TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000047_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Drosophila melanogaster # Complete
         (398 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                   264   7e-71
supercontig_1.13 of Capsaspora owczarzaki ATCC 30864                   28   8.2  

>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score =  264 bits (675), Expect = 7e-71
 Identities = 149/297 (50%), Positives = 192/297 (64%), Gaps = 39/297 (13%)
 Frame = -2

Query: 122     GKIACANVLSDLYAMGVTDCDNMLMLLAVSTKMTEKERDVVIPLIMRGFKDSALEAGTTV 181
               G+IACANVLSDLYAMGV++CDNMLMLL VST +T +E  +V PL+M+GF D   EAGT V
Sbjct: 1155365 GRIACANVLSDLYAMGVSECDNMLMLLGVSTTLTPEESVIVTPLVMKGFHDLCQEAGTNV 1155186

Query: 182     TGGQSVVNPWCTIGGVASTICQPNEYIVP----------------------------DNA 213
                GGQ+V NPW  +GGVA+++   +E I+P                            D A
Sbjct: 1155185 LGGQTVKNPWFLLGGVATSVVGRHEMIMPGTRDNRASSCIFGHALSADLL*HSLDFTDGA 1155006

Query: 214     VVGDVLVLTKPLGTQVAVNAHQW-IDQPERWNRIKLVVSEEDVRKAYHRAMNSMARLNRV 272
                 GDVLVLTKPLG Q+AVNAHQW +  PER+ R+  V++ E V +AY  A+ +M RL+RV
Sbjct: 1155005 KSGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRV 1154826

Query: 273     AARLMHKYNAHGATDITGFGLLGHAQTLAAHQKKDVSFVIHNLPVIAKMAAVAKACGNMF 332
               AARLM ++ AH ATD+TGFG+LGHA+ LA  QK  V+F I   PV+  M A+ +A   +F
Sbjct: 1154825 AARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERAT-PVF 1154649

Query: 333     QLLQGHSAETSGGLLICL---------PREQAAAYCKDIEKQE-GYQAWIIGIVEKG 379
                LL+G SAETSGGLLI L          R  A  YC ++ +Q+ G+QA+IIG V +G
Sbjct: 1154648 HLLEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDELARQDRGFQAYIIGRVVEG 1154478



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
 Frame = -2

Query: 24      RRPFDPTAHDLDASFRLTRFADLKGRGCKVPQDVLSKLVSALQQD----YSAQDQE---- 75
               R+ F+P    L A +RLT+F  LKG GCKVPQ  L KL+   + +     +  +Q+    
Sbjct: 1155971 RKRFNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVAGSEQQIAAP 1155792

Query: 76      -PQFLNVAIP------------RIGIGLDCSVIPLRHGGLCLVQTTD 109
                P     A+P             IG+GLD  V   RH GL LVQTTD
Sbjct: 1155791 TPTSGGAAVPASSIPAAITADGTIGVGLDSCVTETRHPGLYLVQTTD 1155651


>supercontig_1.13 of Capsaspora owczarzaki ATCC 30864
          Length = 955311

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 26/121 (21%), Positives = 50/121 (41%)
 Frame = +1

Query: 28     DPTAHDLDASFRLTRFADLKGRGCKVPQDVLSKLVSALQQDYSAQDQEPQFLNVAIPRIG 87
              DP +    A+ R     + KG G  VP+D L +   A ++              A   + 
Sbjct: 187201 DPDSERCPAALR-----EEKGIGFVVPEDALDERKDAAERR-------------A*NPLE 187326

Query: 88     IGLDCSVIPLRHGGLCLVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGVTDCDNMLML 147
              +  +C+V+   +G   L QTT+  + + +    +     + +L D + + V D +   +L
Sbjct: 187327 VRGNCAVVAEANGADALDQTTESIFAVCEPDVSLSSQFSSGMLPDCFEVAVADDELAALL 187506

Query: 148    L 148
              L
Sbjct: 187507 L 187509


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.321    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,594,529
Number of Sequences: 89
Number of extensions: 215881
Number of successful extensions: 989
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 186
length of query: 398
length of database: 9,347,932
effective HSP length: 101
effective length of query: 297
effective length of database: 9,338,943
effective search space: 2773666071
effective search space used: 2773666071
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)