TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Anopheles gambiae # Complete (369 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 239 3e-63 gb|GL349486.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 34 0.18 gb|GL349453.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 0.68 gb|GL349458.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 2.6 gb|GL349461.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.4 gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.4 gb|GL349447.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.4 gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 4.4 gb|GL349459.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 4.4 gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 4.4 gb|GL349469.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 5.8 gb|GL349445.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 28 9.8 >gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.3, whole genome shotgun sequence Length = 673526 Score = 239 bits (609), Expect = 3e-63 Identities = 132/309 (42%), Positives = 187/309 (60%), Gaps = 7/309 (2%) Frame = -3 Query: 53 PNKEEGVGIGLDSSVIALKHD-LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGAT 111 P + IGLD S+I + + +Q+ D+FYPL++DP+ G+IA ANV+SD+FA+G + Sbjct: 663846 PPAIDNEAIGLDCSIIPTAIEGVVTIQTTDYFYPLVEDPYQQGRIACANVLSDLFAMGIS 663667 Query: 112 EIDQIKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAAS 171 D + +I+ A E + +R +V +++GF + A V G NPW +IGG AS Sbjct: 663666 RCDTMLMILAASLEMPKDQRMIVTRELIRGFNDLATEAGTSVTGGQTVLNPWPIIGGVAS 663487 Query: 172 AVC-HRSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGE----QQSDSWAQLRERFTV 226 AV I P++ PGD +VLTKP+GTQ+A NAY W+G+ ++ +W + + + Sbjct: 663486 AVVPSDGGYIDPFSLVPGDVMVLTKPIGTQVAVNAYQWLGDHEAGKEGSNWDLIADVLSP 663307 Query: 227 ADIEQTYRIALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHL 286 A + +A SM+RLNK+GA LM K+GAH ATDVTGFGL GHA NLA HQ A V + Sbjct: 663306 AQARVAFALASASMARLNKSGAALMVKHGAHGATDVTGFGLLGHARNLAEHQKAAVHISI 663127 Query: 287 DTLPIIKNVREIAETLGRGAKLLAGKAVETSGGLLICLP-REAAAGFCEEYRRCTKHEAW 345 TLP+I+N+ + + KLL G + ETSGGLL+ LP +AAA FC + AW Sbjct: 663126 HTLPVIENMPAVNDKF--NFKLLDGWSSETSGGLLVALPSADAAAAFCADIEAEDGWPAW 662953 Query: 346 IVGHVEKGA 354 IVG V G+ Sbjct: 662952 IVGSVSAGS 662926 Score = 33.5 bits (75), Expect = 0.23 Identities = 21/74 (28%), Positives = 37/74 (50%) Frame = +1 Query: 167 GGAASAVCHRSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTV 226 G ++S SE+I PY QPG+ + L + + T++ + + + SW Q V Sbjct: 304051 GSSSSLTSSSSEVIEPYQPQPGEDMELVRMIETEI-------LSTRPNVSWDQ------V 304191 Query: 227 ADIEQTYRIALESM 240 AD+E R+ E++ Sbjct: 304192 ADLEDAKRLLEEAV 304233 >gb|GL349486.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.54, whole genome shotgun sequence Length = 279941 Score = 33.9 bits (76), Expect = 0.18 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 11/108 (10%) Frame = -1 Query: 167 GGAASAVCHRSELIMPYNAQPGDALVLTKP------LGTQLATNAYIWMGEQ-----QSD 215 GG+ +AV R E + P A +++KP LG + + +W G + ++ Sbjct: 257312 GGSRAAVVQRPETLSVRE*VPAQARIVSKPENSPYCLGAKRRRSDLVWSGRRVSLRAETA 257133 Query: 216 SWAQLRERFTVADIEQTYRIALESMSRLNKTGAELMKKYGAHAATDVT 263 WA L + TVA + + SMSR G K A A+D T Sbjct: 257132 KWASL-PKATVAGSSSLVFLTVNSMSRCELMGHGPN*KMVAEKASDGT 256992 >gb|GL349453.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.21, whole genome shotgun sequence Length = 472482 Score = 32.0 bits (71), Expect = 0.68 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = +3 Query: 318 GGLLICLPREAAAG--FCE--EYRRCTKHEAWIVGHVEKGAR 355 GG C P A +G C+ +RRCT+ W GH++ AR Sbjct: 66447 GGACYCRPASAGSGGELCKGWAFRRCTQRGYWHTGHLQDEAR 66572 >gb|GL349458.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.26, whole genome shotgun sequence Length = 436025 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 22 RGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGIG 62 RG G++ P+ L L AGV G +G GK G+G Sbjct: 376149 RGQGAEAPEPALAPLAAGVVGGAVGGDAGKAAVARRVTGVG 376027 >gb|GL349461.