TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Homo sapiens # Complete (448 letters) Database: C.owczarzaki/genome.fa 89 sequences; 28,043,798 total letters Searching........................................................................................done Score E Sequences producing significant alignments: (bits) Value supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 228 8e-62 supercontig_1.14 of Capsaspora owczarzaki ATCC 30864 32 1.1 supercontig_1.5 of Capsaspora owczarzaki ATCC 30864 29 5.6 supercontig_1.4 of Capsaspora owczarzaki ATCC 30864 29 5.6 supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 29 7.3 >supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 Length = 3794667 Score = 228 bits (582), Expect(2) = 8e-62 Identities = 134/298 (44%), Positives = 172/298 (57%), Gaps = 38/298 (12%) Frame = -2 Query: 151 GRIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXXX 210 GRIACANVLSDLYAMG++ECDN VTPL++KGF D Sbjct: 1155365 GRIACANVLSDLYAMGVSECDNMLMLLGVSTTLTPEESVIVTPLVMKGFHDLCQEAGTNV 1155186 Query: 211 XXXXXXXNPWIIIGGVATVVCQPNEFIMP----------------------------DSA 242 NPW ++GGVAT V +E IMP D A Sbjct: 1155185 LGGQTVKNPWFLLGGVATSVVGRHEMIMPGTRDNRASSCIFGHALSADLL*HSLDFTDGA 1155006 Query: 243 VVGDVLVLTKPLGTQVAVNAHQW-LDNPERWNKVKMVVSREEVELAYQEAMFNMATLNRT 301 GDVLVLTKPLG Q+AVNAHQW L +PER+ ++ V++ E+V AY+ A+ NM L+R Sbjct: 1155005 KSGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRV 1154826 Query: 302 AAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFG 361 AA LM F AHAATD+TGFGILGH++NLA+ Q++ V+F I P++ M A+ +A+ F Sbjct: 1154825 AARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERATPVFH 1154646 Query: 362 LLQGTSAETSGGLLICL---------PREQAARFCSEIKSSKYGEGHQAWIVGIVEKG 410 LL+GTSAETSGGLLI L R A R+C E+ ++ G QA+I+G V +G Sbjct: 1154645 LLEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDEL--ARQDRGFQAYIIGRVVEG 1154478 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 8/121 (6%) Frame = -2 Query: 26 LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPL 85 +T GR + F P+ LGL WRLT F+ +KG GCKVPQ+ LLKLL R Sbjct: 1155983 VTFGR-----KRFNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVF-----RANS 1155834 Query: 86 GRGLVGGQEEASQEAGLPAGAG-PSPTFPA-------LGIGMDSCVIPLRHGGLSLVQTT 137 + G +++ + GA P+ + PA +G+G+DSCV RH GL LVQTT Sbjct: 1155833 NNAVAGSEQQIAAPTPTSGGAAVPASSIPAAITADGTIGVGLDSCVTETRHPGLYLVQTT 1155654 Query: 138 D 138 D Sbjct: 1155653 D 1155651 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -2 Query: 349 KMAAVSKASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYG 396 K K +GR GL + ++ T L C ++ A FC E +SSK+G Sbjct: 1085342 KSGRCKKQAGR-GLRKSSTCTTVHCLE*CFSMQRPAEFCVEFQSSKHG 1085202 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = -2 Query: 81 VRPPLGRGLVGGQEE 95 VR PLGRGLVGGQ E Sbjct: 903740 VRHPLGRGLVGGQPE 903696 Score = 28.5 bits (62), Expect = 9.5 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 94 EEASQEA---GLPAGAGPSPTFPALGIGMDSCVIPLRHGGLS 132 E A QE+ GLPA A P+P PA G G + + P G S Sbjct: 2836874 EHAKQESLKRGLPAEAPPTPATPADGEGSSAPLPPAPGGSAS 2836999 Score = 27.7 bits (60), Expect(2) = 8e-62 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Frame = -3 Query: 121 SCVIPLRHGGLSLVQTTDFFYPLVEDPYMM----GRIA 154 S ++ +G +T F+PL+EDPY M GR+A Sbjct: 1155562 SVLVSFWYGCWRFART*QSFFPLIEDPYQMVSARGRLA 1155449 >supercontig_1.14 of Capsaspora owczarzaki ATCC 30864 Length = 919646 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 378 LPREQAARFCSEIKSSKYGEGHQAW 402 LPR Q ++ C K + +G GHQAW Sbjct: 609784 LPRPQTSQLC*RRKRAHHGRGHQAW 609710 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 28 LGRSFSNYRPFEPQALGLSPSWRLTGFSG 56 L S S Y +A+ LSPSWR G+ G Sbjct: 554531 LAASLSKYSASLSRAIALSPSWRFGGYFG 554617 >supercontig_1.5 of Capsaspora owczarzaki ATCC 30864 Length = 1755934 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = -3 Query: 367 SAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEV- 425 S SG +L+ P AA + + S G GH+ W+ +A ++ R++ + Sbjct: 1645436 SRRHSGAVLLSAPAAAAAAALAWLSSPSTGSGHKIWLA--------SAFLVQYSRLVALR 1645281 Query: 426 LPRGATAAVLA 436 L G AAV++ Sbjct: 1645280 LKEGTAAAVIS 1645248 >supercontig_1.4 of Capsaspora owczarzaki ATCC 30864 Length = 2141673 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/49 (32%), Positives = 18/49 (36%) Frame = +2 Query: 65 PQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113 P A P RPP RGL G AS + P+ P P P Sbjct: 1667270 PTAAAASSAPAAATPQSRPPASRGLHGDAPAASPQPQHPSSRPPQPPAP 1667416 >supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 Length = 1512001 Score = 28.9 bits (63), Expect = 7.3 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -2 Query: 346 IIAKMAAVSKASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVG 405 ++++ AA + G Q A+T GLL L R QAA + + +W G Sbjct: 1128144 LVSRRAARYQCRGTRARHQSRHAQTIRGLLAQLGRAQAAALVAPLARHLASSARSSWSRG 1127965 Query: 406 IVEKGNRTAR 415 + +R+AR Sbjct: 1127964 SSRERHRSAR 1127935 Database: C.owczarzaki/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,043,798 Number of sequences in database: 89 Lambda K H 0.320 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,690,298 Number of Sequences: 89 Number of extensions: 217487 Number of successful extensions: 1215 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 1029 Number of HSP's gapped (non-prelim): 488 length of query: 448 length of database: 9,347,932 effective HSP length: 103 effective length of query: 345 effective length of database: 9,338,765 effective search space: 3221873925 effective search space used: 3221873925 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)