TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000032_1.0 # Protein # Selenophosphate synthetase 1 (SPS1) # Homo sapiens # Complete (392 letters) Database: C.owczarzaki/genome.fa 89 sequences; 28,043,798 total letters Searching........................................................................................done Score E Sequences producing significant alignments: (bits) Value supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 263 1e-70 supercontig_1.12 of Capsaspora owczarzaki ATCC 30864 34 0.15 supercontig_1.14 of Capsaspora owczarzaki ATCC 30864 31 1.6 supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 29 6.1 supercontig_1.6 of Capsaspora owczarzaki ATCC 30864 29 6.1 supercontig_1.16 of Capsaspora owczarzaki ATCC 30864 28 8.0 supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 28 8.0 >supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 Length = 3794667 Score = 263 bits (673), Expect = 1e-70 Identities = 154/299 (51%), Positives = 188/299 (62%), Gaps = 38/299 (12%) Frame = -2 Query: 100 GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSV 159 GRIACANVLSDLYAMGV+ECDNMLMLLGVS +T E V PL+++GF D +EAGT+V Sbjct: 1155365 GRIACANVLSDLYAMGVSECDNMLMLLGVSTTLTPEESVIVTPLVMKGFHDLCQEAGTNV 1155186 Query: 160 TGGQTVLNPWIVLGGVATTVCQPNEFIMP----------------------------DNA 191 GGQTV NPW +LGGVAT+V +E IMP D A Sbjct: 1155185 LGGQTVKNPWFLLGGVATSVVGRHEMIMPGTRDNRASSCIFGHALSADLL*HSLDFTDGA 1155006 Query: 192 VPGDVLVLTKPLGTQVAVAVHQW-LDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRT 250 GDVLVLTKPLG Q+AV HQW L PE++ ++ V+T E V AY+ A+ NM RL+R Sbjct: 1155005 KSGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRV 1154826 Query: 251 AAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMF 310 AA LM F AHAATD+TGFGILGHA+NLA+ Q++ V+F I PVL M A+ +A +F Sbjct: 1154825 AARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERAT-PVF 1154649 Query: 311 GLMHGTCPETSGGLLICL---------PREQAARFCAEIKSPKYGEGHQAWIIGIVEKG 360 L+ GT ETSGGLLI L R A R+C E+ + G QA+IIG V +G Sbjct: 1154648 HLLEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDEL--ARQDRGFQAYIIGRVVEG 1154478 Score = 73.6 bits (179), Expect = 2e-13 Identities = 45/107 (42%), Positives = 56/107 (52%), Gaps = 23/107 (21%) Frame = -2 Query: 4 RESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQ---ENHFQEDEQFLGAV 60 R+ FNPE+ L +RLT+FT+LKG GCKVPQ L KLLE + N EQ + A Sbjct: 1155971 RKRFNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVAGSEQQIAAP 1155792 Query: 61 MP--------------------RLGIGMDTCVIPLRHGGLSLVQTTD 87 P +G+G+D+CV RH GL LVQTTD Sbjct: 1155791 TPTSGGAAVPASSIPAAITADGTIGVGLDSCVTETRHPGLYLVQTTD 1155651 >supercontig_1.12 of Capsaspora owczarzaki ATCC 30864 Length = 1052152 Score = 34.3 bits (77), Expect = 0.15 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 3/165 (1%) Frame = +3 Query: 168 PWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLV 227 P+ +L +AT +P + + D+ P D L+LT TQ +V W P K +L+ Sbjct: 575082 PFTLLVKLATAKFEPID-VKLDSVSPRDALLLTTE--TQ---SVTPW---PISIVKTELI 575234 Query: 228 VTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVS 287 V V+ Q M+ R + H+ H D+TG+ + + Q+ + Sbjct: 575235 VVC*GVDANKQ--MVFFLRESTVQENAEHSCPLHLFADLTGYKGVAFGGRASSQRAHFPQ 575408 Query: 288 FVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLI---CLP 329 HN+ +L + S+ C FGL+ + S + CLP Sbjct: 575409 SRRHNVRILCPSSRQSQRCVYFFGLLQDSLAPVSVVAFVASGCLP 575543 >supercontig_1.14 of Capsaspora owczarzaki ATCC 30864 Length = 919646 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 328 LPREQAARFCAEIKSPKYGEGHQAW 352 LPR Q ++ C K +G GHQAW Sbjct: 609784 LPRPQTSQLC*RRKRAHHGRGHQAW 609710 >supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 Length = 1544042 Score = 28.9 bits (63), Expect = 6.1 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Frame = -2 Query: 35 QDVLQKLLESLQENHFQEDEQFL-----GAVMPRLGIGMD 69 Q Q LL+ LQENH Q+D L G ++PR I D Sbjct: 135019 QQQQQHLLQLLQENHQQQDSLLLNLLPAGLMVPRTAISPD 134900 >supercontig_1.6 of Capsaspora owczarzaki ATCC 30864 Length = 1617845 Score = 28.9 bits (63), Expect = 6.1 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = -2 Query: 26 LKGTGCKVPQDVLQKLLESLQENHFQEDEQFLG------AVMPRLGIGMDTCVIPLRHGG 79 L G + + V L + + N F + L A + GIG+ CV R Sbjct: 326662 LNGMAERRTRSVAGALSSTTKSNPFMRNMSILSISTTSLAAVSWRGIGLSRCVQTRRINA 326483 Query: 80 LSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNML 123 +V ++ +V Y + + +CA+ LSD+Y + +C+ L Sbjct: 326482 RQVVVVCGGLW*LVSRFYSL-QPSCASRLSDVYRISGCDCNRTL 326354 >supercontig_1.16 of Capsaspora owczarzaki ATCC 30864 Length = 797998 Score = 28.5 bits (62), Expect = 8.0 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +2 Query: 311 GLMHGTCPETSGGLLICLPREQA--ARFCAEIKSPKYGEGH-QAWIIGIVEKGNRTARII 367 G HG CP T+ + +P E+ A+++ P G QA ++ +E G R+A + Sbjct: 84047 GRWHGRCPSTTHVPVAVMPVEKGVLGLLLAQVQVPAVGHDRLQAVLVQPLEHGRRSALRV 84226 Query: 368 DKPRIIEVAPQV 379 + I+ + V Sbjct: 84227 TRGSILRLCHTV 84262 >supercontig_1.8 of Capsaspora owczarzaki ATCC 30864 Length = 1512001 Score = 28.5 bits (62), Expect = 8.0 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 20 LTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQF 56 LTRF+ T C + + + ESLQ NH+Q + F Sbjct: 384422 LTRFSSSSMTSCCLYEQNRRSQTESLQNNHWQACQDF 384532 Database: C.owczarzaki/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,043,798 Number of sequences in database: 89 Lambda K H 0.320 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,086,779 Number of Sequences: 89 Number of extensions: 205343 Number of successful extensions: 869 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 794 Number of HSP's gapped (non-prelim): 329 length of query: 392 length of database: 9,347,932 effective HSP length: 101 effective length of query: 291 effective length of database: 9,338,943 effective search space: 2717632413 effective search space used: 2717632413 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)