TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000032_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Homo sapiens # Complete
         (392 letters)

Database: B.hominis/genome.fa 
           54 sequences; 18,817,245 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|FN668651.1| Blastocystis hominis, Singapore isolate B (sub-t...   269   2e-72
emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-t...    31   1.1  
emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-t...    28   5.4  

>emb|FN668651.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome
              shotgun sequence assembly, scaffold_20
          Length = 315468

 Score =  269 bits (687), Expect = 2e-72
 Identities = 146/305 (47%), Positives = 190/305 (62%), Gaps = 12/305 (3%)
 Frame = +3

Query: 83     VQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMP 142
              + TTD+ YP VDDPY+ G+IA  NVLSD+YAMGVTE D MLM+LGVS  M     D V  
Sbjct: 201756 ISTTDFFYPSVDDPYVQGKIAACNVLSDMYAMGVTEVDTMLMILGVSVDMEPDAMDYVTK 201935

Query: 143    LIIQGFK-----------DAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNE-FIMPDN 190
               +I+GF            D A  A T+VTGGQTV NPW ++GGVA++ C+  E FI P +
Sbjct: 201936 ELIRGFNGFPFLSSL*RVDQARVAVTNVTGGQTVRNPWPMIGGVASSTCREGEDFIRPVH 202115

Query: 191    AVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRT 250
                PGDV+VLTKPLGTQ+AV + +WL    K+N+++ V++ EDV  +Y+ AM +M+ LN  
Sbjct: 202116 GEPGDVIVLTKPLGTQLAVNMFEWLRTAAKFNRVRAVLSVEDVVASYKMAMESMSTLNLE 202295

Query: 251    AAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMF 310
               A LM   +AH  TD+TGFG+ GHA NLA +Q   V  V+  LP++  MA V     N +
Sbjct: 202296 GARLMWKHHAHGCTDVTGFGVTGHATNLAAEQEKAVDLVVDTLPIIKNMARVESHLNNNW 202475

Query: 311    GLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKP 370
               L  G   ETSGGL+I +  E A    A IK  K   GH AWIIG V +G R   +++ P
Sbjct: 202476 NLFKGRSAETSGGLMIMMRPEDAE---AYIKEYKEITGHDAWIIGKVVEGQRKGYVVENP 202646

Query: 371    RIIEV 375
               +IEV
Sbjct: 202647 TLIEV 202661


>emb|FN668650.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome shotgun
               sequence assembly, scaffold_2
          Length = 1458350

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +2

Query: 207     VAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDI 266
               +A  +H  + + E W  +  V   + +      AMM    L R   G +    A    DI
Sbjct: 1019252 LANGLHALMQVEESWRGVCSVQAAKVLSNILNNAMMVADFLYRRGLGRIERLLAGKRDDI 1019431

Query: 267     TGFGILGHAQNLAKQQRNEV 286
               +G+ +LGH  N A     ++
Sbjct: 1019432 SGY-LLGHVMNCAMYSNEKI 1019488


>emb|FN668639.1| Blastocystis hominis, Singapore isolate B (sub-type 7) whole genome shotgun
               sequence assembly, scaffold_1
          Length = 1866585

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 134     DRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGV 175
               D++R  ++PL +QG +D A+      TGG+    PW++L  +
Sbjct: 1344557 DQKR**LLPLWLQGSQDKAQNQ----TGGEAPPPPWVLLASL 1344444


  Database: B.hominis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 18,817,245
  Number of sequences in database:  54
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,929,703
Number of Sequences: 54
Number of extensions: 114718
Number of successful extensions: 525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 495
Number of HSP's gapped (non-prelim): 100
length of query: 392
length of database: 6,272,415
effective HSP length: 99
effective length of query: 293
effective length of database: 6,267,069
effective search space: 1836251217
effective search space used: 1836251217
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)