
genewise output
Score 382.27 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000032_1.0    7 FNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQ 
                     F+P    LD SF LT F+ LKG GCK+PQ  L   LE +  +        
                     FDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLLGYLEDIAND------- 
gi|299737255|gb20000 tgcggcgcgcttacagtagcagtgtatccgatcgtcggagag        
                     tactatgtacctctcatgctaggggatcacattgataatcaa        
                     cccgtttttggcaggtccgggccacaggggagcacgatcccc        


SPP00000032_1.0   56 FLGAVMPRLGIGMDTCVIPLRHG-GLSLVQTTDYIYPIVDDPYMMGRIA 
                           P    GMD+ V+ + HG  L ++ TTD+++P V+DPY++G+IA 
                     ----LKPNETPGMDSSVVKISHGKDLYMISTTDFFFPSVEDPYVQGKIA 
gi|299737255|gb20126     tacagacgagtaggaaacgagttaataagtttctgggctgcgaag 
                         tacaaccgtacgttatgagaatattcccatttcctaacatagatc 
                         ggatggtcgcgccggctccgtgcgcgggtcccgcgacgctgcgcg 


SPP00000032_1.0  104 CANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAA 
                     CANVLSD+YAMGVTE D MLM+LGV   M+++ERD V   +I+GF D A 
                     CANVLSDVYAMGVTEVDTMLMILGVCRDMSEKERDVVTTQMIRGFNDLA 
gi|299737255|gb20261 tgagctggtgaggagggaacaacggtcgaagagcgggaacaacgtagcg 
                     gcattcatactgtcatactttttgtggatgaaagattccattggtaatc 
                     cgcgcgcgcggcggggcggcgcccgtgcgcgggctcgggggccgtcttg 


SPP00000032_1.0  153 EEAGTSVTGGQTVLNPWIVLGGVATTVCQ                     
                      +A T+VTGGQTV+NPW ++GGVA +V                       
                     RKAETNVTGGQTVMNPWPIVGGVAMSVRS                     
gi|299737255|gb20408 caggaagaggcagaactcagggggaagca                     
                     gacacatcggacttacgcttggtctgtgg                     
                     cggggcggtgggcgcaggttacccgcgcc                     


SPP00000032_1.0  182                           NEFIMPDNAVPGDVLVLTKPLGT 
                                               +E+I P NA  GDV++LTK LGT 
                               P:E[gaa]        SEIIRPVNAQVGDVIILTKALGT 
gi|299737255|gb20495 GGTACGTC  Intron 1   TAGAAagaaccgagcggggaacaagtga 
                      <1-----[20496:20592]-1>  gattgctacatgattttcactgc 
                                               cgctccgcgggccgccccgggcg 


SPP00000032_1.0  206 QVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGL 
                     QVAV + QW   PE+W ++  VVT +D E  +  A  +M+RLN  AA L 
                     QVAVNLFQWRKRPERWQRVADVVTVQDAEHGFAMASESMSRLNLNAARL 
gi|299737255|gb20664 cgggactctcaccgctccgggggagcgggcgtgagtgtaaccacaggcc 
                     atctattaggagcaggagtcattctaacaagtctccactggtataccgt 
                     accgcgcagcgctgcgacgacggccgccgcgcgggcgcgtgccgccagc 


SPP00000032_1.0  255 MHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVS 
                     MH + AH+ATD+TGFGIL HA+N AK Q  +V+F IH LP++  M  V+ 
                     MHKYGAHSATDVTGFGILAHARNQAKSQTRDVNFEIHTLPIIQHMVKVN 
gi|299737255|gb20811 acatggctgaggagtgacgcgcacgatcacggatgacaccaaccagaga 
                     taaagcacccatcgtgttcacgaacacacgatatatactcttaattata 
                     gcgccgcagcccgcctcggcgtcgcaggcccgctgccgggccgcgcggc 


SPP00000032_1.0  304 KACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAW 
                     +  GN F L+ G   ETSGGLL+CLP E A  + AE+++     G  AW 
                     ETIGNSFRLLEGFAAETSGGLLLCLPAEHADAYIAELRAL---DGKPAW 
gi|299737255|gb20958 gaagattcccggtgggatggccttccggcgggtaggccgt   ggacgt 
                     actgactgttagtccaccggtttgtccaacacatcatgct   agaccg 
                     ggcccgctgcgtcgcgggcggggcgcggtgcgccgggtag   ccgcgg 


