TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000055_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Anopheles gambiae # Complete
         (396 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                   255   4e-68
supercontig_1.5 of Capsaspora owczarzaki ATCC 30864                    32   0.96 
supercontig_1.3 of Capsaspora owczarzaki ATCC 30864                    30   3.6  
supercontig_1.4 of Capsaspora owczarzaki ATCC 30864                    28   8.1  

>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score =  255 bits (651), Expect = 4e-68
 Identities = 148/298 (49%), Positives = 191/298 (64%), Gaps = 39/298 (13%)
 Frame = -2

Query: 120     GKIACANVLSDLYAMGVTEVDNMLMLLAVSTKMIEKERDVVIPLIMRGFKDSALEAGTSV 179
               G+IACANVLSDLYAMGV+E DNMLMLL VST +  +E  +V PL+M+GF D   EAGT+V
Sbjct: 1155365 GRIACANVLSDLYAMGVSECDNMLMLLGVSTTLTPEESVIVTPLVMKGFHDLCQEAGTNV 1155186

Query: 180     TGGHSVVNPWCTIGGVATTICQQNEFIVP----------------------------DNA 211
                GG +V NPW  +GGVAT++  ++E I+P                            D A
Sbjct: 1155185 LGGQTVKNPWFLLGGVATSVVGRHEMIMPGTRDNRASSCIFGHALSADLL*HSLDFTDGA 1155006

Query: 212     VVGDVLVLTKALGTQVAVNAHQW-LDQSERWNRIKLVVSEEDVRKAYHRAMDSMSRLNRV 270
                 GDVLVLTK LG Q+AVNAHQW L   ER+ R+  V++ E V +AY  A+ +M+RL+RV
Sbjct: 1155005 KSGDVLVLTKPLGNQLAVNAHQWMLTDPERYKRLDGVLTNEQVIEAYEHAITNMTRLSRV 1154826

Query: 271     AARLMHKYNAHGATDVTGFGLLGHAQTLASHQKNEVSFVIHNLPVIAKMAAVAKACGNMF 330
               AARLM ++ AH ATDVTGFG+LGHA+ LA  QK+ V+F I   PV+  M A+ +A   +F
Sbjct: 1154825 AARLMREFGAHAATDVTGFGILGHARNLARSQKDSVNFEIDVFPVLRHMIAMERAT-PVF 1154649

Query: 331     QLLQGHSAETSGGLLICL---------PREQAAAYCKDIEKQE-GCQAWIIGIVEKGS 378
                LL+G SAETSGGLLI L          R  A  YC ++ +Q+ G QA+IIG V +G+
Sbjct: 1154648 HLLEGTSAETSGGLLIALGPSPDGKLDARANAQRYCDELARQDRGFQAYIIGRVVEGT 1154475



 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 22/107 (20%)
 Frame = -2

Query: 23      RRPFDPTAHDLDASFRLTRFADLKGRCCKVPKEVLEKLV------------SSLQQDYMQ 70
               R+ F+P    L A +RLT+F  LKG  CKVP++ L KL+             S QQ    
Sbjct: 1155971 RKRFNPETLGLPADWRLTKFTQLKGCGCKVPQKDLLKLLEVFRANSNNAVAGSEQQIAAP 1155792

Query: 71      DPDQ----------PFMPMSSPRIGIGLDCSVIPLRHGGLCMVQTTD 107
                P            P    +   IG+GLD  V   RH GL +VQTTD
Sbjct: 1155791 TPTSGGAAVPASSIPAAITADGTIGVGLDSCVTETRHPGLYLVQTTD 1155651


>supercontig_1.5 of Capsaspora owczarzaki ATCC 30864
          Length = 1755934

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +3

Query: 128    LSDLYAMGVTEVDNMLMLLAVSTKMIEKERDVVIPLIMRGFKDSALEAGTSVTGGHSVVN 187
              L  L  +GV  V  ML+ LAV  ++  + R  V P+++RG K+  +       G H    
Sbjct: 349062 LQGLSELGVLVVARMLVHLAVDGRL*AR*RLAVCPVLIRGGKERGIVGSRHFDGSHRFAR 349241

Query: 188    PWCTIGGVATTI 199
                    GVAT +
Sbjct: 349242 V-----GVATVV 349262


>supercontig_1.3 of Capsaspora owczarzaki ATCC 30864
          Length = 2526540

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 223    LGTQVAVNAHQWLDQSERWNRIKLVVSEEDVRKAYHRAMDSMSRLNRVAARLMH 276
              +GTQ+AVN    +D+   W R++ V     + + +H   D    +  ++ +L+H
Sbjct: 163029 IGTQIAVNLVDAVDELVEWRRVRSVQHLCRINQLFHLVCD--FGITEISPKLLH 163184


>supercontig_1.4 of Capsaspora owczarzaki ATCC 30864
          Length = 2141673

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 51     KVPKEVLEKLVSSLQQDYMQDPDQPFMPMSSPR-IGIGLDCSV 92
              K  K+ +++L+ S +Q  +  P  PF+P ++PR    G  C +
Sbjct: 553925 KSKKKKIKRLLRSAKQTLVAPPPSPFVPCATPRQCSSGTQCRI 553797


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.322    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,919,876
Number of Sequences: 89
Number of extensions: 220378
Number of successful extensions: 1033
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 957
Number of HSP's gapped (non-prelim): 255
length of query: 396
length of database: 9,347,932
effective HSP length: 101
effective length of query: 295
effective length of database: 9,338,943
effective search space: 2754988185
effective search space used: 2754988185
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)