TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: H.arabidopsidis/genome.fa 
           5422 sequences; 67,459,135 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABWE01000811.1| Hyaloperonospora parasitica strain Emoy2 v-7....   125   5e-71
gb|ABWE01000256.1| Hyaloperonospora parasitica strain Emoy2 v-7....    31   2.6  
gb|ABWE01000359.1| Hyaloperonospora parasitica strain Emoy2 v-7....    31   3.4  
gb|ABWE01000060.1| Hyaloperonospora parasitica strain Emoy2 v-7....    30   5.8  

>gb|ABWE01000811.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont82.8, whole genome
             shotgun sequence
          Length = 27083

 Score =  125 bits (314), Expect(3) = 5e-71
 Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2     FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNK-EEGVG 60
             F P S GL  DF LT FS L+G G K+PQ  L           LG  D   PN  +    
Sbjct: 12371 FDPLSLGLEEDFVLTNFSALKGCGCKLPQAKL-----------LGYLDNVMPNDVKPNET 12517

Query: 61    IGLDSSVIALKHD--LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQIKL 118
              G+DSSV+ + H   L+LV + DFF+P ++DP++ G+IA ANV+SDV+A+G TE+D + +
Sbjct: 12518 PGMDSSVVKISHGSGLYLVSTTDFFFPSVEDPYVQGQIACANVLSDVYAMGVTEVDTMLM 12697

Query: 119   IVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAV 173
             I+    + TE++R+VV   +++GF + A+     V  G    NPW ++GG A +V
Sbjct: 12698 ILGVCRDMTEKQRDVVTTEMIRGFNDLARQAQTNVTGGQTVMNPWPIVGGVAMSV 12862



 Score =  117 bits (293), Expect(3) = 5e-71
 Identities = 61/115 (53%), Positives = 73/115 (63%)
 Frame = +1

Query: 254   YGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKA 313
             +GAH+ATDVTGFGL  HA N A  Q  DV F L TLPIIKN+ ++ E +G   KLL G A
Sbjct: 13285 HGAHSATDVTGFGLLAHARNQAKSQLEDVSFELHTLPIIKNMVKVNEVIGNSFKLLDGFA 13464

Query: 314   VETSGGLLICLPREAAAGFCEEYRRCTKHEAWIVGHVEKGARGVKMNPNLNILSV 368
              ETSGGLL+CLP E A  F +E R   +  AWIVG V  G +   + PN  I+ V
Sbjct: 13465 AETSGGLLLCLPAENAEAFIKELRELDEKPAWIVGRVIAGLKDACIVPNPTIVEV 13629



 Score = 66.2 bits (160), Expect(3) = 5e-71
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = +3

Query: 178   ELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRIAL 237
             ++I P NA  GD ++LTKPLGTQ+A N + W  +++ + W ++ +  T  D +  +++A 
Sbjct: 12972 QIIRPENAVVGDVIILTKPLGTQVAVNVFQW--KKKPEQWQRVNQVVTPHDADVAFQMAS 13145

Query: 238   ESMSRLNKTGAELMKKYG 255
             ESM RLN   A++M K G
Sbjct: 13146 ESMGRLNLNAAKMMHKVG 13199


>gb|ABWE01000256.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont81.9, whole genome
             shotgun sequence
          Length = 56135

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 277   HQTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKAVETSGG 319
             H   D  F +D +PIIK++REI+E   R  +++   + +   G
Sbjct: 11838 HHETDPFFEIDDVPIIKDLREISEQDSRAGQIVTKTSQQMVNG 11710


>gb|ABWE01000359.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont12.15, whole
             genome shotgun sequence
          Length = 47611

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 20/91 (21%), Positives = 43/91 (47%)
 Frame = +2

Query: 273   NLASHQTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKAVETSGGLLICLPREAAAGF 332
             +++S+    + +  D LPI+++ R    T G+   L   ++++ S  L  CLPR     +
Sbjct: 17717 DVSSNGDGTLTYEYDDLPILESSRTSCCTPGKPVVLAMSRSIDRSDRLSDCLPRGELHVW 17896

Query: 333   CEEYRRCTKHEAWIVGHVEKGARGVKMNPNL 363
                Y  C   ++  +G +     G+++  +L
Sbjct: 17897 V--YEACRLLDSRAIGDMTLVKHGIRVRCDL 17983


>gb|ABWE01000060.1| Hyaloperonospora parasitica strain Emoy2 v-7.0.1_Cont27.1, whole genome
             shotgun sequence
          Length = 96542

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 314   VETSGGLLICLPREAAAGFCEEYRRCTKHEAWIVGHVEKGAR 355
             +ET GG L+C PR   AG C          A   GH+++  R
Sbjct: 82445 METHGGCLLCEPRWQRAGRCTRIGHGGASNAKAAGHIDQ*GR 82570


  Database: H.arabidopsidis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 67,459,135
  Number of sequences in database:  5422
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,387,269
Number of Sequences: 5422
Number of extensions: 340056
Number of successful extensions: 1279
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 975
Number of HSP's gapped (non-prelim): 447
length of query: 369
length of database: 22,486,378
effective HSP length: 107
effective length of query: 262
effective length of database: 21,906,224
effective search space: 5739430688
effective search space used: 5739430688
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)