TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|70870239|gb|AAHK01001632.1|:subseq(1423,2260) Trypanosoma cruzi strain CL Brener tcruzi_1047053508727, whole genome shotgun sequence:[translate(1)] (89 letters) Database: A.taiwanensis/genome.fa 5379 sequences; 6,149,411 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABJQ01003129.1| Ascogregarina taiwanensis Contig3462, whole g... 28 0.25 gb|ABJQ01003299.1| Ascogregarina taiwanensis Contig3634, whole g... 27 0.33 gb|ABJQ01004229.1| Ascogregarina taiwanensis CLRanP78-E06.g1.ab1... 27 0.56 gb|ABJQ01002677.1| Ascogregarina taiwanensis Contig2990, whole g... 27 0.56 gb|ABJQ01003428.1| Ascogregarina taiwanensis Contig3771, whole g... 24 2.8 gb|ABJQ01003393.1| Ascogregarina taiwanensis Contig3733, whole g... 24 2.8 gb|ABJQ01001217.1| Ascogregarina taiwanensis Contig1404, whole g... 24 2.8 gb|ABJQ01000937.1| Ascogregarina taiwanensis Contig1085, whole g... 24 2.8 gb|ABJQ01004388.1| Ascogregarina taiwanensis CLRanP149-F05.g1.ab... 24 3.6 gb|ABJQ01003072.1| Ascogregarina taiwanensis Contig3405, whole g... 24 3.6 gb|ABJQ01002983.1| Ascogregarina taiwanensis Contig3312, whole g... 24 3.6 gb|ABJQ01000592.1| Ascogregarina taiwanensis Contig706, whole ge... 23 4.7 gb|ABJQ01005136.1| Ascogregarina taiwanensis CLEcoP12-F12.g1.095... 23 6.2 gb|ABJQ01003360.1| Ascogregarina taiwanensis Contig3699, whole g... 23 6.2 gb|ABJQ01003339.1| Ascogregarina taiwanensis Contig3676, whole g... 23 6.2 gb|ABJQ01003219.1| Ascogregarina taiwanensis Contig3553, whole g... 23 6.2 gb|ABJQ01001094.1| Ascogregarina taiwanensis Contig1258, whole g... 23 6.2 gb|ABJQ01000573.1| Ascogregarina taiwanensis Contig685, whole ge... 23 8.1 >gb|ABJQ01003129.1| Ascogregarina taiwanensis Contig3462, whole genome shotgun sequence Length = 1057 Score = 27.7 bits (60), Expect = 0.25 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Frame = -1 Query: 56 PFGGGRSVGHAP------RGPNIHGLPKGSLTGGCATGUR 89 P GGGR GH P RG +HG P TG G R Sbjct: 772 PTGGGRGRGHGPALGRWARGARLHG-PGAGRTGRTWPGER 656 >gb|ABJQ01003299.1| Ascogregarina taiwanensis Contig3634, whole genome shotgun sequence Length = 872 Score = 27.3 bits (59), Expect = 0.33 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 43 QHVQEYRSTTRIVPFGGGRSVGHAPRGPNIHGLPKGSLTGGCATG 87 +H + R+ +P GGG S+ AP P G TG CA G Sbjct: 542 RHPRTDRAGPIPLPCGGGGSIAWAPPARPQATSPPGGGTGPCALG 676 >gb|ABJQ01004229.1| Ascogregarina taiwanensis CLRanP78-E06.g1.ab1, whole genome shotgun sequence Length = 890 Score = 26.6 bits (57), Expect = 0.56 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 20 FFLSILRLMWLFFATLVSSEPV 41 FFLS LR +W F ++ S P+ Sbjct: 68 FFLSYLRFLWQAFVFVMGSRPI 3 >gb|ABJQ01002677.1| Ascogregarina taiwanensis Contig2990, whole genome shotgun sequence Length = 560 Score = 26.6 bits (57), Expect = 0.56 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +2 Query: 58 GGGRSVGHAPRGPNIHGLPKGSLTGG 83 GG + H RG HG P+G GG Sbjct: 350 GGPPAAPHGARGGGTHGRPRGPPAGG 427 >gb|ABJQ01003428.1| Ascogregarina taiwanensis Contig3771, whole genome shotgun sequence Length = 2833 Score = 24.3 bits (51), Expect = 2.8 Identities = 10/34 (29%), Positives = 16/34 (47%) Frame = +1 Query: 44 HVQEYRSTTRIVPFGGGRSVGHAPRGPNIHGLPK 77 H+ E + +GGG + AP G + LP+ Sbjct: 133 HMGEGEGRRELCRYGGGAAAYAAPSGQPVRSLPR 234 Score = 22.7 bits (47), Expect = 8.1 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 Query: 56 PFGGGRSVGHAPRG 69 P+GGG +V APRG Sbjct: 241 PWGGGGTVRAAPRG 200 >gb|ABJQ01003393.1| Ascogregarina taiwanensis Contig3733, whole genome shotgun sequence Length = 850 Score = 24.3 bits (51), Expect = 2.8 Identities = 10/34 (29%), Positives = 16/34 (47%) Frame = +2 Query: 44 HVQEYRSTTRIVPFGGGRSVGHAPRGPNIHGLPK 77 H+ E + +GGG + AP G + LP+ Sbjct: 506 HMGEGEGRRELCRYGGGAAAYAAPSGQPVRSLPR 607 Score = 22.7 bits (47), Expect = 8.1 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -3 Query: 56 PFGGGRSVGHAPRG 69 P+GGG +V APRG Sbjct: 614 PWGGGGTVRAAPRG 573 >gb|ABJQ01001217.1| Ascogregarina taiwanensis Contig1404, whole genome shotgun sequence Length = 1096 Score = 24.3 bits (51), Expect = 2.8 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = -1 Query: 61 RSVGHAPR----GPNIHGLPKGSLTGGCATG 87 R++GH