TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000016_1.0 # Protein # Selenoprotein K (SelK) # Homo
sapiens # Complete
         (94 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01003031.1| Ascogregarina taiwanensis Contig3362, whole g...    26   0.75 
gb|ABJQ01002289.1| Ascogregarina taiwanensis Contig2584, whole g...    26   0.75 
gb|ABJQ01002547.1| Ascogregarina taiwanensis Contig2854, whole g...    23   4.8  

>gb|ABJQ01003031.1| Ascogregarina taiwanensis Contig3362, whole genome shotgun sequence
          Length = 2066

 Score = 26.2 bits (56), Expect = 0.75
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 24   TDFFWGIAEFVVLFFKTL 41
            T+F W IAE V+ + KT+
Sbjct: 1523 TEFIWSIAEIVMAYLKTM 1470


>gb|ABJQ01002289.1| Ascogregarina taiwanensis Contig2584, whole genome shotgun sequence
          Length = 1422

 Score = 26.2 bits (56), Expect = 0.75
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 24   TDFFWGIAEFVVLFFKTL 41
            T+F W IAE V+ + KT+
Sbjct: 1357 TEFIWSIAEIVMAYLKTM 1410


>gb|ABJQ01002547.1| Ascogregarina taiwanensis Contig2854, whole genome shotgun sequence
          Length = 1830

 Score = 23.5 bits (49), Expect = 4.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 12   SRSQSPWRLSLITDFFWGIAEFVV 35
            SR Q  WR   I +F  GIA+ ++
Sbjct: 1515 SRLQQRWRTRTIAEFA*GIADIIL 1586


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.325    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,628
Number of Sequences: 5379
Number of extensions: 4365
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of query: 94
length of database: 2,049,803
effective HSP length: 64
effective length of query: 30
effective length of database: 1,705,547
effective search space: 51166410
effective search space used: 51166410
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)