TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                   181   7e-46
supercontig_1.13 of Capsaspora owczarzaki ATCC 30864                   28   7.4  
supercontig_1.5 of Capsaspora owczarzaki ATCC 30864                    28   7.4  
supercontig_1.6 of Capsaspora owczarzaki ATCC 30864                    28   9.6  

>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score =  181 bits (459), Expect = 7e-46
 Identities = 110/301 (36%), Positives = 165/301 (54%), Gaps = 38/301 (12%)
 Frame = -2

Query: 91      FMLGKIALANVVSDVFAVGATEIDQIKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACN 150
               F+ G+IA ANV+SD++A+G +E D + +++   T  T +E  +V P+VM+GF +  +   
Sbjct: 1155374 FI*GRIACANVLSDLYAMGVSECDNMLMLLGVSTTLTPEESVIVTPLVMKGFHDLCQEAG 1155195

Query: 151     APVQIGSIAENPWCVIGGAASAVCHRSELIMPYN-------------------------- 184
                 V  G   +NPW ++GG A++V  R E+IMP                            
Sbjct: 1155194 TNVLGGQTVKNPWFLLGGVATSVVGRHEMIMPGTRDNRASSCIFGHALSADLL*HSLDFT 1155015

Query: 185     --AQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRIALESMSR 242
                 A+ GD LVLTKPLG QLA NA+ WM     + + +L    T   + + Y  A+ +M+R
Sbjct: 1155014 DGAKSGDVLVLTKPLGNQLAVNAHQWM-LTDPERYKRLDGVLTNEQVIEAYEHAITNMTR 1154838

Query: 243     LNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETL 302
               L++  A LM+++GAHAATDVTGFG+ GHA NLA  Q   V+F +D  P+++++  + E  
Sbjct: 1154837 LSRVAARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAM-ERA 1154661

Query: 303     GRGAKLLAGKAVETSGGLLICL---------PREAAAGFCEEYRRCTK-HEAWIVGHVEK 352
                    LL G + ETSGGLLI L          R  A  +C+E  R  +  +A+I+G V +
Sbjct: 1154660 TPVFHLLEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDELARQDRGFQAYIIGRVVE 1154481

Query: 353     G 353
               G
Sbjct: 1154480 G 1154478



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
 Frame = -2

Query: 2       FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGK-----GPNKE 56
               F PE+ GL  D+RLTKF+ L+G G KVPQ  L +LL            G       P   
Sbjct: 1155962 FNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVAGSEQQIAAPTPT 1155783

Query: 57      EG------------------VGIGLDSSVIALKH-DLFLVQSVD 81
                G                  +G+GLDS V   +H  L+LVQ+ D
Sbjct: 1155782 SGGAAVPASSIPAAITADGTIGVGLDSCVTETRHPGLYLVQTTD 1155651



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/66 (31%), Positives = 36/66 (54%)
 Frame = +3

Query: 219    QLRERFTVADIEQTYRIALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQ 278
              QLRE  +V  +E++Y +   + S+ + T  +L ++  AHAA+ V   G++   E     +
Sbjct: 575970 QLREE-SVRVLEESYMVLKATGSQSDTTYLQLFERRRAHAASVVLATGIHLIDEEHGDIR 576146

Query: 279    TADVDF 284
               A VDF
Sbjct: 576147 AAFVDF 576164


>supercontig_1.13 of Capsaspora owczarzaki ATCC 30864
          Length = 955311

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
 Frame = +1

Query: 247    GAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRGA 306
              G E + K GA       G  L    E    H+ ADV F    L I+     +A  +GRG 
Sbjct: 313396 GLEPLLKRGAVQRAGSRGSLL--RVERTRRHEPADVGFDRRLLGILGLGLLLASDVGRGQ 313569

Query: 307    KLL---AGKAVETSGGL 320
               +L    G  VE  GGL
Sbjct: 313570 HVLLLAGGGGVEAGGGL 313620


>supercontig_1.5 of Capsaspora owczarzaki ATCC 30864
          Length = 1755934

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 25/75 (33%), Positives = 41/75 (54%)
 Frame = +2

Query: 128    EQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCHRSELIMPYNAQP 187
              EQER+ VVPM   G L  A + +A   +   A NP  +     S +  RSE    +++ P
Sbjct: 754508 EQERDKVVPMQSSGSLRTAPSASATPHV*R-AHNPKRIY----SCMKCRSE---RHSSNP 754663

Query: 188    GDALVLTKPLGTQLA 202
                +LV ++PLG++++
Sbjct: 754664 HSSLV-SEPLGSKMS 754705


>supercontig_1.6 of Capsaspora owczarzaki ATCC 30864
          Length = 1617845

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -1

Query: 86      LIDDPFMLGKIALANVVSDVFAVGATEIDQIKLIVTAPT 124
               L D+P  L + AL  +++  F+ G++ +D  +L  TAP+
Sbjct: 1036802 LADNPLDLSENALLRMLAAAFSFGSSRLDLERLTSTAPS 1036686


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,492,369
Number of Sequences: 89
Number of extensions: 173135
Number of successful extensions: 951
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 274
length of query: 369
length of database: 9,347,932
effective HSP length: 101
effective length of query: 268
effective length of database: 9,338,943
effective search space: 2502836724
effective search space used: 2502836724
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)