TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000032_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Homo sapiens # Complete
         (392 letters)

Database: P.ultimum/genome.fa 
           82 sequences; 42,801,618 total letters

Searching.................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaff...   189   4e-92
gb|GL376558.1| Pythium ultimum DAOM BR144 unplaced genomic scaff...    32   0.84 
gb|GL376636.1| Pythium ultimum DAOM BR144 unplaced genomic scaff...    30   4.2  
gb|GL376589.1| Pythium ultimum DAOM BR144 unplaced genomic scaff...    29   7.1  

>gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582037,
              whole genome shotgun sequence
          Length = 1414051

 Score =  189 bits (481), Expect(2) = 4e-92
 Identities = 95/193 (49%), Positives = 129/193 (66%)
 Frame = +3

Query: 183    NEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMM 242
              +E I P NA  GDV++LTK LGTQVAV + QW   PE+W ++  VVT +D E  +  A  
Sbjct: 791511 SEIIRPVNAQVGDVIILTKALGTQVAVNLFQWRKRPERWQRVADVVTVQDAEHGFAMASE 791690

Query: 243    NMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAV 302
              +M+RLN  AA LMH + AH+ATD+TGFGIL HA+N AK Q  +V+F IH LP++  M  V
Sbjct: 791691 SMSRLNLNAARLMHKYGAHSATDVTGFGILAHARNQAKSQTRDVNFEIHTLPIIQHMVKV 791870

Query: 303    SKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNR 362
              ++  GN F L+ G   ETSGGLL+CLP E A  + AE+++    +G  AW++G V  G++
Sbjct: 791871 NETIGNSFRLLEGFAAETSGGLLLCLPAEHADAYIAELRAL---DGKPAWVVGRVVAGSK 792041

Query: 363    TARIIDKPRIIEV 375
               ARI+  P I+EV
Sbjct: 792042 DARIVANPTILEV 792080



 Score =  168 bits (425), Expect(2) = 4e-92
 Identities = 87/174 (50%), Positives = 116/174 (66%), Gaps = 1/174 (0%)
 Frame = +2

Query: 7      FNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGI 66
              F+P    LD SF LT F+ LKG GCK+PQ  L   LE +  +           + P    
Sbjct: 790916 FDPVDLGLDPSFTLTDFSALKGCGCKLPQAKLLGYLEDIAND-----------LKPNETP 791062

Query: 67     GMDTCVIPLRHG-GLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLML 125
              GMD+ V+ + HG  L ++ TTD+ +P V+DPY+ G+IACANVLSD+YAMGVTE D MLM+
Sbjct: 791063 GMDSSVVKISHGKDLYMISTTDFFFPSVEDPYVQGKIACANVLSDVYAMGVTEVDTMLMI 791242

Query: 126    LGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTV 179
              LGV   M+++ERD V   +I+GF D A +A T+VTGGQTV+NPW ++GGVA +V
Sbjct: 791243 LGVCRDMSEKERDVVTTQMIRGFNDLARKAETNVTGGQTVMNPWPIVGGVAMSV 791404


>gb|GL376558.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581239,
              whole genome shotgun sequence
          Length = 719819

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = -2

Query: 227    VVTQEDVELAYQEAMMNMARLNRTAAGLM--HTFNAHAATDITGFGILGHAQNLAKQQRN 284
              VV +ED+E   Q  + ++    R A  L   H   AH+  D   F  L H   +    R+
Sbjct: 474853 VVDREDLEQVRQ-VVDHLTEDIRVARELEQPHREIAHSLDDFDHFAALAHRVGIVLDNRD 474677

Query: 285    EVSFVIHNLPVLAKMAAVS 303
              E   V+H LPV+A+   ++
Sbjct: 474676 EQLLVLHVLPVVAQTLLIA 474620


>gb|GL376636.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582039,
               whole genome shotgun sequence
          Length = 1829366

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = -3

Query: 278     LAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARF 336
               LA  QRN ++ + H     + MAA +KA GN+F ++   CP  + G+   + R+  ++F
Sbjct: 1182567 LAPSQRNVLAPLSHKQKPRSSMAASTKAIGNVFQVL---CPTRNYGVGTRVTRKIWSKF 1182400


>gb|GL376589.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581863,
              whole genome shotgun sequence
          Length = 154147

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 358    EKGNRTARIIDKPRIIEVAP-QVATQNVNPT 387
              +KG  T RI  KPR IE  P +VA Q   P+
Sbjct: 137875 QKGQETKRICAKPRFIEQIPDEVAAQEATPS 137967


  Database: P.ultimum/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 42,801,618
  Number of sequences in database:  82
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,378,065
Number of Sequences: 82
Number of extensions: 295049
Number of successful extensions: 1189
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1110
Number of HSP's gapped (non-prelim): 191
length of query: 392
length of database: 14,267,206
effective HSP length: 104
effective length of query: 288
effective length of database: 14,258,678
effective search space: 4106499264
effective search space used: 4106499264
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)