TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Homo sapiens # Complete (448 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 256 2e-68 gb|GL349440.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 35 0.10 gb|GL349442.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 0.88 gb|GL349454.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 31 2.0 gb|GL349490.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.3 gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.3 gb|GL349494.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 4.4 gb|GL349468.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 4.4 gb|GL349482.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 5.7 gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 5.7 gb|GL349458.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 7.4 gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 7.4 gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 7.4 gb|GL349476.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 28 9.7 gb|GL349464.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 28 9.7 >gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.3, whole genome shotgun sequence Length = 673526 Score = 256 bits (654), Expect = 2e-68 Identities = 146/319 (45%), Positives = 191/319 (59%), Gaps = 8/319 (2%) Frame = -3 Query: 110 PTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITE 169 P IG+D +IP G+ +QTTD+FYPLVEDPY GRIACANVLSDL+AMGI+ Sbjct: 663843 PAIDNEAIGLDCSIIPTAIEGVVTIQTTDYFYPLVEDPYQQGRIACANVLSDLFAMGISR 663664 Query: 170 CDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXXXXXXXXXXNPWIIIGGVAT- 228 CD R VT +++GF D NPW IIGGVA+ Sbjct: 663663 CDTMLMILAASLEMPKDQRMIVTRELIRGFNDLATEAGTSVTGGQTVLNPWPIIGGVASA 663484 Query: 229 VVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPE------RWNKVKMVVSRE 282 VV +I P S V GDV+VLTKP+GTQVAVNA+QWL + E W+ + V+S Sbjct: 663483 VVPSDGGYIDPFSLVPGDVMVLTKPIGTQVAVNAYQWLGDHEAGKEGSNWDLIADVLSPA 663304 Query: 283 EVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIH 342 + +A+ A +MA LN++ A LM AH ATD+TGFG+LGH++NLA+ Q+ V IH Sbjct: 663303 QARVAFALASASMARLNKSGAALMVKHGAHGATDVTGFGLLGHARNLAEHQKAAVHISIH 663124 Query: 343 NLPIIAKMAAVSKASGRFGLLQGTSAETSGGLLICLP-REQAARFCSEIKSSKYGEGHQA 401 LP+I M AV+ F LL G S+ETSGGLL+ LP + AA FC++I++ +G A Sbjct: 663123 TLPVIENMPAVND-KFNFKLLDGWSSETSGGLLVALPSADAAAAFCADIEAE---DGWPA 662956 Query: 402 WIVGIVEKGNRTARIIDKP 420 WIVG V G+ +A I++ P Sbjct: 662955 WIVGSVSAGSGSADIVENP 662899 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = -1 Query: 38 FEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPP 84 F+P +LGL P +RLT ++ +KG GCKV QE L LL P PP Sbjct: 664286 FDPTSLGLPPGFRLTDYAKLKG*GCKVSQEDLHGLLESTPLPS--PP 664152 >gb|GL349440.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.8, whole genome shotgun sequence Length = 609142 Score = 35.0 bits (79), Expect = 0.10 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 12/74 (16%) Frame = -3 Query: 28 LGRSFSNYRPFEPQALGLSP-----SWRLTGFS-------GMKGUGCKVPQEALLKLLAG 75 L RS + RP P L SP SW +G S ++ P ALL+ G Sbjct: 128720 LTRSATTRRPTRPSFLSTSPFTSSHSWSRSGLSCTSLQTRRLRRRPSAPPAPALLRRRRG 128541 Query: 76 LTRPDVRPPLGRGL 89 + RP VRPP R L Sbjct: 128540 ICRPSVRPPATRTL 128499 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = -3 Query: 62 CKVPQEALLKLLAGLTRPDVRPPLGRGL---VGGQEEASQEAGLPAGAGPSPTFP 113 C EA+ ++L L P + + + L VG E +++ G+PA A +P FP Sbjct: 233195 CAAVWEAVPRILPSLDAPVYKKDIVQRLAVLVGSYEASNESGGVPAAAASAPVFP 233031 >gb|GL349442.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.10, whole genome shotgun sequence Length = 578410 Score = 32.0 bits (71), Expect = 0.88 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +1 Query: 340 VIHNLPIIAKMAAVSKASGRFGLLQGTSAETS---GGLLICLPREQAARFCSEIKSSKYG 396 ++ NLP+ A+ G L G++AE S GG+ +CL +++ R + SK G Sbjct: 123724 LVLNLPLAEVGASFVACGSALGELVGSAAELSVSLGGIGLCLSQQRFRRSANRFSVSKLG 123903 Query: 397 EGHQAWIVGIVEK 409 + GI E+ Sbjct: 123904 SCGLFCLCGICER 123942 >gb|GL349454.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.22, whole genome shotgun sequence Length = 456871 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 82 RPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDS 121 RP +G G + A + PAGA P+ FPA G G S Sbjct: 276043 RPVVGGGETARAQGARRGGPAPAGAQPTACFPAFGAGARS 275924 >gb|GL349490.