TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000044_1.0 # Protein # Selenoprotein K1 (SelK1) # Drosophila melanogaster # Complete (110 letters) Database: C.owczarzaki/genome.fa 89 sequences; 28,043,798 total letters Searching........................................................................................done Score E Sequences producing significant alignments: (bits) Value supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 29 0.42 supercontig_1.13 of Capsaspora owczarzaki ATCC 30864 27 1.6 supercontig_1.6 of Capsaspora owczarzaki ATCC 30864 26 3.6 supercontig_1.3 of Capsaspora owczarzaki ATCC 30864 26 3.6 supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 26 3.6 supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 26 4.6 supercontig_1.5 of Capsaspora owczarzaki ATCC 30864 26 4.6 supercontig_1.11 of Capsaspora owczarzaki ATCC 30864 25 7.9 supercontig_1.4 of Capsaspora owczarzaki ATCC 30864 25 7.9 >supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 Length = 1512001 Score = 29.3 bits (64), Expect = 0.42 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -1 Query: 4 IDHNGRVWEKRPWDWRRIVELFV 26 + H G +W + W+W RI+ LF+ Sbjct: 903517 VKHRGIMWSSQYWNWSRILGLFL 903449 >supercontig_1.13 of Capsaspora owczarzaki ATCC 30864 Length = 955311 Score = 27.3 bits (59), Expect = 1.6 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 7/34 (20%) Frame = -2 Query: 7 NGRVWEKRP-------WDWRRIVELFVGIWFAIK 33 NGR W+++P W R+ E V IW+++K Sbjct: 674087 NGRNWKRKPGRHRPK*MTWCRMSEPQVAIWYSVK 673986 >supercontig_1.6 of Capsaspora owczarzaki ATCC 30864 Length = 1617845 Score = 26.2 bits (56), Expect = 3.6 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 11 WEKRPWDWRRIVELFVGIWFAIK 33 WE R + W V L VG W +++ Sbjct: 372623 WEPRMFGWMSRVRLLVGWWMSVR 372691 Score = 25.4 bits (54), Expect = 6.1 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +1 Query: 88 PNRRIGRIQPTMSCNMPAGGGUG 110 P RR+ RI M+ P GGG G Sbjct: 1582135 PGRRVSRIAVCMAIVPPPGGGGG 1582203 >supercontig_1.3 of Capsaspora owczarzaki ATCC 30864 Length = 2526540 Score = 26.2 bits (56), Expect = 3.6 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Frame = -2 Query: 2 VYIDHNG---RVWEKRPWDWRRI 21 V +D NG R+W RP WRR+ Sbjct: 336431 VRLDQNGSARRIWSLRPARWRRV 336363 Score = 25.8 bits (55), Expect = 4.6 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -3 Query: 86 LRPNRRIGRIQPTMSCNMPAGGG 108 L P+RR R+QPT PA GG Sbjct: 1359565 LSPHRRCRRLQPTALHRSPAVGG 1359497 Score = 25.4 bits (54), Expect = 6.1 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 Query: 9 RVWEKRPWDWRRIV 22 RV +RPW WRR+V Sbjct: 165472 RVHVRRPWLWRRVV 165513 >supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 Length = 3794667 Score = 26.2 bits (56), Expect = 3.6 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = +3 Query: 12 EKRPWDWRRIVEL 24 EK+PW WR++V + Sbjct: 2990844 EKKPWSWRKVVRV 2990882 Score = 25.0 bits (53), Expect = 7.9 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = -2 Query: 6 HNGRVWEKRPWDWRR 20 H+ W+ PW WRR Sbjct: 104315 HHLDTWQSAPWTWRR 104271 >supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 Length = 1544042 Score = 25.8 bits (55), Expect = 4.6 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 87 RPNRRIGRIQPTMSCNMPAGG 107 +P+ R RI+PT S P GG Sbjct: 208748 KPSARSSRIRPTQSSRRPCGG 208686 >supercontig_1.5 of Capsaspora owczarzaki ATCC 30864 Length = 1755934 Score = 25.8 bits (55), Expect = 4.6 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 6 HNGRVWEKRPWDWR 19 H GR W++RPW R Sbjct: 1693162 HGGRQWQQRPWGRR 1693121 >supercontig_1.11 of Capsaspora owczarzaki ATCC 30864 Length = 1292811 Score = 25.0 bits (53), Expect = 7.9 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -2 Query: 13 KRPWDWRRIVELFVGI---WFAIKQL 35 KR WDW+R+ G W A+K+L Sbjct: 832292 KRQWDWQRLAGEMRGFRPRWCAMKKL 832215 >supercontig_1.4 of Capsaspora owczarzaki ATCC 30864 Length = 2141673 Score = 25.0 bits (53), Expect = 7.9 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 86 LRPNRRIGRIQPTMSCNMPAGGG 108 LRP R + P SC++P G G Sbjct: 1991743 LRPRRFVCSSTPPTSCSVPTGAG 1991675 Database: C.owczarzaki/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,043,798 Number of sequences in database: 89 Lambda K H 0.328 0.144 0.508 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,608,569 Number of Sequences: 89 Number of extensions: 36419 Number of successful extensions: 521 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 412 Number of HSP's gapped (non-prelim): 299 length of query: 110 length of database: 9,347,932 effective HSP length: 84 effective length of query: 26 effective length of database: 9,340,456 effective search space: 242851856 effective search space used: 242851856 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 52 (24.6 bits)