GP+++G KG GG ATG Sbjct: 790 RNIGHRHNSPLVGPSMYGGIKGLKHGGYATG 698 >gb|ABJQ01000937.1| Ascogregarina taiwanensis Contig1085, whole genome shotgun sequence Length = 1770 Score = 24.3 bits (51), Expect = 2.8 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -3 Query: 40 PVSQHVQEYRSTTRIVPFGGGRSVGHAP 67 P QH+Q +R + RS GH P Sbjct: 211 PTCQHMQRHRRVRELYSGSRSRSSGHFP 128 >gb|ABJQ01004388.1| Ascogregarina taiwanensis CLRanP149-F05.g1.ab1, whole genome shotgun sequence Length = 845 Score = 23.9 bits (50), Expect = 3.6 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = -2 Query: 66 APRGPNIHGLPKGSLTGGCATG 87 AP P G P GSL GGC G Sbjct: 268 APFSP---GTPNGSLVGGC*NG 212 >gb|ABJQ01003072.1| Ascogregarina taiwanensis Contig3405, whole genome shotgun sequence Length = 1935 Score = 23.9 bits (50), Expect = 3.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 7 GRVVDSKPFSLVDFFLSILRLMWLFF 32 GRV PF+ V FL I +L+ FF Sbjct: 1034 GRVHRRPPFNEVHTFLKIFQLLCCFF 1111 >gb|ABJQ01002983.1| Ascogregarina taiwanensis Contig3312, whole genome shotgun sequence Length = 2392 Score = 23.9 bits (50), Expect = 3.6 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Frame = -1 Query: 34 TLVSSEPVSQHVQEYRSTTRIVPFGGGRSVGHAPR-----GPNIHGLPKGSLTGGC 84 TL +P H+Q Y S +PF R + N +P S+TG C Sbjct: 661 TLSHMQPTCMHMQRYSSDMSWLPFSLKRPATAGVKVKRF*QKNPREVPYSSITGCC 494 >gb|ABJQ01000592.1| Ascogregarina taiwanensis Contig706, whole genome shotgun sequence Length = 813 Score = 23.5 bits (49), Expect = 4.7 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 4 VANGRVVDSKPFSLVDFFLSILRL 27 +ANGR+ P SLV L+I+ L Sbjct: 312 LANGRIGHGMPLSLVGVTLNIIAL 241 >gb|ABJQ01005136.1| Ascogregarina taiwanensis CLEcoP12-F12.g1.095.ab1, whole genome shotgun sequence Length = 732 Score = 23.1 bits (48), Expect = 6.2 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2 Query: 29 WLFFATLVSSEP 40 WLF+ TLV+S P Sbjct: 341 WLFYLTLVTSSP 376 >gb|ABJQ01003360.1| Ascogregarina taiwanensis Contig3699, whole genome shotgun sequence Length = 1027 Score = 23.1 bits (48), Expect = 6.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 56 PFGGGRSVGHAPRGPNIHGLPKGSLTG 82 P GG G A GP+IHG G +G Sbjct: 915 PRGGHGGEGGARIGPSIHGRGGGGGSG 995 >gb|ABJQ01003339.1| Ascogregarina taiwanensis Contig3676, whole genome shotgun sequence Length = 1787 Score = 23.1 bits (48), Expect = 6.2 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 3/25 (12%) Frame = -1 Query: 54 IVPFGGGRSVGHAPRGP---NIHGL 75 I P GGGR H+ GP + HG+ Sbjct: 1265 IHPMGGGRPPPHSATGPHCASAHGM 1191 Score = 23.1 bits (48), Expect = 6.2 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 3/25 (12%) Frame = -2 Query: 54 IVPFGGGRSVGHAPRGP---NIHGL 75 I P GGGR H+ GP + HG+ Sbjct: 469 IHPMGGGRPPPHSATGPHCASAHGM 395 >gb|ABJQ01003219.1| Ascogregarina taiwanensis Contig3553, whole genome shotgun sequence Length = 2369 Score = 23.1 bits (48), Expect = 6.2 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +2 Query: 70 PNIHGLPKGSLT 81 P +HGLP GS T Sbjct: 2234 PQVHGLPNGSQT 2269 >gb|ABJQ01001094.1| Ascogregarina taiwanensis Contig1258, whole genome shotgun sequence Length = 1128 Score = 23.1 bits (48), Expect = 6.2 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -2 Query: 2 PYVANGRVVDSKPFSLVDFFLS 23 P+V R+V + S V+FF+S Sbjct: 941 PFVLGRRIVQKQQHSAVEFFVS 876 >gb|ABJQ01000573.1| Ascogregarina taiwanensis Contig685, whole genome shotgun sequence Length = 459 Score = 22.7 bits (47), Expect = 8.1 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 7 GRVVDSKPFSLVDFFLSILRL 27 GR + F V FFLS+LRL Sbjct: 246 GRGITCHFFFTVSFFLSVLRL 308 Database: A.taiwanensis/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 6,149,411 Number of sequences in database: 5379 Lambda K H 0.323 0.141 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 713,066 Number of Sequences: 5379 Number of extensions: 9389 Number of successful extensions: 87 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 87 length of query: 89 length of database: 2,049,803 effective HSP length: 60 effective length of query: 29 effective length of database: 1,727,063 effective search space: 50084827 effective search space used: 50084827 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 46 (22.3 bits)