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.29, whole genome shotgun sequence Length = 406166 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = -3 Query: 34 NRLLAGVYGEQ-LGDKDGKGPNKEEGVGIGLDSSVIA 69 NR+L + GE L D+ +GP+ E+GVG+G V+A Sbjct: 28935 NRILDYLAGESCLLDRAERGPSGEKGVGLGRSRRVVA 28825 >gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.19, whole genome shotgun sequence Length = 517691 Score = 29.6 bits (65), Expect = 3.4 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +1 Query: 295 VREIAETLGRGAKLLAGKAVETSGGLLI-CLPREAAAGFCEEYRR 338 + ++A+ L AKLL + TSGGL++ CL EA G RR Sbjct: 298417 IDKVADVLRETAKLLVDGSGVTSGGLVLDCLHTEAELGSSSRTRR 298551 >gb|GL349447.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.15, whole genome shotgun sequence Length = 583276 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +2 Query: 320 LLICLPREAAAGFCEEYRRCTKHEAWIVGHVEKGARGVK 358 +++C PR G+C RRCT+ +W G G + Sbjct: 519935 IVVCCPRWL--GWCPSRRRCTRRTSWCGARASGGTAGCR 520045 >gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.33, whole genome shotgun sequence Length = 407772 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = -2 Query: 317 SGGLLICLPREAAAGFCEEYRRCTKHEAWI 346 S GLL C R AAAG+ +RR T H WI Sbjct: 302552 SAGLLACGLRPAAAGYF--HRRPTHHSPWI 302469 >gb|GL349459.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.27, whole genome shotgun sequence Length = 436348 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -1 Query: 298 IAETLGRGAKLLAGKAVETSGGLLI-CLPREAAAGFCEEYRRCTKHEAWIVG 348 + +G GA ET+GGL+ C P E AGF + RR H G Sbjct: 299488 VTAQVGLGAAAWVVDQTETAGGLVAHCHPSEVFAGFPGDVRRGLAHAVHAAG 299333 Score = 28.1 bits (61), Expect = 9.8 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -3 Query: 22 RGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGIG 62 RG V D RL G+ G+++ KG EEG+G+G Sbjct: 404993 RGGFLVVVDDDPLRLTGDDVGDDDGEEEDKGDESEEGLGVG 404871 >gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.5, whole genome shotgun sequence Length = 654703 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = -2 Query: 243 LNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVD-------FHLDTLPIIKNV 295 L G + + AAT +TG+ L A+ LAS A +D F D P + Sbjct: 282198 LGGLGLLAIASWAGLAATSLTGYSLVRAAQGLASGGLAIIDLAVVDDMFPPDACPRKHGL 282019 Query: 296 REIAETLGRGAKLLAGKAV 314 + +GR L+AG A+ Sbjct: 282018 ADSGSLVGRCVGLVAGAAL 281962 >gb|GL349469.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.37, whole genome shotgun sequence Length = 357088 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/54 (38%), Positives = 25/54 (46%) Frame = -1 Query: 296 REIAETLGRGAKLLAGKAVETSGGLLICLPREAAAGFCEEYRRCTKHEAWIVGH 349 RE + G GA+ G A GGL LPRE G C+ RC E + GH Sbjct: 176758 REATKWKGDGAE---GFARGGGGGLAAVLPREGKEGKCDV--RCVGDERELGGH 176612 >gb|GL349445.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.13, whole genome shotgun sequence Length = 561051 Score = 28.1 bits (61), Expect = 9.8 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 9/130 (6%) Frame = +2 Query: 133 VVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCHRSELIMPYNAQPGDALV 192 +VVPM ++ +L + + AE+PW +G SA C L+ Sbjct: 243377 IVVPMWLEPWLGGIASAAKAHAVTFYAEHPWMALG--CSAAC----------------LL 243502 Query: 193 LTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQ---------TYRIALESMSRL 243 P+ LA A +W QQ+ L F V+ ++Q R + S++RL Sbjct: 243503 FAFPILPPLAVIAVMWWVAQQT-----LAVVFVVSVLQQGTVIIRDVARVRSTIRSLTRL 243667 Query: 244 NKTGAELMKK 253 K +++ Sbjct: 243668 GKATKSAVRR 243697 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.319 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,342,058 Number of Sequences: 131 Number of extensions: 201942 Number of successful extensions: 1455 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1361 Number of HSP's gapped (non-prelim): 341 length of query: 369 length of database: 9,560,209 effective HSP length: 101 effective length of query: 268 effective length of database: 9,546,978 effective search space: 2558590104 effective search space used: 2558590104 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)