SPP00000032_1.0  353 IIGIVEKGNRTARIIDKPRIIEV                           
                     ++G V  G++ ARI+  P I+EV                           
                     VVGRVVAGSKDARIVANPTILEV                           
gi|299737255|gb21096 gggcggggaaggcaggacaacgg                           
                     ttggttcggaacgttcaccttat                           
                     cccccccccgccccgccggccac                           


//
Making a E in phase 1 intron
>gi|299737255|gb|GL376634.1|:subseq(770916,31164).pep
FDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLLGYLEDIANDLKPNETPGMDSSVVKISH
GKDLYMISTTDFFFPSVEDPYVQGKIACANVLSDVYAMGVTEVDTMLMILGVCRDMSEKE
RDVVTTQMIRGFNDLARKAETNVTGGQTVMNPWPIVGGVAMSVRSESEIIRPVNAQVGDV
IILTKALGTQVAVNLFQWRKRPERWQRVADVVTVQDAEHGFAMASESMSRLNLNAARLMH
KYGAHSATDVTGFGILAHARNQAKSQTRDVNFEIHTLPIIQHMVKVNETIGNSFRLLEGF
AAETSGGLLLCLPAEHADAYIAELRALDGKPAWVVGRVVAGSKDARIVANPTILEV
//
>gi|299737255|gb|GL376634.1|:subseq(770916,31164).[20000:21164].sp
TTCGACCCCGTGGATCTTGGTCTTGATCCGTCGTTCACACTGACGGATTTCAGCGCGCTG
AAGGGCTGCGGATGCAAATTGCCGCAGGCGAAATTGCTCGGATACCTGGAAGATATCGCC
AACGACTTGAAGCCAAATGAGACGCCTGGCATGGACTCGAGCGTCGTGAAGATCAGTCAC
GGCAAGGATTTGTACATGATCTCGACGACGGATTTCTTCTTCCCGTCCGTGGAAGACCCG
TACGTTCAGGGCAAGATCGCGTGCGCGAACGTGCTCTCGGACGTGTACGCGATGGGCGTG
ACGGAGGTGGACACGATGCTCATGATCCTCGGCGTGTGTCGGGACATGAGCGAGAAGGAG
CGCGATGTCGTGACGACGCAGATGATCCGCGGGTTTAACGATCTTGCGCGCAAGGCGGAG
ACGAACGTGACGGGTGGGCAGACGGTCATGAACCCATGGCCGATTGTTGGAGGCGTCGCC
ATGAGCGTGCGCAGCGAAAGCGAGATCATTCGCCCCGTGAACGCGCAGGTGGGCGACGTG
ATCATCCTCACCAAGGCGTTGGGCACGCAAGTCGCCGTGAACCTGTTCCAATGGCGCAAG
CGCCCTGAGCGCTGGCAACGCGTGGCAGACGTGGTGACCGTCCAGGACGCCGAGCACGGG
TTCGCGATGGCGTCCGAGTCCATGAGTCGGCTCAACCTGAACGCCGCACGGCTCATGCAC
AAGTACGGCGCGCACTCAGCGACCGACGTCACGGGCTTCGGTATCCTGGCGCACGCGCGT
AACCAGGCCAAATCGCAGACCCGCGACGTGAACTTTGAGATCCACACGCTGCCGATCATC
CAGCACATGGTCAAGGTGAACGAGACGATCGGCAACTCGTTCCGTCTGCTCGAGGGTTTC
GCGGCCGAGACGTCGGGCGGGCTGCTGTTGTGCCTGCCCGCGGAGCATGCGGACGCGTAC
ATCGCGGAGCTGCGTGCATTGGACGGCAAGCCCGCGTGGGTCGTCGGCCGCGTCGTCGCC
GGCAGCAAGGACGCCCGCATCGTGGCCAACCCGACGATCCTCGAAGTC
//
gi|299737255|gb|GL376634.1|:subseq(770916,31164)	GeneWise	match	20000	21164	394.25	+	.	gi|299737255|gb|GL376634.1|:subseq(770916,31164)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770916,31164)	GeneWise	cds	20000	20495	0.00	+	0	gi|299737255|gb|GL376634.1|:subseq(770916,31164)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770916,31164)	GeneWise	intron	20496	20592	0.00	+	.	gi|299737255|gb|GL376634.1|:subseq(770916,31164)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(770916,31164)	GeneWise	cds	20593	21164	0.00	+	2	gi|299737255|gb|GL376634.1|:subseq(770916,31164)-genewise-prediction-1
//
