TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000053_1.0 # Protein # Selenoprotein K1 (SelK1) #
Anopheles gambiae # Complete
         (96 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.11 of Capsaspora owczarzaki ATCC 30864                   27   2.6  
supercontig_1.14 of Capsaspora owczarzaki ATCC 30864                   26   4.5  
supercontig_1.15 of Capsaspora owczarzaki ATCC 30864                   25   5.8  
supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                    25   9.9  

>supercontig_1.11 of Capsaspora owczarzaki ATCC 30864
          Length = 1292811

 Score = 26.6 bits (57), Expect = 2.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 10     VQEAQPWGVDRIKGLIMGFFNFLVMFFR 37
              +Q   P G DR+  L+  FF F   FF+
Sbjct: 329091 MQSGLPHGFDRLLDLVFFFFLFFAFFFK 329174



 Score = 25.0 bits (53), Expect = 7.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 21     IKGLIMGFFNFLVMFFRT 38
              IKG ++G F FLV+ F+T
Sbjct: 398853 IKGKVLGGFFFLVLIFKT 398800


>supercontig_1.14 of Capsaspora owczarzaki ATCC 30864
          Length = 919646

 Score = 25.8 bits (55), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 4      ISRNGAVQEAQPWGVDRIKGL 24
              +SRN  ++ AQPW ++R   L
Sbjct: 196394 VSRNAFIRAAQPWHINRCSDL 196332


>supercontig_1.15 of Capsaspora owczarzaki ATCC 30864
          Length = 930169

 Score = 25.4 bits (54), Expect = 5.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 8      GAVQEAQPWGVDRIKGLIMGFF 29
              GA+ ++QP G+D + G  + FF
Sbjct: 160249 GAIFQSQPSGIDAVDGARLAFF 160184


>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score = 24.6 bits (52), Expect = 9.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 4       ISRNGAVQEAQPWGVDRIKGLIMGFFNFLVMFFRTMLD 41
               ++ NG    A  W  D + GL+   F+F V F+R  L+
Sbjct: 3649172 LALNGGFSRAFLWLRDLLWGLMEWGFSFKVAFYRMELE 3649059


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.332    0.146    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,485,524
Number of Sequences: 89
Number of extensions: 5928
Number of successful extensions: 100
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91
Number of HSP's gapped (non-prelim): 17
length of query: 96
length of database: 9,347,932
effective HSP length: 71
effective length of query: 25
effective length of database: 9,341,613
effective search space: 233540325
effective search space used: 233540325
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 52 (24.6 bits)