genewise output
Score 250.50 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000055_1.0  100 LCMVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGV-TEVDNMLMLLA 
                     L ++ TTDFF+P+V+DPY+MG+IA ANVLSD YA+G+ T    MLML+  
                     LYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTPPSTMLMLVC 
gi|151559141|d-21178 ctcaaaagtttccgggctcagcagggagctggtgcgacaccaaacacgt 
                     tattgccatttcttaacattggtcccattcacactgtgcccgctttttg 
                     atgcctgcctcagtatgtcgactacgtggctgctgtcaaagtcgggcgt 


SPP00000055_1.0  148 VSTKMIEKE-RDVVIPLIMRGFKDSALEAGTSVTGGHSVVNPWCTIGGV 
                      +T++     R  V   +M GF D+  EAGT VTGG + +NPW  IGGV 
                     AATEIEPPALRAGVTQTMMAGFIDACHEAGTQVTGGQTTLNPWPLIGGV 
gi|151559141|d-21031 ggagagccgccgggacaaaggtaggtcgggacgaggcaacactccaggg 
                     cccataccctgcgtcacttcgttacgaacgcatcggacctacgcttggt 
                     gaagtgtagtatcaagcgggacttcccgtttacaatggggtgggccatt 


SPP00000055_1.0  196 ATTICQQNEFIVPDNAVVGDVLVLTKALGTQVAVNAHQWLDQSERWNRI 
                     A  +  + EF++PD A  GD +VLTK LGTQVA+N +QWL Q E  + + 
                     AEVVLPRGEFLMPDAAQPGDTIVLTKPLGTQVAINLYQWLGQMEDAHYL 
gi|151559141|d-20884 ggggcccggtcacgggccggaagcaaccgacggaactctcgcagggctt 
                     catttcggatttcaccacgactttcactgcatctataagtgataacaat 
                     caccctacgtaggtagggccctgtgaccaggacctccggcaaggttccg 


SPP00000055_1.0  245 KLVV                          -SEEDVRKAYHRAMDSMSR 
                      L+                               D+ +AY  A  SM+  
                     HLLE          -:M[atg]        LTPADICRAYDVACLSMAH 
gi|151559141|d-20737 cccgAGTCTAGA  Intron 1   AAGTGcacggatcgtgggtcaagc 
                     atta <1-----[20724:20473]-1>  tcccatggcaatcgtgtca 
                     ttgg                          gcagtcttcctgttttgct 


SPP00000055_1.0  267 LN-RVAARLMHKYNAHGATDVTGFGLLGHAQTLASHQKNEVSFVIHNLP 
                     LN R A  L+    AH  TD+TGFG+LGHAQ LA +QK  V + I  LP 
                     LNARAAQLLLESGAAHAVTDITGFGILGHAQNLARNQKAPVDMEIDVLP 
gi|151559141|d-20413 cagaggccctgagggcggagaagtgacgcgcacgcacagcggagaggcc 
                     tacgccatttaggccactcatcgtgttgacaatcgaaacctatatattc 
                     ccaatcggtaatttgccctcactcgtggccatagacgatcgcggttatg 


SPP00000055_1.0  315 VIAKMAAVAKAC--GNMFQLLQGHSAETSGGLLICLPREQ--------A 
                     +I  M +  +A   G MF+LL+G SAETSGGLLIC             A 
                     IIRGMTSADRALQGGKMFRLLEGFSAETSGGLLICFGASSTERSSQVVA 
gi|151559141|d-20266 aacgaaaggcgtcggaatcccggttggaaggccattggtaagcaacggg 
                     ttggtcgcagctaggattgttagtccacgggtttgtgccgcagggattc 
                     ctgtggcattagataagcatggcctggccctactcctaccaggccaccc 