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.58, whole genome shotgun sequence Length = 226779 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -2 Query: 340 VIHNLPIIAKMAAVSKASGRFGLLQGTSAETSGGL-LICLPREQAARFCSEIKSSKYGEG 398 V+H LPI A +AVS + R + S T+ L+ LP Q R ++ ++ G Sbjct: 126920 VVHRLPIAAAASAVSPTTRRAAAVPAASIPTTATTRLLLLPPRQLRRAVVPVRQVRHAPG 126741 Query: 399 HQ 400 + Sbjct: 126740 RR 126735 >gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.1, whole genome shotgun sequence Length = 716227 Score = 30.0 bits (66), Expect = 3.3 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Frame = +3 Query: 62 CKVPQEALLKLLAGL--------TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113 C++ A K L GL T P++RP + A + P +GPSP+ P Sbjct: 8706 CRLRMTASTKPLHGLWTTSLHQVTSPELRPEMSLPRTASLPPARSASSAPLRSGPSPSRP 8885 Query: 114 ALGIGMDSCVIPLR 127 S +P R Sbjct: 8886 LASTRATSVPLPFR 8927 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -2 Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113 +R D RPP GR + A AG PAGAG P P Sbjct: 475248 SRHDRRPPAGRR*GRRRAPAPGAAGRPAGAGRQPARP 475138 >gb|GL349494.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.62, whole genome shotgun sequence Length = 213085 Score = 29.6 bits (65), Expect = 4.4 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = -3 Query: 36 RPFEPQALGLSPSWRLTGFSGMKGU-GCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQE 94 R P AL + + TG G +G G P++ + G + G G G E Sbjct: 107837 RALRPHALPGAVATTATGSGGGRGGRGKSTPKQQGSSVAGGAIAKESDTHAGTGTQAGTE 107658 Query: 95 -EASQEAGLPAGAGPSPTFPALGIGMDS 121 A + AGL AGAG T A G G S Sbjct: 107657 ASAGESAGLSAGAG--RTTAAAGTGTAS 107580 >gb|GL349468.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.36, whole genome shotgun sequence Length = 367059 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 91 GGQEEASQEAGLPAGAGPSPTFPALGIGM 119 GG+ E + G G GP P FPA+G G+ Sbjct: 166980 GGEGEGRGKRGGGGGDGPRPLFPAVGQGL 167066 >gb|GL349482.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.50, whole genome shotgun sequence Length = 300393 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = -1 Query: 61 GCKVPQEALLKLLAGLTRP-DVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGM 119 GC +P + ++L+ L+R + G+G ++E +E+ P P P L + + Sbjct: 124791 GCSLPSTSCMRLVGDLSRSIGCKGREGKGTTTREDERGRESTCLRSPPPPPPPPPLLLLL 124612 Query: 120 DSCVIPLRHGGLSLVQTTDFFY 141 + P+ + S+++T +Y Sbjct: 124611 LPALPPVIYTFSSIMETKQLYY 124546 >gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.4, whole genome shotgun sequence Length = 664084 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 75 GLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113 GL RP RP R GQEE++ A A P PT P Sbjct: 165404 GLRRP-ARPRSSRACASGQEESTAALAQHARATPPPTAP 165517 >gb|GL349458.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.26, whole genome shotgun sequence Length = 436025 Score = 28.9 bits (63), Expect = 7.4 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -2 Query: 64 VPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPAL 115 VP+ + + + P P+G G G ++ + P A PSP++PA+ Sbjct: 154870 VPEASTVAARVDVVLPHDPSPVGTGQHGSRDTHHRRHSRPLSAEPSPSWPAV 154715 >gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.19, whole genome shotgun sequence Length = 517691 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Frame = +1 Query: 82 RPPLGRGLVGGQEEA-----SQEAGLPAGAGPSPTFPA 114 RP GRGL G A S +AG PAG GP PA Sbjct: 305698 RPAAGRGLAGCSLGAV*GRGSAQAGGPAGVGPGCARPA 305811 >gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.11, whole genome shotgun sequence Length = 571036 Score = 28.9 bits (63), Expect = 7.4 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 78 RPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALG 116 RP V+P G G E A G P P+PT+P +G Sbjct: 460249 RPMVKPERAEGAEGA-EGADDGLGFPPPPTPTPTYPLVG 460362 >gb|GL349476.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.44, whole genome shotgun sequence Length = 310991 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +1 Query: 85 LGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSL 133 +G ++GG+EEA + GL G G L G+D + R G L Sbjct: 136162 VGDIVLGGKEEARERVGLGQGVGVEQATSRLDRGVDRKPLEARRGNRRL 136308 >gb|GL349464.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.32, whole genome shotgun sequence Length = 401146 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 354 SKASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEG 398 ++A+G G ++AE +GG+ I + R AAR CS +++ G G Sbjct: 324821 ARAAGGAGSGGSSAAERAGGICIWVRRVPAARLCSR-RAADAGRG 324952 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.320 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,760,350 Number of Sequences: 131 Number of extensions: 298029 Number of successful extensions: 2150 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 1941 Number of HSP's gapped (non-prelim): 787 length of query: 448 length of database: 9,560,209 effective HSP length: 103 effective length of query: 345 effective length of database: 9,546,716 effective search space: 3293617020 effective search space used: 3293617020 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)