCGTCACTGACATAACCGGTTTCGGGATTCTGGGGCAC
GCCCAAAATCTAGCGCGAAACCAGAAAGCTCCCGTGGACATGGAGATTGATGTACTTCCG
ATCATTCGGGGTATGACGAGCGCAGATCGTGCATTGCAAGGTGGAAAAATGTTCCGACTT
CTGGAGGGCTTCTCTGCGGAGACCAGCGGCGGTCTACTCATTTGCTTCGGTGCATCCAGC
ACAGAGCGGAGCAGCCAAGTCGTCGCCCGGCAGTTTTGCGAAAAACTGGCCACGGTAGAC
GATCACTGGCCGGCATGGATTGTAGGCAGAGTGGTCCCGGGAAGCCGCGAGGCTAGAATC
CTCGATCACGTGAAAATTTTAGAAGTT
//
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	match	21472	20000	267.52	-	.	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	cds	21472	21418	0.00	-	0	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	intron	21417	21304	0.00	-	.	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	cds	21303	20725	0.00	-	2	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	intron	20724	20473	0.00	-	.	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	cds	20472	20000	0.00	-	2	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
//