SPP00000055_1.0  354 AAYCKDIEK-QEGCQAWIIGIVEKGSRTARIIDKPRVIEV          
                       +C+ +    +   AWI+G V  GSR ARI+D  +++EV          
                     RQFCEKLATVDDHWPAWIVGRVVPGSREARILDHVKILEV          
gi|151559141|d-20119 ccttgacgagggctcgtaggaggcgacggaacgcgaatgg          
                     gatgaatcctaaagccgttggttcgggacgttaatattat          
                     ggtcaagcgactcggagtacagcgaccgtacctcgataat          


//
Making a M in phase 1 intron
>gi|151559141|dbj|AP006498.2|:subseq(457637,31472).pep
LYLISTTDFFFPLVEDPYLMGRIAAANVLSDAYALGIRTPPSTMLMLVCAATEIEPPALR
AGVTQTMMAGFIDACHEAGTQVTGGQTTLNPWPLIGGVAEVVLPRGEFLMPDAAQPGDTI
VLTKPLGTQVAINLYQWLGQMEDAHYLHLLEMLTPADICRAYDVACLSMAHLNARAAQLL
LESGAAHAVTDITGFGILGHAQNLARNQKAPVDMEIDVLPIIRGMTSADRALQGGKMFRL
LEGFSAETSGGLLICFGASSTERSSQVVARQFCEKLATVDDHWPAWIVGRVVPGSREARI
LDHVKILEV
//
>gi|151559141|dbj|AP006498.2|:subseq(457637,31472).[21178:19998].sp
CTATATCTGATCAGCACTACGGACTTCTTTTTCCCACTGGTTGAAGATCCGTATCTCATG
GGACGCATTGCAGCCGCGAATGTGCTGTCCGATGCGTACGCTCTGGGTATCCGAACACCA
CCGAGTACCATGCTGATGCTCGTGTGTGCGGCAACAGAGATTGAGCCTCCAGCGCTTCGA
GCTGGCGTAACACAGACCATGATGGCGGGATTCATTGATGCCTGCCACGAGGCTGGTACT
CAAGTCACAGGAGGTCAGACGACGCTGAATCCGTGGCCGCTCATCGGAGGTGTTGCCGAA
GTCGTCCTCCCTCGAGGCGAGTTTCTAATGCCGGATGCAGCGCAGCCGGGCGACACCATT
GTGCTTACGAAACCCCTCGGAACGCAGGTAGCCATCAATCTCTACCAGTGGCTCGGACAA
ATGGAGGATGCTCACTACTTGCATCTTCTGGAGATGCTGACCCCAGCGGATATCTGTCGT
GCCTACGATGTGGCTTGTCTTAGTATGGCCCATCTCAACGCAAGAGCTGCCCAGCTGCTT
TTAGAAAGTGGTGCTGCGCACGCCGTCACTGACATAACCGGTTTCGGGATTCTGGGGCAC
GCCCAAAATCTAGCGCGAAACCAGAAAGCTCCCGTGGACATGGAGATTGATGTACTTCCG
ATCATTCGGGGTATGACGAGCGCAGATCGTGCATTGCAAGGTGGAAAAATGTTCCGACTT
CTGGAGGGCTTCTCTGCGGAGACCAGCGGCGGTCTACTCATTTGCTTCGGTGCATCCAGC
ACAGAGCGGAGCAGCCAAGTCGTCGCCCGGCAGTTTTGCGAAAAACTGGCCACGGTAGAC
GATCACTGGCCGGCATGGATTGTAGGCAGAGTGGTCCCGGGAAGCCGCGAGGCTAGAATC
CTCGATCACGTGAAAATTTTAGAAGTT
//
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	match	21178	20000	258.48	-	.	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	cds	21178	20725	0.00	-	0	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	intron	20724	20473	0.00	-	.	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
gi|151559141|dbj|AP006498.2|:subseq(457637,31472)	GeneWise	cds	20472	20000	0.00	-	2	gi|151559141|dbj|AP006498.2|:subseq(457637,31472)-genewise-prediction-1
//